A new blue-pigmented hasleoid diatom, Haslea provincialis, from the Mediterranean Sea

References

• Audzijonyte, A., Daneliya, M.E., Mugue, N. & Väonölä, R. (2008). Phylogeny of Paramysis (Crustacea: Mysida) and the origin of Ponto-Caspian endemic diversity: resolving power from nuclear protein-coding genes. Molecular Phylogenetics and Evolution, 46: 738–759.
   PubMed Web of Science ®Google Scholar
• Barone, R. (1979). La diatomee bentoniche del porto di Palermo. Giornale Botanico Italiano, 3: 187–295.
   Google Scholar
• Bory de Saint-Vincent, J.B. (1824). Encyclopédie méthodique. Agasse, Paris.
   Google Scholar
• Casteleyn, G., Leliaert, F., Backeljau, T., Debeer, A.E., Kotaki, Y., Rhodes, L., Lundholm, N., Sabbe, K. & Vyverman, W. (2010). Limits to gene flow in a cosmopolitan marine planktonic diatom. Proceedings of the National Academy of Sciences USA, 107: 12952–12957.
   PubMed Web of Science ®Google Scholar
• Cavazza, W. & Wezel, F.C. (2003). The Mediterranean region – a geological primer. Episodes, 26: 160–168.
   Web of Science ®Google Scholar
• Cermeño, P. & Falkowski, P.G. (2009). Controls on diatom biogeography in the ocean. Science, 325: 1539–1541.
   PubMed Web of Science ®Google Scholar
• Chepurnov, V.A. (1993). Polovoj protsess u dvudomnoj vodorosli Haslea subagnita (Pr.-Lavr.) Makar. et Kar. (Bacillariophyta). Algologiya, 3: 37–40.
   Google Scholar
• Chepurnov, V.A. & Roschin, A.M. (1995). Inbreeding influence on sexual reproduction of Achnantes longipes Ag. (Bacillariophyta). Diatom Research, 10: 21–29.
   Google Scholar
• Chepurnov, V.A., Mann, D.G., Vyverman, W., Sabbe, K. & Danielidis, D.B. (2002). Sexual reproduction, mating system, and protoplast dynamics of Seminavis (Bacillariophyceae). Journal of Phycology, 38: 1004–1019.
   Web of Science ®Google Scholar
• Chepurnov, V.A., Mann, D.G., Sabbe, K. & Vyverman, W. (2004). Experimental studies on sexual reproduction in diatoms. International Review of Cytology, 237: 91–154.
   PubMed Web of Science ®Google Scholar
• Chepurnov, V.A., Mann, D.G., Sabbe, K., Vannerum, K., Casteleyn, G., Verleyen, E., Peperzak, L. & Vyverman, W. (2005). Sexual reproduction, mating system, chloroplast dynamics and abrupt cell size reduction in Pseudo-nitzschia pungens from the North Sea (Bacillariophyta). European Journal of Phycology, 40: 379–395.
   Web of Science ®Google Scholar
• Darriba, D., Taboada, G.L., Doallo, R. & Posada, D. (2012). jModelTest 2: more models, new heuristics and parallel computing. Nature Methods, 9: 772.
   PubMed Web of Science ®Google Scholar
• Daugbjerg, N. & Andersen, R.A. (1997). A molecular phylogeny of the heterokont algae based on analyses of chloroplast encoded rbcL sequence data. Journal of Phycology, 33: 1031–1041.
   Web of Science ®Google Scholar
• Davidovich, N.A. (2001). Species specific sizes and size range of sexual reproduction in diatoms. In Proceedings of the 16th International Diatom Symposium (Economou-Amilli, A., editor), 191–196. Amvrosiou Press, Athens.
   Google Scholar
• Davidovich, N.A., Mouget, J.L. & Gaudin, P. (2009). Heterothallism in the pennate diatom Haslea ostrearia (Bacillariophyta). European Journal of Phycology, 44: 251–261.
   Web of Science ®Google Scholar
• Davidovich, N.A., Gastineau, R., Gaudin, P., Davidovich, O.I. & Mouget, J.L. (2012a). Sexual reproduction in the newly-described blue diatom, Haslea karadagensis. Fottea, 12: 219–229.
