References
- Abdallah, F. B., A. Ellafi, R. Lagha, H. Kallel, and A. Bakhrouf. 2011. Virulence gene expression, proteins secreted and morphological alterations of Vibrio parahaemolyticus and Vibrio alginolyticus in response to long-term starvation in seawater. African Journal of. Microbiology Research 5 (7):792–801.
- Abe, A., E. Ohashi, H. Ren, T. Hayashi, and H. Endo. 2007. Isolation and characterization of a cold-induced nonculturable suppression mutant of Vibrio vulnificus. Microbiology Research 162 (2):130–8. doi: https://doi.org/10.1016/j.micres.2006.01.007.
- Alonso, J. L., S. Mascellaro, Y. Moreno, M. A. Ferrús, and J. Hernández. 2002. Double-staining method for differentiation of morphological changes and membrane integrity of Campylobacter coli cells. Applied and Environmental Microbiology 68 (10):5151–154.
- Alipour, M., K. Issazadeh, and J. Soleimani. 2012. Isolation and identification of Vibrio parahaemolyticus from seawater and sediment samples I the Southern Coast of the Caspian Sea. Comparative Clinical Pathology 8 (23):129–33. doi: https://doi.org/10.1007/s00580-012-1583-6.
- Asakura, H., K. Kawamoto, Y. Haishima, S. Igimi, S. Yamamoto, and S. I. Makino. 2008. Differential expression of the outer membrane protein W (OmpW) stress response in enterohemorrhagic Escherichia coli O157:H7 corresponds to the viable but non-culturable state. Research Microbiology 159 (9–10):709–17. doi: https://doi.org/10.1016/j.resmic.2008.08.005.
- Asakura, H., A. Ishiwa, E. Arakawa, S. Makino, Y. Okada, S. Yamamoto, and S. Igimi. 2007. Gene expression of Vibrio cholerae in the cold stress-induced viable but nonculturable state. Environmental Microbiology 9 (4):869–79. doi: https://doi.org/10.1111/j.1462-2920.2006.01206.x.
- Asakura, H., N. Panutdaporn, K. Kawamoto, S. Igimi, S. Yamamoto, and S.-i. Makino. 2007. Proteomic characterization of enterohemorrhagic Escherichia coli O157:H7 in the oxidation-induced viable but non-culturable state. Microbiology and Immunology 51 (9):875–81. doi: https://doi.org/10.1111/j.1348-0421.2007.tb03969.x.
- Ayrapetyan, M., and J. D. Oliver. 2016. The viable but non-culturable state and its relevance in food safety. Current Opinion in Food Science 8:127–33. doi: https://doi.org/10.1016/j.cofs.2016.04.010.
- Ayrapetyan, M., T. C. Williams, and J. D. Oliver. 2014. Interspecific quorum sensing mediates the resuscitation of viable but nonculturable Vibrios. Applied and Environmental Microbiology 80 (8):2478–483. doi: https://doi.org/10.1128/AEM.00080-14.
- Baffone, W., B. Citterio, E. Vittoria, A. Casaroli, R. Campana, L. Falzano, and G. Donelli. 2003. Retention of virulence in viable but non-culturable halophilic Vibrio spp. International Journal of Food Microbiology 89 (1):31–9.
- Bates, T. C., and J. D. Oliver. 2004. The viable but nonculturable state of Kanagawa positive and negative strains of Vibrio parahaemolyticus. Journal of Microbiology 42 (2):74–9.
- Boaretti, M., M. D. M. Lleó, B. Bonato, C. Signoretto, and P. Canepari. 2003. Involvement of rpoS in the survival of Escherichia coli in the viable but non-culturable state. Environmental Microbiology 5 (10):986–96.
- Bouhdid, S., J. Abrini, M. Amensour, A. Zhiri, M. J. Espuny, and A. Manresa. 2010. Functional and ultrastructural changes in Pseudomonas aeruginosa and Staphylococcus aureus cells induced by Cinnamomum verum essential oil. Journal of Applied Microbiology 109 (4):1139–149. doi: https://doi.org/10.1111/j.1365-2672.2010.04740.x.
- Buck, A., and J. D. Oliver. 2010. Survival of spinach-associated Helicobacter pylori in the viable but nonculturable state. Food Control 21 (8):1150–154.
