Behavioural versus physiological photoprotection in epipelic and epipsammic benthic diatoms

References

• Admiraal, W. (1984). The ecology of estuarine sediment-inhabiting diatoms. Progress in Phycological Research, 3: 269–322.
   Google Scholar
• Aumeier, C. & Menzel, D. (2012). Secretion in the diatoms. In Secretions and Exudates in Biological Systems (Vivanco, J.M. & Baluška, F., editors), 221–250. Springer, Berlin.
   Google Scholar
• Bailleul, B., Rogato, A., De Martino, A., Coesel, S., Cardol, P., Bowler, C., Falciatore, A. & Finazzi, G. (2010). An atypical member of the light-harvesting complex stress-related protein family modulates diatom responses to light. Proceedings of the National Academy of Sciences of the USA, 107: 18214–18219.
   Google Scholar
• Barnett, A., Méléder, V., Blommaert, L., Lepetit, B., Gaudin, P., Vyverman, W., Sabbe, K., Dupuy, C. & Lavaud, J. (2015). Growth form defines physiological photoprotective capacity in intertidal benthic diatoms. The ISME Journal, 9: 32–45.
   PubMed Web of Science ®Google Scholar
• Blommaert, L., Huysman, M.J.J., Vyverman, W., Lavaud, J. & Sabbe, K. (2017). Contrasting NPQ dynamics and xanthophyll cycling in a motile and a non motile intertidal benthic diatom. Limnology and Oceanography, 62: 1466–1479..
   Web of Science ®Google Scholar
• Cartaxana, P., Ruivo, M., Hubas, C., Davidson, I., Serôdio, J. & Jesus, B. (2011). Physiological versus behavioral photoprotection in intertidal epipelic and epipsammic benthic diatom communities. Journal of Experimental Marine Biology and Ecology, 405: 120–127.
   Web of Science ®Google Scholar
• Cartaxana, P., Cruz, S., Gameiro, C. & Kühl, M. (2016a). Regulation of intertidal microphytobenthos photosynthesis over a diel emersion period is strongly affected by diatom migration patterns. Frontiers in Microbiology, 7: 872.
   PubMed Web of Science ®Google Scholar
• Cartaxana, P., Ribeiro, L., Goessling, J., Cruz, S. & Kühl., M. (2016b). Light and O2 microenvironments in two contrasting diatom-dominated coastal sediments. Marine Ecology Progress Series, 545: 35–47.
   Web of Science ®Google Scholar
• Chevalier, E.M., Gévaert, F. & Créach, A. (2010). In situ photosynthetic activity and xanthophylls cycle development of undisturbed microphytobenthos in an intertidal mudflat. Journal of Experimental Marine Biology and Ecology, 385: 44–49.
   Web of Science ®Google Scholar
• Cohn, S.A., Halpin, D., Hawley, N., Ismail, A., Kaplan, Z., Kordez, T., Kuhn, J., Macke, W., Marhaver, K., Ness, B., Olszewski, S., Rice, E., Sbarboro, J., Wolske, A. & Zapata, Y. (2015). Comparative analysis of light-stimulated motility responses in three diatom species. Diatom Research, 30: 213–225.
   Web of Science ®Google Scholar
• Consalvey, M., Paterson, D.M. & Underwood, G.J.C. (2004). The ups and downs of life in a benthic biofilm: migration of benthic diatoms. Diatom Research, 19: 181–202.
   Web of Science ®Google Scholar
• Cruz, S. & Serôdio, J. (2008). Relationship of rapid light curves of variable fluorescence to photoacclimation and non-photochemical quenching in a benthic diatom. Aquatic Botany, 88: 256–264.
   Web of Science ®Google Scholar
• Dimier, C., Giovanni, S., Ferdinando, T. & Brunet, C. (2009). Comparative ecophysiology of the xanthophyll cycle in six marine phytoplanktonic species. Protist, 160: 397–411.
   PubMed Web of Science ®Google Scholar
• Ezequiel, J., Laviale, M., Frankenbach, S., Cartaxana, P. & Serôdio, J. (2015). Photoacclimation state determines the photobehaviour of motile microalgae: the case of a benthic diatom. Journal of Experimental Marine Biology and Ecology, 468: 11–20.
   Web of Science ®Google Scholar
• Hamels, I., Sabbe, K., Muylaert, K., Barranguet, C., Lucas, C., Herman, P. & Vyverman, W. (1998). Organisation of microbenthic communities in intertidal estuarine flats, a case study from the Molenplaat (Westerschelde estuary, the Netherlands). European Journal of Protistology, 34: 308–320.
   Web of Science ®Google Scholar
• Hay, S.I., Maitland, T.C. & Paterson, D.M. (1993). The speed of diatom migration through natural and artificial substrata. Diatom Research, 8: 371–384.