   Web of Science ®Google Scholar
• Davidovich, N.A., Kaczmarska, I., Karpov, S.A., Davidovich, O.I., MacGillivary, M.L. & Mather, L. (2012b). Mechanism of male gamete motility in araphid pennate diatoms from the genus Tabularia (Bacillariophyta). Protist, 163: 480–494.
   PubMed Web of Science ®Google Scholar
• De Vargas, C., Norris, R., Zaninetti, L., Gibb, S.W. & Pawlowski, J. (1999). Molecular evidence of cryptic speciation in planktonic foraminifers and their relation to oceanic provinces. Proceedings of the National Academy of Sciences USA, 96: 2864–2868.
   PubMed Web of Science ®Google Scholar
• Doyle, J.J. & Doyle, J.L. (1990). Isolation of plant DNA from fresh tissue. Focus, 12: 13–15.
   Google Scholar
• Edgar, R., Drolet, D., Ehrman, J.M. & Kaczmarska, I. (2014). Motile male gametes of the araphid diatom Tabularia fasciculata search randomly for mates. PLoS ONE 9(7): e101767. doi: 10.1371/journal.pone.0101767.
   Google Scholar
• Evans, K.M., Wortley, A.H. & Mann, D.G. (2007). An assessment of potential diatom “barcode” genes (cox1, rbcL, 18S and ITS rDNA) and their effectiveness in determining relationships in Sellaphora (Bacillariophyta). Protist, 158: 349–364.
   PubMed Web of Science ®Google Scholar
• Faria, R., Weiss, S. & Alexandrino, P. (2006). A molecular phylogenetic perspective on the evolutionary history of Alosa spp. (Clupeidae). Molecular Phylogenetics and Evolution, 40: 298–304.
   PubMed Web of Science ®Google Scholar
• Fuller, R.C., McGhee, K.E. & Schrader, M. (2007). Speciation in killifish and the role of salt tolerance. Journal of Evolutionary Biology, 20: 1962–1975.
   PubMed Web of Science ®Google Scholar
• Funk, G. (1919). Notizen über Meeresdiatomeen. Berichte der Deutschen Botanischen Gesellschaft, 37: 187–192.
   Google Scholar
• Gaillon, B. (1820). Des huîtres vertes, et des causes de cette coloration. Journal de Physique, de Chimie, d’Histoire Naturelle et des Arts, 91: 222–225.
   Google Scholar
• Gastineau, R., Davidovich, N.A., Bardeau, J.-F., Caruso, A., Leignel, V., Hardivillier, Y., Jacquette, B., Davidovich, O., Rincé, Y., Gaudin, P., Cox, E. & Mouget, J.-L. (2012). Haslea karadagensis (Bacillariophyta): a second blue diatom, recorded from the Black Sea and producing a novel blue pigment. European Journal of Phycology, 47: 469–479.
   Web of Science ®Google Scholar
• Gastineau, R., Leignel, V., Jacquette, B., Bendahmane, D., Hardivillier, Y., Wulff, A., Gaudin P., Kaczmarska, I., Davidovich, N. A. & Mouget, J.-L. (2013). Inheritance of mitochondrial DNA in the pennate diatom Haslea ostrearia (Naviculaceae) during auxosporulation suggests a uniparental transmission. Protist, 164: 340–351.
   PubMed Web of Science ®Google Scholar
• Gastineau, R., Davidovich, N.A., Hansen, G., Rines, J., Wulff, A., Kaczmarska, I., Ehrman, J., Hermann, D., Maumus, F., Hardivillier, Y., Leignel, V., Jacquette, B., Méléder, V., Hallegraeff, G., Yallop, M., Perkins, R., Cadoret, J.-P., Saint-Jean, B., Carrier, G. & Mouget, J.-L. (2014). Haslea ostrearia-like diatoms: biodiversity out of the blue. Advances in Botanical Research, 71: 441–446.
   Web of Science ®Google Scholar
• Geitler, L. (1973). Auxosporenbildung und Systematik bei pennaten Diatomeen und die Cytologie von Cocconeis-Sippen. Österreichische Botanische Zeitschrift, 122: 299–321.