- Cabiscol, E., J. Tamarit, and J. Ros. 2000. Oxidative stress in bacteria and protein damage by reactive oxygen species. International Microbiology: The Official Journal of the Spanish Society for Microbiology 3 (1):3–8.
- Cabrera-García, M. E., C. Vázquez-Salinas, and E. I. Quiñones-Ramírez. 2004. Serologic and molecular characterization of Vibrio parahaemolyticus strains isolated from seawater and fish products of the Gulf Mexico. Applied and Environmental Microbiology 70 (11):6401–406. doi: https://doi.org/10.1128/AEM.70.11.6401-6406.2004.
- Capozzi, V., M. R. Di Toro, F. Grieco, V. Michelotti, M. Salma, A. Lamontanara, P. Russo, L. Orrú, H. Alexandre, and G. Spano. 2016. Viable but not culturable (VBNC) state of Brettanomyces bruxellensis in wine: new insights on molecular basis of VBNC behavior using a transcriptomic approach. Food Microbiology 59:196–204. doi: https://doi.org/10.1016/j.fm.2016.06.007.
- Caro, A., P. Got, J. Lesne, S. Binard, and B. Baleux. 1999. Viability and virulence of experimentally stressed nonculturable Salmonella Typhimurium. Applied and Environmental Microbiology 65 (7):3229–232.
- Centers for Disease Control and Prevention. 2013. Data from: Increase in Vibrio parahaemolyticus illness associated with consumption of shellfish from several Atlantic coast harvest areas, United States, 2013 [dataset]. Accessed July 23, 2018. https://www.cdc.gov/vibrio/investigations/vibriop-09-13/index.html.
- Chaisowwong, W., A. Kusumoto, M. Hashimoto, T. Harada, K. Maklon, and K. Kawamoto. 2012. Physiological characterization of Campylobacter jejuni under cold stresses conditions: its potential for public threat. Journal of Veterinary Science & Medicine 74 (1):43–50.
- Chaiyanan, S., S. C. Chaiyanan, C. Grim, T. Maugel, A. Huq, and R. R. Colwell. 2007. Ultrastructure of coccoid viable but nonculturable Vibrio cholerae. Environmental Microbiology 9 (2):393–402. doi: https://doi.org/10.1111/j.1462-2920.2006.01150.x.
- Charoenlap, N., W. Eiamphungporn, N. Chauvatcharin, S. Utamapongchai, P. Vattanaviboon, and S. Mongkolsuk. 2005. OxyR mediated compensatory expression between ahpC and katA and the significance of ahpC in protection from hydrogen peroxide in Xanthomonas campestris. FEMS Microbiology Letters 249 (1):73–8. doi: https://doi.org/10.1016/j.femsle06.002.
- Chen, S. H. 2012. The role of YeaZ in the VBNC state of Vibrio parahaemolyticus NCTC 10884. PhD diss. School of Molecular and Biomedical Science Faculty of Sciences, The University of Adelaide, Adelaide, South Australia, Australia.
- Chen, S. Y., W. N. Jane, Y. S. Chen, and H. C. Wong. 2009. Morphological changes of Vibrio parahaemolyticus under cold and starvation stresses. International Journal of Food Microbiology 129 (2):157–65. doi: https://doi.org/10.1016/j.ijfoodmicro.2008.11.009.
- Cheng, W., F. M. Juang, and J. C. Chen. 2004. The immune response of Taiwan abalone Haliotis diversicolor supertexta and its susceptibility to Vibrio parahaemolyticus at different salinity levels. Fish and Shellfish Immunology 16 (3):295–306. doi: https://doi.org/10.1016/S1050-4648(03)00111-6.
- Chiang, M. L., C. Wu, and M. J. Chen. 2014. Growth behaviors, thermostable direct hemolysin secretion and fatty acid profiles of acid-adapted and non-adapted Vibrio parahaemolyticus. International Journal of Nutrition and Food Sciences 8 (10):1099–103.
- Chiang, M. L., W. L. Ho, and C. C. Chou. 2008. Ethanol shock changes the fatty acid profile and survival behavior of Vibrio parahaemolyticus in various stress conditions. Food Microbiology 25 (2):359–65. doi: https://doi.org/10.1016/j.fm.2007.10.002.