   Google Scholar
• Jeffrey, S.W. & Humphrey, G.S. (1975). New spectrophotometric equations for determining chlorophylls a, b, c1 and c2 in higher plants, algae and natural phytoplankton. Biochemie und Physiology der Pflanzen, 167: 191–194.
   Web of Science ®Google Scholar
• Jesus, B., Brotas, V., Ribeiro, L., Mendes, C.R., Cartaxana, P. & Paterson, D.M. (2009). Adaptations of microphytobenthos assemblages to sediment type and tidal position. Continental Shelf Research, 29: 1624–1634.
   Web of Science ®Google Scholar
• Jewson, D.H., Lowry, S.F. & Bowen, R. (2006). Co-existence and survival of diatoms on sand grains. European Journal of Phycology, 41: 131–146.
   Web of Science ®Google Scholar
• Key, T., McCarthy, A., Campbell, D.A., Six, C., Roy, S. & Finkel, Z.V. (2010). Cell size trade-offs govern light exploitation strategies in marine phytoplankton. Environmental Microbiology, 12: 95–104.
   PubMed Web of Science ®Google Scholar
• Kromkamp, J.C., Barranguet, C. & Peene, J. (1998). Determination of microphytobenthos PSII quantum efficiency and photosynthetic activity by means of variable chlorophyll fluorescence. Marine Ecology Progress Series, 162: 45–55.
   Web of Science ®Google Scholar
• Kühl, M., Lassen, C. & Jorgensen, B.B. (1994). Light penetration and light intensity in sandy marine sediments measured with irradiance and scalar irradiance fiber-optic microprobes. Marine Ecology Progress Series, 105: 139–148.
   Web of Science ®Google Scholar
• Lavaud, J. & Goss, R. (2014). The peculiar features of the non-photochemical fluorescence quenching in diatoms and brown algae. In Non-Photochemical Quenching and Energy Dissipation in Plants, Algae and Cyanobacteria (Demmig-Adams, B., Garab, G., Adams III, W. & Govindjee, editors), 421–443. Springer, Dordrecht.
   Google Scholar
• Lavaud, J. & Lepetit, B. (2013). An explanation for the inter-species variability of the photoprotective non-photochemical chlorophyll fluorescence quenching in diatoms. Biochimica et Biophysica Acta, 1827: 294–302.
   PubMed Web of Science ®Google Scholar
• Lavaud, J., Rousseau, B., Van Gorkom, H. J. & Etienne, A. (2002). Influence of the diadinoxanthin pool size on photoprotection in the marine planktonic diatom Phaeodactylum tricornutum. Plant Physiology, 129: 1398–1406.
   PubMed Web of Science ®Google Scholar
• Lavaud, J., Strzepek, R.F. & Kroth, P.G. (2007). Photoprotection capacity differs among diatoms: possible consequences on the spatial distribution of diatoms related to fluctuations in the underwater light climate. Limnology and Oceanography, 52: 1188–1194.
   Web of Science ®Google Scholar
• Laviale, M., Barnett, A., Ezequiel, J., Lepetit, B., Frankenbach, S., Méléder, V., Serôdio, J. & Lavaud, J. (2015). Response of intertidal benthic microalgal biofilms to a coupled light-temperature stress: evidence for latitudinal adaptation along the Atlantic coast of Southern Europe. Environmental Microbiology, 17: 3662–3677.
   PubMed Web of Science ®Google Scholar
• Laviale, M., Frankenbach, S. & Serôdio, J. (2016). The importance of being fast: comparative kinetics of vertical migration and non-photochemical quenching of benthic diatoms under light stress. Marine Biology, 163: 10.
   Web of Science ®Google Scholar
• van Leeuwe, M., Brotas, V., Consalvey, M., Forster, R., Gillespie, D., Jesus, B., Roggeveld, J. & Gieskes, W. (2008). Photoacclimation in microphytobenthos and the role of xanthophyll pigments. European Journal of Phycology, 43: 123–132.
   Web of Science ®Google Scholar
• Litchman, E. & Klausmeier, C.A. (2008). Trait-based community ecology of phytoplankton. Annual Review of Ecology, Evolution, and Systematics, 39: 615–639.
   Web of Science ®Google Scholar
• Miller, A.R., Lowe, R.L. & Rotenberry, J.T. (1987). Succession of diatom communities on sand grains. Journal of Ecology, 75: 693–709.
   Web of Science ®Google Scholar
• Olaizola, M. & Yamamoto, H.Y. (1994). Short-term response of the diadinoxanthin cycle and fluorescence yield to high irradiance in Chaetoceros muelleri (Bacillariophyceae). Journal of Phycology, 30: 606–612.
   Web of Science ®Google Scholar
• Perkins, R.G., Kromkamp, J.C., Serôdio, J., Lavaud, J., Jesus, B., Mouget, J.L., Lefebvre, S. & Forster, R.M. (2010a). The application of variable chlorophyll fluorescence to microphytobenthic biofilms. In Chlorophyll a Fluorescence in Aquatic Sciences: Methods and Applications (Suggett, D.J., Prášil, O. & Borowitzka, M.A., editors), 237–275. Springer, Dordrecht.