   Google Scholar
• Giovannoni, S. & Nemergut, D. (2014). Microbes ride the current. Science, 345: 1246–1247.
   PubMed Web of Science ®Google Scholar
• Guindon, S. & Gascuel, O. (2003). A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systematic Biology, 52: 696–704.
   PubMed Web of Science ®Google Scholar
• Hamsher, S.E., Evans, K.M., Mann, D.G., Poulíčková, A. & Saunders, G.W. (2011). Barcoding diatoms: exploring alternatives to COI-5P. Protist, 162: 405–422.
   PubMed Web of Science ®Google Scholar
• Hellweger, F.L., van Sebille, E. & Fredrick, N.D. (2014). Biogeographic patterns in ocean microbes emerge in a neutral agent-based model. Science, 345: 1346–1349.
   PubMed Web of Science ®Google Scholar
• Höfler, K., Url, W. & Diskus, A. (1956). Zellphysiologie Beobachtungen und Versuche an Algen der Lagune von Venedig. Bollettino del Museo civico di Storia Naturale di Venezia, 9: 63–94.
   Google Scholar
• Hsü, K.J., Montadert, L., Bernoulli, D., Cita, M.B., Erickson, A., Garrison, R.E., Kidd, R.B., Mèlierés, F., Müller, C. & Wright, R. (1977). History of the Mediterranean salinity crisis. Nature, 267: 399–403.
   Web of Science ®Google Scholar
• Jesse, R., Grudinski, M., Klaus, S., Streit, B. & Pfenninger, M. (2011). Evolution of freshwater crab diversity in the Aegean region (Crustacea: Brachyura: Potamidae). Molecular Phylogenetics and Evolution, 59: 23–33.
   PubMed Web of Science ®Google Scholar
• Jones, H.M., Simpson, G.E., Stickle, A.J. & Mann, D.G. (2005). Life history and systematics of Petroneis (Bacillariophyta) with special reference to British waters. European Journal of Phycology, 40: 61–87.
   Web of Science ®Google Scholar
• Kaczmarska, I., LeGresley, M.M., Martin, J.L. & Ehrman, J.M. (2005). Diversity of the diatom genus Pseudo-nitzschia Peragallo in the Quoddy region of the Bay of Fundy, Canada. Harmful Algae, 4: 1–19.
   Web of Science ®Google Scholar
• Kaczmarska, I., Ehrman, J.M., Moniz, M.B.J. & Davidovich, N.A. (2009). Phenotypic and genetic structure of interbreeding populations of the diatom Tabularia fasciculata (Bacillariophyta). Phycologia, 48: 391–403.
   Web of Science ®Google Scholar
• Koch, T.A. & Ekelund, F. (2005). Strains of the heterotrophic flagellate Bodo designis from different environments vary considerably with respect to salinity preference and SSU rRNA gene composition. Protist, 156: 97–112.
   PubMed Web of Science ®Google Scholar
• Lankester, E.R. (1886). On green oysters. Quarterly Journal of Microscopical Science, 26: 71–94.
   Google Scholar
• Luddington, I.A., Kaczmarska, I. & Lovejoy, C. (2012). Distance and character-based evaluation of the V4 region of the 18S rRNA gene for the identification of diatoms (Bacillariophyceae). PLoS ONE, 7(9): e45664. doi:10.1371/journal.pone.0045664.
   PubMed Web of Science ®Google Scholar
• MacGillivary, M.L. & Kaczmarska, I. (2011). Survey of the efficacy of a short fragment of the rbcL gene as a supplemental DNA barcode for diatoms. Journal of Eukaryotic Microbiology, 58: 529–536.
   PubMed Web of Science ®Google Scholar
• Madkour, F.A., Dorgham, M.M., Hanafi, M.H. & Holligan, P.M. (2007). Comprehensive hydro-biological observations on the Suez Canal. International Journal of Oceans and Oceanography, 2: 125–137.
   Google Scholar
• Mäkinen, H.S. & Merilä, J. (2008). Mitochondrial DNA phylogeography of the three-spined stickleback (Gasterosteus aculeatus) in Europe – evidence for multiple glacial refugia. Molecular Phylogenetics and Evolution, 46: 167–182.