- Chiang, M. L., R. C. Yu, and C. C. Chou. 2005. Fatty acid composition, cell morphology and responses to challenge by organic acid and sodium chloride of heat-shocked Vibrio parahaemolyticus. International Journal of Food Microbiology 104 (2):179–87. doi: https://doi.org/10.1016/j.ijfoodmicro.2005.02.007.
- Coutard, F., P. Crassous, M. Droguet, E. Gobin, R. R. Colwell, M. Pommepuy, and D. Hervio-Heath. 2007a. Recovery in culture of viable but nonculturable Vibrio parahaemolyticus: regrowth or resuscitation? The Isme Journal 1 (2):111–20. doi: https://doi.org/10.1038/ismej.2007.1.
- Coutard, F., S. Lozach, M. Pommepuy, and D. Hervio-Heath. 2007b. Real-time reverse transcription-PCR for transcriptional expression analysis of virulence and housekeeping genes in viable but nonculturable Vibrio parahaemolyticus after recovery of culturability. Applied and Environmental Microbiology 73 (16):5183–189. doi: https://doi.org/10.1128/AEM.02776-06.
- Coutard, F., M. Pommepuy, S. Loaec, and D. Hervio-Heath. 2005. mRNA detection by reverse transcription-PCR for monitoring viability and potential virulence in a pathogenic strain of Vibrio parahaemolyticus in viable but nonculturable state. Journal of Applied Microbiology 98 (4):951–61. doi: https://doi.org/10.1111/j.1365-2672.2005.02534.x.
- Currás, M., B. Magariños, A. E. Toranzo, and J. L. Romalde. 2002. Dormancy as a survival strategy of the fish pathogen Streptococcus parauberis in the marine environment. Diseases of Aquatic Organisms 52 (2):129–36. doi: https://doi.org/10.3354/dao052129.
- Day, A. P., and J. D. Oliver. 2004. Changes in membrane fatty acid composition during entry of Vibrio vulnificus into the viable but nonculturable state. Journal of Microbiology 42 (2):69–73.
- Dietersdorfer, E., A. Kirschner, B. Schrammel, A. Ohradanova-Repic, H. Stockinger, R. Sommer, J. Walochnik, and S. Cervero-Aragó. 2018. Starved viable but non-culturable (VBNC) Legionella strains can infect and replicate in amoebae and human macrophages. Water Research 15 (141):428–438. doi: https://doi.org/10.1016/j.watres.2018.01.058.
- Dinu, L. D., and S. Bach. 2013. Detection of viable but non-culturable Escherichia coli O157:H7 from vegetable samples using quantitative PCR with propidium monoazide and immunological assays. Food Control 31 (2):268–73. doi: https://doi.org/10.1016/j.foodcont.2012.10.020.
- Dinu, L. D., and S. Bach. 2011. Induction of viable but nonculturable Escherichia coli O157:H7 in the phyllosphere lettuce: a food safety risk factor. Applied and Environmental Microbiology 77 (23):8295–302. doi: https://doi.org/10.1128/AEM.05020-11.
- Dolezalova, E., and P. Lukes. 2015. Membrane damage and active but nonculturable state in liquid cultures of Escherichia coli treated with an atmospheric pressure plasma jet. Bioelectrochemistry 103:7–14. doi: https://doi.org/10.1016/j.bioelechem.2014.08.018.
- Fakruddin, M., K. S. B. Mannan, and S. Andrews. 2013. Viable but nonculturable bacteria: food safety and public health perspective. ISRN Microbiology 2013:703813. doi: https://doi.org/10.1155/2013/703813.
- Falcioni, T., S. Papa, R. Campana, A. Manti, M. Battistelli, and W. Baffone. 2008. State transitions of Vibrio parahaemolyticus VBNC cells evaluated by flow cytometry. Cytometry Part B: Clinical Cytometry 74 (5):272–81. doi: https://doi.org/10.1002/cyto.b.20427.
- Ferro, S., T. Amorico, and P. Deo. 2018. Role of food sanitizing treatments in inducing the ‘viable but nonculturable’ state of microorganisms. Food Control 91:321–9. doi: https://doi.org/10.1016/j.foodcont.2018.04.016.
