Computational study of cell adhesion and rolling in flow channel by meshfree method

References

• Brooks SB, Tozeren A. 1996. Flow past an array of cells that are adherent to the bottom plate of a flow channel. Comput Fluids. 25:741–757.
   Web of Science ®Google Scholar
• Chang K-C, Hammer DA. 2000. Adhesive dynamics simulations of sialyl-Lewis x/E-selectin-mediated rolling in a cell-free system. Biophys J. 79:1891–1902.
   PubMed Web of Science ®Google Scholar
• Chapman GB, Cokelet GR. 1998. Flow resistance and drag forces due to multiple adherent leukocytes in postcapillary vessels. Biophys J. 74:3292–3301.
   PubMed Web of Science ®Google Scholar
• Chen S, Springer TA. 1999. An automatic braking system that stabilizes leukocyte rolling by an increase in selectin bond number with shear. J Cell Biol. 144:185–200.
   PubMed Web of Science ®Google Scholar
• Chung HH, Chan CK, Khire TS, Marsh GA, Clark A, Waugh RE, McGrath JL. 2014. Highly permeable silicon membranes for shear free chemotaxis and rapid cell labeling. Lab Chip. 14:2456–2468.
   PubMed Web of Science ®Google Scholar
• Dong C, Lei XX. 2000. Biomechanics of cell rolling: shear flow, cell-surface adhesion, and cell deformability. J Biomech. 33:35–43.
   PubMed Web of Science ®Google Scholar
• Fan H, Li S. 2015. Modeling universal dynamics of cell spreading on elastic substrates. Biomech Model Mechanobiol. 14:1265–1280.
   Web of Science ®Google Scholar
• Farsad M, Vernerey FJ. 2012. An XFEM-based numerical strategy to model mechanical interactions between biological cells and a deformable substrate. Int J Numer Methods Eng. 92:238–267.
   Web of Science ®Google Scholar
• Frascoli F, Hughes BD, Zaman MH, Landman KA. 2013. A computational model for collective cellular motion in three dimensions: general framework and case study for cell pair dynamics. PLoS One. 8:e59249.
   Google Scholar
• Fried I, Johnson AR. 1988. A note on elastic energy density functions for largely deformed compressible rubber solids. Comp Methods Appl Mech Eng. 69:53–64.
   Web of Science ®Google Scholar
• Gaver DP, Kute SM. 1998. A theoretical model study of the influence of fluid stresses on a cell adhering to a microchannel wall. Biophys J. 75:721–733.
   PubMed Web of Science ®Google Scholar
• Henry SJ, Crocker JC, Hammer DA. 2014. Ligand density elicits a phenotypic switch in human neutrophils. Integrative Biol. 6:348–356.
   PubMed Web of Science ®Google Scholar
• Henry SJ, Crocker JC, Hammer DA. 2016. Motile human neutrophils sense ligand density over their entire contact area. Ann Biomed Eng. 44:886–894.
   PubMed Web of Science ®Google Scholar
• Jadhav S, Eggleton CD, Konstantopoulos K. 2005. A 3-D computational model predicts that cell deformation affects selectin-mediated leukocyte rolling. Biophys J. 88:96–104.
   PubMed Web of Science ®Google Scholar
• Jean RP, Chen CS, Spector AA. 2005. Finite-element analysis of the adhesion-cytoskeleton-nucleus mechanotransduction pathway during endothelial cell rounding: axisymmetric model. J Biomech Eng. 127:594–600.
   PubMed Web of Science ®Google Scholar
• Khismatullin DB, Truskey GA. 2012. Leukocyte rolling on P-selectin: a three-dimensional numerical study of the effect of cytoplasmic viscosity. Biophys J. 102:1757–1766.
   PubMed Web of Science ®Google Scholar
• King MR, Hammer DA. 2001. Multiparticle adhesive dynamics. Interactions between stably rolling cells. Biophys J. 81:799–813.
   PubMed Web of Science ®Google Scholar
• Lämmermann T, Bader BL, Monkley SJ, Worbs T, Wedlich-Söldner R, Hirsch K, Keller M, Förster R, Critchley DR, Fässler R. 2008. Rapid leukocyte migration by integrin-independent flowing and squeezing. Nature. 453:51–55.
   PubMed Web of Science ®Google Scholar
• Lauffenburger DA, Linderman J. 1993. Receptors: models for binding, trafficking, and signaling. New York: Oxford University Press.
   Google Scholar
• Lawrence M, Dong C. 1999. Influence of cell deformation on leukocyte rolling adhesion in shear flow. J Biomechan Eng. 121:636–643.
   PubMed Web of Science ®Google Scholar
• Lawrence MB, Springer TA. 1991. Leukocytes roll on a selectin at physiologic flow rates: distinction from and prerequisite for adhesion through integrins. Cell. 65:859–873.
   PubMed Web of Science ®Google Scholar
• Li B, Sun SX. 2014. Coherent motions in confluent cell monolayer sheets. Biophys J. 107:1532–1541.
   PubMed Web of Science ®Google Scholar
• Li S, Liu WK. 2007. Meshfree particle methods. Berlin: Springer Science & Business Media.
   Google Scholar
• Liu P, Zhang Y, Cheng Q, Lu C. 2007. Simulations of the spreading of a vesicle on a substrate surface mediated by receptor–ligand binding. J Mech Phys Solids. 55:1166–1181.
   Web of Science ®Google Scholar
• Liu W-K, Li S, Belytschko T. 1997. Moving least-square reproducing kernel methods (I) methodology and convergence. Comput Methods Appl Mech Eng. 143:113–154.
   Web of Science ®Google Scholar
• Lucy LB. 1977. A numerical approach to the testing of the fission hypothesis. Astronom J. 82:1013–1024.