   PubMed Web of Science ®Google Scholar
• Mann, D.G. (1994). Auxospore formation, reproductive plasticity and cell structure in Navicula ulvacea and the resurrection of the genus Dickieia (Bacillariophyta). European Journal of Phycology, 29: 141–157.
   Web of Science ®Google Scholar
• Mann, D.G. & Vanormelingen, P. (2013). An inordinate fondness? The number, distributions and origins of diatom species. Journal of Eukaryotic Microbiology, 60: 414–420.
   PubMed Web of Science ®Google Scholar
• Mann, D.G., Sato, S., Trobajo, R., Vanormelingen, P. & Souffreau, C. (2010). DNA barcoding for species identification and discovery in diatoms. Cryptogamie Algologie, 31: 557–577.
   Web of Science ®Google Scholar
• Massé, G., Rincé, Y., Cox, E.J., Allard, G., Belt, S.T. & Rowland, S.J. (2001). Haslea salstonica sp. nov. and Haslea pseudostrearia sp. nov. (Bacillariophyta), two new epibenthic diatoms from the Kingsbridge estuary, United Kingdom. Comptes Rendus de l’Académie des Sciences de Paris, Sciences de la vie, 324: 617–626.
   Google Scholar
• Mejri, R., Arculeo, M., Ben Hassine, O.K. & Lo Brutto, S. (2011). Genetic architecture of the marbled goby Pomatoschistus marmoratus (Perciformes, Gobiidae) in the Mediterranean Sea. Molecular Phylogenetics and Evolution, 58: 395–403.
   PubMed Web of Science ®Google Scholar
• Mereschkowsky, K.S. (1903). K morfologii diatomovyh vodoroslej. Tipo-litografіya Imperatorskago Universiteta, Kazan.
   Google Scholar
• Molisch, H. (1903). Notiz über eine blaue Diatomee. Bericht der Deutschen botanischen Gesellschaft, 21: 23–26.
   Google Scholar
• Mouget, J.L., Gastineau, R., Davidovich, O., Gaudin, P. & Davidovich, N.A. (2009). Light is a key factor in triggering sexual reproduction in the pennate diatom Haslea ostrearia. FEMS Microbiology Ecology, 69: 194–201.
   PubMed Web of Science ®Google Scholar
• Nassiri, Y., Robert, J.-M., Rincé, Y. & Ginsburger-Vogel, T. (1998). The cytoplasmic fine structure of the diatom Haslea ostrearia (Bacillariophyceae) in relation to marennine production. Phycologia, 37: 84–91.
   Web of Science ®Google Scholar
• Neuville, D. & Daste, P. (1975). Observations préliminaires concernant l’auxosporulation chez la diatomée Navicula ostrearia (Gaillon) Bory en culture in vitro. Comptes Rendus de l’Academie des Sciences., 281 (Série D): 1753–1756.
   Google Scholar
• Neuville, D. & Daste, P. (1978). Recherches sur le déterminisme de la production de marennine par la diatomée marine Navicula ostrearia (Gaillon) Bory en culture in vitro. Revue générale de botanique, 85: 255–303.
   Google Scholar
• Neuville, D. & Daste, P. (1979). Observations concernant les phases de l’auxosporulation chez la diatomée Navicula ostrearia (Gaillon) Bory en culture in vitro. Comptes Rendus de l’Academie des Sciences, 288 ( Série D): 1496–1498.
   Google Scholar
• Perkins, R.G., Mouget, J.-L., Lefebvre, S. & Lavaud, J. (2006). Light response curve methodology and possible implications in the application of chlorophyll fluorescence to benthic diatoms. Marine Biology, 149: 703–712.
   Web of Science ®Google Scholar
• Poulíčková, A., Mayama, S., Chepurnov, V.A. & Mann, D.G. (2007). Heterothallic auxosporulation, incunabula and perizonium in Pinnularia (Bacillariophyceae). European Journal of Phycology, 42: 367–390.