- Gentry, D. R., and M. Cashel. 1996. Mutational analysis of the Escherichia coli spot gene identifies distinct but overlapping regions involved in ppGpp synthesis and degradation. Molecular Microbiology 19 (6):1373–384.
- Giagnoni, L., M. Arenella, E. Galardi, P. Nannipieri, and G. Renella. 2018. Bacterial culturability and the viable but noncuturable (VBNC) state studied by a proteomic approach using an artificial soil. Soil Biology & Biochemistry 118:51–8. doi: https://doi.org/10.1016/j.soilbio.2017.12.004.
- Gupte, A. R., C. L. E. de Rezende, and S. W. Joseph. 2003. Induction and resuscitation of viable but nonculturable Salmonella enterica serovar Typhimurium DT104. Applied and Environmental Microbiology 69 (11):6669–675.
- Hara-Kudo, Y., Sugiyama, K. M. Nishibuchi, A. Chowdhury, J. Yatsuyanagi, Y. Ohtomo, A. Saito, H. Nagano, T. Nishina, H. Nakagawa, H., et al. 2003. Prevalence of pandemic thermostable direct hemolysin-producing Vibrio parahaemolyticus O3:K6 in seafood and the coastal environment in Japan. Applied and Environmental Microbiology 69 (7):3883–891.
- Heim, S., M. D. M. Lleo, B. Bonato, C. A. Guzman, and P. Canepari. 2002. The viable but nonculturable state and starvation are different stress responses of Enterococcus faecalis. as determined by proteome analysis. Journal of. Bacteriology 184 (23):6739–745.
- Highmore, C. J., J. C. Warner, S. D. Rothwell, S. A. Wilks, and C. W. Keevil. 2018. Viable-but-nonculturable Listeria monocytogenes and Salmonella enterica serovar Thompson induced by chlorine stress remain infectious. MBio 9 (2):e00540–18. doi: https://doi.org/10.1128/mBio.00540-18.
- Hu, Z., and J. Lutkenhaus. 1999. Topological regulation of cell division in Escherichia coli involves rapid pole to pole oscillation of the division inhibitor MinC under the control of MinD and MinE. Molecular Microbiology 34 (1):82–90.
- Huss, H. H., A. Reilly, and P. K. B. Embarek. 2000. Prevention and control of hazards in seafood. Food Control 11 (2):149–56. doi: https://doi.org/10.1016/S0956-7135(99)00087-0.
- Hung, W. C., W. N. Jane, and H. C. Wong. 2013. Association of a D-alanyl-D-alanine carboxypeptidase gene with the formation of aberrantly shaped cells during the induction of viable but nonculturable Vibrio parahaemolyticus. Applied and Environmental Microbiology 79 (23):7305–312. doi: https://doi.org/10.1128/AEM.01723-13.
- Huo, X., and R. E. Viola. 1996. Functional group characterization of homoserine kinase from Escherichia coli. Archives of Biochemistry and Biophysics 330 (2):373–9. doi: https://doi.org/10.1006/abbi.1996.0264.
- Jallouli, W., N. Zouari, and S. Jaoua. 2010. Involvement of oxidative stress and growth at high cell density in the viable but nonculturable state of Photorhabdus temperata spp. temperata strain K122. Process Biochemistry 45 (5):706–13. doi: https://doi.org/10.1016/j.procbio.2010.01.007.
- Jang, K. I., M. G. Kim, S. D. Ha, K. S. Kim, K. H. Lee, D. H. Chung, C. H. Kim, and K. Y. Kim. 2007. Morphology and adhesion of Campylobacter jejuni to chicken skin under varying conditions. Journal of Microbiology and Biotechnology 17 (2):202–6.
- Jia, J., Y. Chen, Y. Jiang, J. Tang, L. Yang, C. Liang, Z. Jia, and L. Zhao. 2014. Visualized analysis of cellular fatty acid profiles of Vibrio parahaemolyticus strains under cold stress. FEMS Microbiology Letters 357 (1):92–8. doi: https://doi.org/10.1111/1574-6968.12498.
- Jiang, X. P., and T. J. Chai. 1996. Survival of Vibrio parahaemolyticus at low temperatures under starvation conditions and subsequent resuscitation of viable, nonculturable cells. Applied and Environmental Microbiology 62 (4):1300–305.