   Google Scholar
• Perkins, R.G., J. Lavaud, J. Serôdio, Mouget, J.L., Cartaxana, P., Rosa, P., Barille, L., Brotas, V. & Jesus, B. (2010b). Vertical cell movement is a primary response of intertidal benthic biofilms to increasing light dose. Marine Ecology Progress Series, 416: 93–103.
   Web of Science ®Google Scholar
• Pniewski, F.F., Biskup, P., Bubak, I., Richard, P., Latała, A. & Blanchard, G. (2015). Photo-regulation in microphytobenthos from intertidal mudflats and non-tidal coastal shallows. Estuarine, Coastal and Shelf Science, 152: 153–161.
   Web of Science ®Google Scholar
• Raven, J.A. (2011). The cost of photoinhibition. Physiologia Plantarum, 142: 87–104.
   PubMed Web of Science ®Google Scholar
• Ribeiro, L., Brotas, V., Rincé, Y. & Jesus, B. (2013). Structure and diversity of intertidal benthic diatom assemblages in contrasting shores: a case study from the Tagus estuary. Journal of Phycology, 49: 258–270.
   PubMed Web of Science ®Google Scholar
• Round, F.E., Crawford, R.M. & Mann, D.G. (1990). The Diatoms – Biology and Morphology of the Genera. Cambridge University Press, Cambridge.
   Google Scholar
• Rouse, J.W., Jr, Haas, R.H., Schell, J.A. & Deering, D.W. (1974). Monitoring vegetation systems in the Great Plains with Erts. In Third Earth Resources Technology Satellite-1 Symposium – Volume I: Technical Presentations (Freden, S.C., Mercanti, E.P. & Becker, M. A., editors), 309–317. NASA, Washington, DC.
   Google Scholar
• Sabbe, K. (1993). Short-term fluctuations in benthic diatom numbers on an intertidal sandflat in the Westerschelde estuary (Zeeland, the Netherlands). Hydrobiologia, 269: 275–284.
   Web of Science ®Google Scholar
• Sabbe, K. (1997). Systematics and ecology of intertidal benthic diatoms of the Westerschelde estuary (The Netherlands). Ghent University.
   Google Scholar
• Sabbe, K., Witkowski, A. & Vyverman, W. (1995). Taxonomy, morphology and ecology of Biremis lucens comb. nov. (Bacillariophyta): a brackish-marine, benthic diatom species comprising different morphological types. Botanica Marina, 38: 379–391.
   Web of Science ®Google Scholar
• Serôdio, J., da Silva, J.M. & Catarino, F. (2001). Use of in vivo chlorophyll a fluorescence to quantify short-term variations in the productive biomass of intertidal microphytobenthos. Marine Ecology Progress Series, 218: 45–61.
   Google Scholar
• Serôdio, J., Cruz, S., Vieira, S. & Brotas, V. (2005). Non-photochemical quenching of chlorophyll fluorescence and operation of the xanthophyll cycle in estuarine microphytobenthos. Journal of Experimental Marine Biology and Ecology, 326: 157–169.
   Web of Science ®Google Scholar
• Serôdio, J., Vieira, S., Cruz, S. & Coelho, H. (2006). Rapid light-response curves of chlorophyll fluorescence in microalgae: relationship to steady-state light curves and non-photochemical quenching in benthic diatom-dominated assemblages. Photosynthesis Research, 90: 29–43.
   PubMed Web of Science ®Google Scholar
• Serôdio, J., Vieira, S. & Cruz, S. (2008). Photosynthetic activity, photoprotection and photoinhibition in intertidal microphytobenthos as studied in situ using variable chlorophyll fluorescence. Continental Shelf Research, 28: 1363–1375.
   Web of Science ®Google Scholar
• Serôdio, J., Ezequiel, J., Barnett, A., Mouget, J.L., Méléder, V., Laviale, M. & Lavaud. J. (2012). Efficiency of photoprotection in microphytobenthos: role of vertical migration and the xanthophyll cycle against photoinhibition. Aquatic Microbial Ecology, 67: 161–175.
   Web of Science ®Google Scholar
• Underwood, G.J.C., Perkins, R.G., Consalvey, M.C., Hanlon, A.R.M., Oxborough, K., Baker, N.R. & Paterson, D.M. (2005). Patterns in microphytobenthic primary productivity: species-specific variation in migratory rhythms and photosynthesis in mixed-species biofilms. Limnology and Oceanography, 50: 755–767.
   Web of Science ®Google Scholar
• Zhu, S., Guo, J., Maldonado, M.T. & Green, B.R. (2010). Effects of iron and copper deficiency on the expression of members of the light-harvesting family in the diatom Thalassiosira pseudonana (Bacillariophyceae). Journal of Phycology, 46: 974–981.
   Web of Science ®Google Scholar