   Web of Science ®Google Scholar
• Poulin, M., Massé, G., Belt, S.T., Delavault, P., Rousseau, F., Robert, J.M. & Rowland, S.J. (2004). Morphological, biochemical and molecular evidence for the transfer of Gyrosigma nipkowii Meister to the genus Haslea (Bacillariophyta). European Journal of Phycology, 39: 181–195.
   Web of Science ®Google Scholar
• Pouvreau J.B., Morançais, M., Fleury, F., Rosa, P., Thion, L., Cahingt, B., Zal, F., Fleurence, J. & Pondaven, P. (2006a). Preliminary characterisation of the blue-green pigment ‘‘marennine’’ from the tychopelagic diatom Haslea ostrearia (Gaillon/Bory) Simonsen. Journal of Applied Phycology, 18: 757–767.
   Web of Science ®Google Scholar
• Pouvreau, J.B., Morançais, M., Massé, G., Rosa, P., Robert, J.-M., Fleurence, J. & Pondaven, P. (2006b). Purification of the blue-green pigment “marennine” from the marine tychopelagic diatom Haslea ostrearia (Gaillon/Bory) Simonsen. Journal of Applied Phycology, 18: 769–781.
   Web of Science ®Google Scholar
• Proshkina-Lavrenko, A.I. (1963). Diatomovye vodorosli bentosa Chernogo moria. Akademii Nauk SSSR, Leningrad.
   Google Scholar
• Robert, J.-M. (1973). La diatomée Navicula ostrearia Bory en baie de Bourgneuf. Revue des Travaux de l’Institut des Pêches Maritimes, 37: 363–368.
   Google Scholar
• Robert, J.-M. (1974). Etude préliminaire des relations entre l’état de verdissement d’une claire ostréicole et l’examen biométrique de populations planctoniques et benthiques du Navicula ostrearia Bory, pigmenté; applications. Comptes Rendus de l’Académie des Sciences – Série D – Sciences Naturelles, 278: 1405–1408.
   Google Scholar
• Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012). MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61: 539–542.
   PubMed Web of Science ®Google Scholar
• Ross, R., Cox, E.J., Karayeva, N.I., Mann, D.G., Paddock, T.B.B., Simonsen, R. & Sims, P.A. (1979). An amended terminology for the siliceous components of the diatom cell. Nova Hedwigia, 64: 513–533.
   Google Scholar
• Round, F.E., Crawford, R.M. & Mann, D.G. (1990). The Diatoms. Biology and Morphology of the Genera. Cambridge University Press, Cambridge.
   Google Scholar
• Sato, S., Beakes, G., Idei, M., Nagumo, T. & Mann, D.G. (2011). Novel sex cells and evidence for sex pheromones in diatoms. PLoS ONE, 6(10): e26923. doi:10.1371/journal.pone.0026923.
   PubMed Web of Science ®Google Scholar
• Sauvageau, C. (1906). A propos de la présence de la diatomée bleue dans la Méditerranée. Travaux des laboratoires (Arcachon), 6: 46–59.
   Google Scholar
• Simonsen, R. (1974). The diatom plankton of the Indian Ocean expedition of RV “Meteor”. “Meteor” Forschungsergebnisse, Reihe D, 19: 46–49.
   Google Scholar
• Solazzi, A. & Tolomio, C. (1976). Il fitoplancton primaverile ed estivo lungo le coste settentrionali della Sardegna. Archivio di Oceanografia e Limnologia, 18: 389–409.
   Google Scholar
• Solazzi, A., Tolomio, C., Andreoli, C., Caniglia, G. & Colliva, V. (1972). La Laguna di Lesina (Foggia). Carico microfitico in un ciclo annuale. Memorie di Biogeografica Adriatica, 9: 1–42.
   Google Scholar
• Sprat, T. (1669). The history of the generation and ordering of green Oysters, commonly called Colchester Oysters. History of the Royal Society (London), 307–319.
   Google Scholar
• Sterrenburg, F.A.S., Tiffany, M.A., Hinz, F., Herwig, W.E. & Hargraves, P.E. (2015). Seven new species expand the morphological spectrum of Haslea. A comparison with Gyrosigma and Pleurosigma (Bacillariophyta). Phytotaxa, 207: 143–162.