- Kaprelyants, A. S., and D. B. Kell. 1992. Rapid assessment of bacterial viability and vitality by rhodamine 123 and flow cytometry. Journal of Applied Bacteriology 72 (5):410–22. doi: https://doi.org/10.1111/j.1365-2672.1992.tb01854.x.
- Klančnik, A., B. Guzej, P. Jamnik, D. Vuckovič, M. Abram, and S. S. Mozina. 2009. Stress response and pathogenic potential of Campylobacter jejuni cells exposed to starvation. Research in Microbiology 160 (5):345–52. doi: https://doi.org/10.1016/j.resmic.2009.05.002.
- Kim, J. S., N. Chowdhury, R. Yamasaki, and T. K. Wood. 2018. Viable but non-culturable and persistence describe the same bacterial stress state. Environmental Microbiology 20 (6):2038–2048. doi: https://doi.org/10.1111/1462-2920.14075
- Kong, I.-S., T. C. Bates, A. Hülsmann, H. Hassan, B. E. Smith, and J. D. Oliver. 2004. Role of catalase and oxyR in the viable but nonculturable state of Vibrio vulnificus. FEMS Microbiology Ecology 50 (3):133–42. doi: https://doi.org/10.1016/j.femsec.2004.06.004.
- Kruse, T., J. Møller-Jensen, A. Løbner-Olesen, and K. Gerdes. 2003. Dysfunctional MreB inhibits chromosome segregation in Escherichia coli. Embo Journal 22 (19):5283–292. doi: https://doi.org/10.1093/emboj/cdg504.
- Kusumoto, A., H. Asakura, and K. Kawamoto. 2012. General stress sigma factor RpoS influences time required to enter into the viable but nonculturable state in Salmonella enterica. Microbiology and Immunology 56 (4):228–37. doi: https://doi.org/10.1111/j.1348-0421.2012.00428.x.
- Lai, C. J., S. Y. Chen, I. H. Lin, C. H. Chang, and H. C. Wong. 2009. Change of protein profiles in the induction of the viable but nonculturable state of Vibrio parahaemolyticus. International Journal of Food Microbiology 135 (2):118–24. doi: https://doi.org/10.1016/j.ijfoodmicro.2009.08.023.
- Lai, W. B., and H. C. Wong. 2013. Influence of combinations of sublethal stresses on the control of Vibrio parahaemolyticus and its cellular oxidative response. Food Control 33 (1):186–92. doi: https://doi.org/10.1016/j.foodcont.2013.02.036.
- Liao, H., L. Jiang, and R. Zhang. 2017. Induction of a viable but nonculturable state of Salmonella Typhimurium by thermosonication and factors affecting resuscitation. FEMS Microbiology Letter 365 (2):fnx249.
- Liao, C., Z. Y. Peng, J. B. Li, X. W. Cui, Z. H. Zhang, P. K. Malakar, W. J. Zhang, Y. J. Pan, and Y. Zhao. 2015. Simultaneous construction of PCR-DGGE-based predictive models of Listeria monocytogenes and Vibrio parahaemolyticus on cooked shrimps. Letters in Applied Microbiology 60 (3):210–6. doi: https://doi.org/10.1111/lam.12376.
- Liao, H., R. Zhang, K. Zhong, Y. Ma, X. Nie, and Y. Liu. 2018. Induction of a viable but non-culturable state in salmonella typhimurium is correlated with free radicals generated by thermosonication. International Journal of Food Microbiology 286:90–7.
- Lin, H., C. Ye, S. Chen, S. Zhang, and X. Yu. 2017. Viable but nonculturable E. coli induced by low level chlorination have higher persistence to antibiotics than their counterparts. Environmental Pollution 230:242–9. doi: https://doi.org/10.1016/j.envpol.2017.06.047.
- Lin, X. M., L. N. Wu, H. Li, S. Y. Wang, and X. X. Peng. 2008. Downregulation of Tsx and OmpW and upregulation of OmpX are required for iron homeostasis in Escherichia coli. Journal of Proteome Research 7 (3):1235–243. doi: https://doi.org/10.1021/pr7005928.
- Linder, K., and J. D. Oliver. 1989. Membrane fatty acid and virulence changes in the viable but nonculturable state of Vibrio vulnificus. Applied and Environmental Microbiology 55 (11):2837–842.
