The Occurrence of Crude Oil-Degrading Bacteria in Some Sponges Collected at the Persian Gulf: Ecological Importance and Biotechnological Application

References

• Candice Brinkmann, Amberlee Marker, and D. Kurtböke, “An Overview on Marine Sponge-Symbiotic Bacteria as Unexhausted Sources for Natural Product Discovery,” Diversity 9, no. 4 (2017): 40–56.
   Google Scholar
• Q. Chen, J. Li, M. Liu, H. Sun, and M. Bao, “Study on the Biodegradation of Crude Oil by Free and Immobilized Bacterial Consortium in Marine Environment,” PloS One 12, no. 3 (2017): e0174445.
   PubMed Web of Science ®Google Scholar
• J. Selvin, A. Ninawe, G. Seghal Kiran, and A. Lipton, “Sponge-Microbial Interactions: Ecological Implications and Bioprospecting Avenues,” Critical Reviews in Microbiology 36, no. 1 (2010): 82–90.
   PubMed Web of Science ®Google Scholar
• N. F. Montalvo and R. T. Hill, “Sponge-Associated Bacteria are Strictly Maintained in Two Closely Related but Geographically Distant Sponge Hosts,” Applied and Environmental Microbiology 77, no. 20 (2011): 7207–16.
   PubMed Web of Science ®Google Scholar
• H. Ghanavati, G. Emtiazi, and M. Hassanshahian, “Synergism Effects of phenol-degrading yeast and Ammonia-Oxidizing Bacteria for Nitrification in Coke Wastewater of Esfahan Steel Company,” Waste Management & Research 26, no. 2 (2008): 203–8.
   PubMed Web of Science ®Google Scholar
• R. Simister, M. W. Taylor, K. M. Rogers, P. J. Schupp, and P. Deines, “Temporal Molecular and Isotopic Analysis of Active Bacterial Communities in Two New Zealand Sponges,” FEMS Microbiology Ecology 85, no. 1 (2013): 195–205.
   PubMed Web of Science ®Google Scholar
• M. F. Freeman, A. L. Vagstad, and J. Piel, “Polytheonamide Biosynthesis Showcasing the Metabolic Potential of sponge-associated uncultivated ‘Entotheonella’ bacteria,” Current Opinion in Chemical Biology 31 (2016): 8–14.
   PubMed Web of Science ®Google Scholar
• A. A. G. Indraningrat, H. Smidt, and D. Sipkema, “Bioprospecting Sponge-Associated Microbes for Antimicrobial Compounds,” Marine Drugs 14, no. 5 (2016): 87–98.
   PubMed Web of Science ®Google Scholar
• S. Cappello, M. Genovese, C. Della Torre, A. Crisari, M. Hassanshahian, S. Santisi, R. Calogero, and M. M. Yakimov, “Effect of Bioemulsificant Exopolysaccharide (EPS2003) on Microbial Community Dynamics During Assays of Oil Spill Bioremediation: A Microcosm Study,” Marine Pollution Bulletin 64, no. 12 (2012a): 2820–8.
   PubMed Web of Science ®Google Scholar
• A. C. Freitas, D. Rodrigues, T. A. Rocha-Santos, A. M. Gomes, and A. C. Duarte, “Marine Biotechnology Advances towards Applications in New Functional Foods,” Biotechnology Advances 30, no. 6 (2012): 1506–16.
   PubMed Web of Science ®Google Scholar
• M. Hassanshahian, M. S. Zeynalipour, and F. Hosseinzadeh Musa, “Isolation and Characterization of Crude Oil Degrading Bacteria from the Persian Gulf (Khorramshahr Provenance),”Marine Pollution Bulletin 82, no. 1–2 (2014): 39–44.
   PubMed Web of Science ®Google Scholar
• Simone Cappello, Daniela Russo, Santina Santisi, Rosario Calogero, Christoph Gertler, Francesca Crisafi, Mariolina De Domenico, and Michail M. Yakimov, “Presence of Hydrocarbon-Degrading Bacteria in the Gills of Mussel Mytilus Galloprovincialis in a Contaminated Environment: A Mesoscale Simulation Study,” Chemistry and Ecology 28, no. 3 (2012b): 239–52.
   Web of Science ®Google Scholar
• C. Fuchsluger, M. Preims, and I. Fritz, “Automated Measurement and Quantification of Heterotrophic Bacteria in Water Samples Based on the MPN Method,” Journal of Industrial Microbiology & Biotechnology 38, no. 1 (2011): 241–7.
   PubMed Web of Science ®Google Scholar
• M. Hasanshahian and G. Emtiazi, “Investigation of Alkane Biodegradation Using the Microtiter Plate Method and Correlation between Biofilm Formation, Biosurfactant Production and Crude Oil Biodegradation,” International BiodeteriorAtion and Biodegradation 62 (2008): 170–8.
   Web of Science ®Google Scholar
• K. G. Hanson, Jitendra D. Desai and Anjana J. Desai, “A rapid and simple screening technique for potential crude oil degrading microorganisms,” Biotechnology Techniques 7 (1993): 745–748.
   Google Scholar
• S. G. Holt, N. R. Kriey, P. H. A. Sneath, J. T. Staley, and S. T. Williams, Bergy’s Manual of Determinative for Bacteriology (Williams and Wilkins: New York, 1998.
   Google Scholar
• M. M. Yakimov, K. N. Timmis, and P. N. Golyshin, “Obligate Oil-Degrading Marine Bacteria,” Current Opinion in Biotechnology 18, no. 3 (2007): 257–66.