   Google Scholar
• Talgatti, D., Sar, E.A. & Carvalho Torgan, L. (2014). Haslea sigma (Naviculaceae, Bacillariophyta) a new sigmoid benthic species from salt marshes of Southern Brazil. Phytotaxa, 177: 231–238.
   Web of Science ®Google Scholar
• Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013). MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution, 30: 2725–2729.
   PubMed Web of Science ®Google Scholar
• Tolomio, C. (1976). Variazioni stagionali e stazionali del firoplancton nella Laguna di Marano (Udine). Pubblicazioni della Stazione Zoologica di Napoli, 40: 133–237.
   Google Scholar
• Tolomio, C. (1978). Catalogo delle diatomee e delle peridinee più significative segnalate nelle acque salmastre italiane. Memorie di Biologia Marina e di Oceanografia, 8: 129–150.
   Google Scholar
• Tolomio, C. (1982). Ricerche sul fitoplancton e su alcuni fattori ambientali nella laguna di grado (Gorizia). Rivista di Idrobiologia, 21: 75–96.
   Google Scholar
• Tolomio, C. (1984). Osservazioni a breve termine sulla microflora pelagica estiva in due stazioni costiere nel Tirreno Settentrionale. Quaderni del Museo di Storia Naturale di Livorno, 5: 61–68.
   Google Scholar
• Tolomio, C. (1988). Il fitoplancton della valle di brenta (laguna veneta). Indagini stagionali: giugno 1980-marzo 1982. Archivio di Oceanografia e Limnologia, 21: 117–150.
   Google Scholar
• Tolomio, C. & Bullo, L. (2001a). Influenza delle maree di sizigie e di quadratura sulle comunità fitoplanctoniche del bacino di chioggia. Lavori Società Veneziana di Scienze Naturali, 26: 53–69.
   Google Scholar
• Tolomio, C. & Bullo, L. (2001b). Prelievi giornalieri di fitoplancton in una stazione del bacino meridionale della Laguna di Venezia. Bollettino del Museo Civico di Storia Naturale di Venezia, 52: 1–23.
   Google Scholar
• Vanormelingen, P., Chepurnov, V.A., Mann, D.G., Sabbe, K. & Vyverman, W. (2008a). Genetic divergence and reproductive barriers among morphologically heterogeneous sympatric clones of Eunotia bilunaris sensu lato (Bacillariophyta). Protist, 159: 73–90.
   PubMed Web of Science ®Google Scholar
• Vanormelingen, P., Verleyen, E., & Vyverman, W. (2008b). The diversity and distribution of diatoms: from cosmopolitanism to narrow endemism. Biodiversity and Conservation, 17: 393–405.
   Web of Science ®Google Scholar
• Vanormelingen, P., Evans, K.M., Chepurnov, V.A., Vyverman, W. & Mann, D.G. (2013). Molecular species discovery in the diatom Sellaphora and its congruence with mating trials. Fottea, 13: 133–148.
   Web of Science ®Google Scholar
• Von Karsten, G. (1897). Untersuchungen über Diatomeen. III. Flora, 83: 203–221.
   Google Scholar
• Whittaker, K.A., Rignanese, D.R., Olson, R.J. & Rynearson, T.A. (2012). Molecular subdivision of the marine diatom Thalassiosira rotula in relation to geographic distribution, genome size, and physiology. BMC Evolutionary Biology, 12: 209.
   PubMed Web of Science ®Google Scholar
• Wiens, J.T. (2004). What is speciation and how should we study it? American Naturalist, 163: 914–923.
   PubMed Web of Science ®Google Scholar
• Wraige, E.J., Belt, S.T., Massé, G., Robert, J.M. & Rowland, S.J. (1998). Variations in distributions of C25 highly branched isoprenoid (HBI) alkenes in the diatom, Haslea ostrearia: influence of salinity. Organic Geochemistry, 28: 855–859.
   Web of Science ®Google Scholar
• Zimmermann, J., Jahn, R. & Gemeinholzer, B. (2011). Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. Organisms, Diversity and Evolution, 11: 173–192.
   Google Scholar