- Magnuson, K., S. Jackowski, C. O. Rock, and J. E. Cronan. Jr.1993. Regulation of fatty acid biosynthesis in Escherichia coli. Microbiological Reviews 57 (3):522–42.
- Masmoudi, S., M. Denis, and S. Maalej. 2010. Inactivation of the gene KatA or sodA affects the transient entry into the viable but non-culturable response of Staphylococcus aureus in natural seawater at low temperature. Marine Pollution Bulletin 60 (12):2,209–214. doi: https://doi.org/10.1016/j.marpolbul.2010.08.017.
- McDougald, D., L. Gong, S. Srinivasan, E. Hild, L. Thompson, K. Takayama, S. A. Rice, and S. Kjelleberg. 2002. Defences against oxidative stress during starvation in bacteria. Antonie Van Leeuwenhoek 81 (1/4):3–13. doi: https://doi.org/10.1023/A:1020540503200.
- Meng, L., T. Alter, T. Aho, and S. Huehn. 2015. Gene expression profiles of Vibrio parahaemolyticus in viable but non-culturable state. FEMS Microbiology Ecology 91 (5):fiv035. doi: https://doi.org/10.1093/femsec/fiv035.
- Miles, D. W., T. Ross, J. Olley, and T. A. McMeekin. 1997. Development and evaluation of a predictive model for the effect of temperature and water activity on the growth rate of Vibrio parahaemolyticus. International Journal of Food Microbiology 38 (2–3):133–42.
- Millet, V., and A. Lonvaud-Funel. 2000. The viable but non-culturable state of wine micro-organisms during storage. Letters in Applied Microbiology 30 (2):136–41.
- Ministry of Food Drug and Safety in Republic of Korea. 2018. Data from: Occurrence of the food-borne disease outbreaks in 2017 [dataset]. Accessed July 23, 2018. http://www.foodsafetykorea.go.kr/portal/healthyfoodlife/foodPoisoningStat.do?menu_no=519&menu_grp=MENU_GRP02.
- Mizunoe, Y., S. N. Wai, T. Ishikawa, A. Takade, and S. Yoshida. 2000. Resuscitation of viable but nonculturable cells of Vibrio parahaemolyticus induced at low temperature under starvation. FEMS Microbiology Letters 186 (1):115–20. doi: https://doi.org/10.1111/j.1574-6968.2000.tb09091.x.
- Mizunoe, Y., S. N. Wai, A. Takade, and S.-i. Yoshida. 1999. Restoration of culturability of starvation-stressed and low-temperature-stressed Escherichia coli O157 cells by using H2O2-degrading compounds. Archives of Microbiology 172 (1):63–7. doi: https://doi.org/10.1007/s002030050741.
- Morishige, Y., K. Fujimori, and F. Amano. 2013. Differential resuscitative effect of pyruvate and its analogues on VBNC (Viable but non-culturable) Salmonella. Microbes and Environments 28 (2):180–6. doi: https://doi.org/10.1264/jsme2.ME12174.
- Muela, A., C. Seco, E. Camafeita, I. Arana, M. Orruño, J. A. López, and I. Barcina. 2008. Changes in Escherichia coli outer membrane subproteome under environmental conditions inducing the viable but nonculturable state. FEMS Microbiology Ecology 64 (1):28–36. doi: https://doi.org/10.1111/j.1574-6941.2008.00453.x.
- Munna, M. S., I. Nur, T. Rahman, and R. Noor. 2013. Influence of exogenous oxidative stress on Escherichia coli growth, viability, and morphology. American Journal of BioScience 1 (4):59–62. doi: https://doi.org/10.11648/j.ajbio.20130104.12.
- Nair, G. B., T. Ramamurthy, S. K. Bhattacharya, B. Dutta, Y. Takeda, and D. A. Sack. 2007. Global dissemination of Vibrio parahaemolyticus serotype O3:K6 and its serovariants. Clinical Microbiology Reviews 20 (1):39–48. doi: https://doi.org/10.1128/CMR.00025-06.
- Nakashima, T., T. Seki, A. Matsumoto, H. Miura, E. Sato, Y. Niwano, M. Kohno, S. Ōmura, and Y. Takahashi. 2010. Generation of reactive oxygen species from conventional laboratory media. Journal of Bioscience and Bioengineering 110 (3):304–7. doi: https://doi.org/10.1016/j.jbiosc.2010.03.003.