   PubMed Web of Science ®Google Scholar
• Rahman K., Thahira-Rahman J., P. Lakshmanaperumalsamy and I. Banat, “Towards efficient crude oil degradation by a mixed bacterial consortium,” Bioresour Technol 85 (2002):257–261.
   Google Scholar
• M. Karimi and M. Hassanshahian, “Isolation and Characterization of Phenol Degrading Yeasts from Wastewater in the Coking Plant of Zarand, Kerman,” Brazilian Journal of Microbiology 4, no. 7 (2016): 18–24.
   Google Scholar
• H. Tebyanian, M. Hassanshahian, and A. Kariminik, “Hexadecane-Degradation by Teskumurella and Stenotrophomonas Strains Isolated from Hydrocarbon Contaminated Soils,” Jundishapur Journal of Microbiology 26, no. 7 (2013): e9182.
   Google Scholar
• M. Hassanshahian and N. Amini, “Enrichment and Identification of Naphthalene-Degrading Bacteria from the Persian Gulf,” Marine Pollution Bulletin 107, no. 1 (2016): 59–65.
   PubMed Web of Science ®Google Scholar
• A. Alex, V. Silva, V. Vasconcelos, and A. Antunes, “Evidence of Unique and Generalist Microbes in Distantly Related Sympatric Intertidal Marine Sponges (Porifera: Demospongiae),” PloS One 8, no. 11 (2013): e80653.
   PubMed Web of Science ®Google Scholar
• Z. Bayat, M. Hassanshahian, and S. Cappello, “Immobilization of Microbes for Bioremediation of Crude Oil Polluted Environments: A Mini Review,” The Open Microbiology Journal 9 (2015): 48–54.
   PubMedGoogle Scholar
• Zeynab Bayat, Mehdi Hassanshahian, and Majid Askari Hesni, “Enrichment and Isolation of Crude Oil Degrading Bacteria from Some Mussels Collected from the Persian Gulf,” Marine Pollution Bulletin 101, no. 1 (2015): 85–91.
   PubMed Web of Science ®Google Scholar
• N. Ansari, F. Rokhbakhsh-Zamin, M. Hassanshahian, and M. Askari Hesni, “Biodegradation of Crude Oil Using Symbiont Crude-Oil Degrading Bacteria Isolated from Corals Collected at the Persian Gulf,” Journal of Chemical Technology & Biotechnology 96, no. 7 (2021): 1882–92.
   Web of Science ®Google Scholar
• M. Hassanshahian, G. Emtiazi, and S. Cappello, “Isolation and Characterization of Crude-Oil-Degrading Bacteria from the Persian Gulf and the Caspian Sea,” Marine Pollution Bulletin 64, no. 1 (2012): 7–12.
   PubMed Web of Science ®Google Scholar
• T. Kohno, Y. Sugimoto, K. Sei, and K. Mori, “Design of PCR Primers and Gene Probes for General Detection Alkane-Degrading Bacteria,” Microbes and Environments 17, no. 3 (2002): 114–212.****
   Google Scholar
• V. Pruthi and S. S. Cameotra, “Rapid Identification of Biosurfactant-Producing Bacterial Strains Using a Cell Surface Hydrophobicity Technique,” Biotechnology Techniques 11, no. 9 (1997): 671–4.
   Google Scholar
• M. Sathishkumar, A. Binupriya, S. H. Baik, and R. E. Yun, “Biodegradation of Crude Oil by Individual Bacterial Strains and a Mixed Bacterial Consortium Isolated from Hydrocarbon Contaminated Areas,” CLEAN – Soil, Air, Water 36, no. 1 (2008): 92–6.
   Web of Science ®Google Scholar
• K. Sei, Y. Sugimoto, K. Mori, H. Maki, and T. Kohno, “Monitoring of Alkane-Degrading Bacteria in a Sea-Water Microcosm During Crude Oil Degradation by Polymerase Chain Reaction based on Alkane-Catabolic Genes,” Environmental Microbiology 5, no. 6 (2003): 517–22.
   PubMed Web of Science ®Google Scholar
• Zeynab Bayat, Mehdi Hassanshahian, and Majid Askari Hesni, “Study the Symbiotic Crude Oil-Degrading Bacteria in the Mussel Mactra stultorum Collected from the Persian Gulf,” Marine Pollution Bulletin 105, no. 1 (2016): 120–4.
   PubMed Web of Science ®Google Scholar
• J. Van Beilen, Z. Li, W. A. Duetz, T. H. M. Smits, and B. Witholt, “Diversity of Alkane Hydroxylase Systems in the Environment,” Oil & Gas Science and Technology 58, no. 4 (2003): 427–40.
   Google Scholar
• A. A Bodour and R. M. Maier, “Biosurfactants: Types, Screening Methods and Application,” in Encyclopedia of Environmental Microbiology (New York: Wiley, 2002), 750.
   Google Scholar
• S. Heiss-Blanquet, Y. Benoit, C. Marechaux, and F. Monot, “Assessing the Role of Alkane Hydroxylase Genotypes in Environmental Samples by Competitive PCR,” Journal of Applied Microbiology 99, no. 6 (2005): 1392–403.
   PubMed Web of Science ®Google Scholar
• Noha H. Youssef, Kathleen E. Duncan, David P. Nagle, Kristen N. Savage, Roy M. Knapp, and Michael J. McInerney, “Comparison of Methods to Detect Biosurfactant Production by Diverse Microorganisms,” Journal of Microbiological Methods 56, no. 3 (2004): 339–46.
   PubMed Web of Science ®Google Scholar