   Web of Science ®Google Scholar
• McCarty OJ, Tien N, Bochner BS, Konstantopoulos K. 2003. Exogenous eosinophil activation converts PSGL-1-dependent binding to CD18-dependent stable adhesion to platelets in shear flow. Am J Physiol-Cell Physiol. 284:C1223–C1234.
   PubMed Web of Science ®Google Scholar
• Monteiro E, Yvonnet J, He Q-C, Cardoso O, Asnacios A. 2011. Analyzing the interplay between single cell rheology and force generation through large deformation finite element models. Biomech Model Mechanobiol. 10:813–830.
   PubMed Web of Science ®Google Scholar
• Muller W. 2013. Getting leukocytes to the site of inflammation. Veterinary Pathol Online. 50:7–22.
   PubMed Web of Science ®Google Scholar
• Murai T, Sato C, Sato M, Nishiyama H, Suga M, Mio K, Kawashima H. 2013. Membrane cholesterol modulates the hyaluronan-binding ability of CD44 in T lymphocytes and controls rolling under shear flow. J Cell Sci. 126:3284–3294.
   PubMed Web of Science ®Google Scholar
• N’dri N, Shyy W, Tran-Son-Tay R. 2003. Computational modeling of cell adhesion and movement using a continuum-kinetics approach. Biophys J. 85:2273–2286.
   PubMed Web of Science ®Google Scholar
• Pappu V, Doddi SK, Bagchi P. 2008. A computational study of leukocyte adhesion and its effect on flow pattern in microvessels. J Theor Biol. 254:483–498.
   PubMed Web of Science ®Google Scholar
• Pawar P, Jadhav S, Eggleton CD, Konstantopoulos K. 2008. Roles of cell and microvillus deformation and receptor-ligand binding kinetics in cell rolling. Am J Physiol-Heart Circ Physiol. 295:H1439–H1450.
   PubMed Web of Science ®Google Scholar
• Ramachandran V, Williams M, Yago T, Schmidtke DW, McEver RP. 2004. Dynamic alterations of membrane tethers stabilize leukocyte rolling on P-selectin. Proc Nat Acad Sci USA. 101:13519–13524.
   PubMed Web of Science ®Google Scholar
• Ravetto A, Wyss HM, Anderson PD, den Toonder JM, Bouten CV. 2014. Monocytic cells become less compressible but more deformable upon activation. PloS one. 9:e92814.
   PubMed Web of Science ®Google Scholar
• Roy S, Qi HJ. 2010. A computational biomimetic study of cell crawling. Biomech Model Mechanobiol. 9:573–581.
   PubMed Web of Science ®Google Scholar
• Sauer RA, Li S. 2007. An atomic interaction-based continuum model for adhesive contact mechanics. Finite Elem Anal Des. 43:384–396.
   Web of Science ®Google Scholar
• Seifert U. 1991. Adhesion of vesicles in two dimensions. Phys Rev A. 43:6803–6814.
   PubMed Web of Science ®Google Scholar
• Shao J-Y, Ting-Beall HP, Hochmuth RM. 1998. Static and dynamic lengths of neutrophil microvilli. Proc Nat Acad Sci. 95:6797–6802.
   PubMed Web of Science ®Google Scholar
• Sheikh S, Nash GB. 1998. Treatment of neutrophils with cytochalasins converts rolling to stationary adhesion on P-selectin. J Cell Physiol. 174:206–216.
   PubMed Web of Science ®Google Scholar
• Simon SI, Green CE. 2005. Molecular mechanics and dynamics of leukocyte recruitment during inflammation. Annu Rev Biomed Eng. 7:151–185.
   PubMed Web of Science ®Google Scholar
• Somers WS, Tang J, Shaw GD, Camphausen RT. 2000. Insights into the molecular basis of leukocyte tethering and rolling revealed by structures of P-and E-selectin bound to SLe X and PSGL-1. Cell. 103:467–479.
   PubMed Web of Science ®Google Scholar
• Yago T, Leppänen A, Qiu H, Marcus WD, Nollert MU, Zhu C, Cummings RD, McEver RP. 2002. Distinct molecular and cellular contributions to stabilizing selectin-mediated rolling under flow. J Cell Biol. 158:787–799.
   PubMed Web of Science ®Google Scholar
• Zeng X, Li S. 2011a. Modelling and simulation of substrate elasticity sensing in stem cells. Comput Methods Biomech Biomed Eng. 14:447–458.
   PubMed Web of Science ®Google Scholar
• Zeng X, Li S. 2011b. Multiscale modeling and simulation of soft adhesion and contact of stem cells. J Mech Behav Biomed Materials. 4:180–189.
   PubMed Web of Science ®Google Scholar
• Zeng X, Li S. 2012. A three dimensional soft matter cell model for mechanotransduction. Soft Matter. 8:5765–5776.
   Web of Science ®Google Scholar
• Zeng X, Li S. 2013. Biomechanical cell model by liquid-crystal elastomers. J Eng Mech. 140:04013003.
   Web of Science ®Google Scholar
• Zhang L, Gerstenberger A, Wang X, Liu WK. 2004. Immersed finite element method. Comput Methods Appl Mech Eng. 193:2051–2067.
   Web of Science ®Google Scholar
• Zhu C. 2000. Kinetics and mechanics of cell adhesion. J Biomech. 33:23–33.
   PubMed Web of Science ®Google Scholar
• Zhu C, Bao G, Wang N. 2000. Cell mechanics: mechanical response, cell adhesion, and molecular deformation. Ann Rev Biomed Eng. 2:189–226.
   PubMed Web of Science ®Google Scholar