- National Institute of Food and Drug Safety Evaluation. 2018. Data from: Detection of pathogenic bacteria [dataset]. Accessed July 23, 2018. http://www.nifds.go.kr/brd/m_18/view.do?seq=10103&srchFr=&srchTo=&srchWord=&srchTp=&itm_seq_1=0&itm_seq_2=0&multi_itm_seq=0&company_cd=&company_nm=&page=5.
- Nicolò, M. S., and S. P. P. Guglielmino. 2012. Viable but nonculturable bacteria in food. Public health—Methodology, environmental and systems issues, ed. Rijeka, 190–216.
- Croatia: InTech. Accessed January 20, 2019. http://www.intechopen.com/books/public-health-methodologyenvironmental-and-systems-issues/viable-but-not-culturable-bacteria-in-food.
- Noor, R., M. Murata, and M. Yamada. 2009. Oxidation stress as trigger for growth phase-specific sigma E-dependent cell lysis in Escherichia coli. Journal of Molecular Microbiology and Biotechnology 17 (4):177–87. doi: https://doi.org/10.1159/000236029.
- Nowakowska, J., and J. D. Oliver. 2013. Resistance to environmental stresses by cells of Vibrio vulnificus in the VBNC state. FEMS Microbiology Ecology 84 (1):213–22. doi: https://doi.org/10.1111/1574-6941.12052.
- Oh, E. N., L. McMullen, and B. H. Jeon. 2015. Impact of oxidative stress defense on bacterial survival and morphological change in Campylobacter jejuni under aerobic conditions. Front Microbiology 6. article 295. doi: https://doi.org/10.3389/fmicb.2015.00295.
- Oliver, J. D. 2010. Recent findings on the viable but nonculturable state in pathogenic bacteria. FEMS Microbiology Reviews 34 (4):415–25. doi: https://doi.org/10.1111/j.1574-6976.2009.00200.x.
- Oliver, J. D., and R. Bockian. 1995. In vivo resuscitation, and virulence towards mice, of viable but nonculturable cells of Vibrio vulnificus. Applied Environmental Microbiology 61 (7):2620–623.
- Ostermeier, C., S. Iwata, and H. Michel. 1996. Cytochrome c oxidase. Current Opinion in Structural Biology 6 (4):460–6.
- Panutdaporn, N., K. Kawamoto, H. Asakura, and S. I. Makino. 2006. Resuscitation of the viable but nonculturable state of Salmonella enterica serovar Oranienburg by recombinant resuscitation-promoting factor derived from Salmonella Typhimurium strain LT2. International Journal of Food Microbiology 106 (3):241–7. doi: https://doi.org/10.1016/j.ijfoodmicro.2005.06.022.
- Pasquaroli, S., G. Zandri, C. Vignaroli, C. Vuotto, G. Donelli, and F. Biavasco. 2013. Antibiotic pressure can induce the viable but nonculturable state in Staphylococcus aureus growing biofilms. Journal of Antimicrobial Chemotherapy 68 (8):1812–817. doi: https://doi.org/10.1093/jac/dkt086.
- Pienaar, J. A., A. Singh, and T. G. Barnard. 2016. The viable but non-culturable state in pathogenic Escherichia coli: a general review. African Journal of Laboratory Medicine 5 (1):368. doi: https://doi.org/10.4102/ajlm.v5i1.368.
- Pinenaar, J. A., A. Singh, and T. G. Barnard. 2016. The viable but nonculturable state in pathogenic Escherichia coli: a general review. African Journal of Laboratory Medicine 5 (1):1–9. doi: https://doi.org/10.4102/ajlm.v5i1.368.
- Pinto, D., V. Almedia, M. Almedia Santos, and L. Chambel. 2011. Resuscitation of Escherichia coli VBNC cells depends on a variety of environmental or chemical stimuli. Journal of Applied Microbiology 110 (6):1601–611. doi: https://doi.org/10.1111/j.1365-2672.2011.05016.x.
- Postnikova, O. A., J. Shao, N. M. Mock, C. J. Baker, and L. G. Nemchinov. 2015. Gene expression profiling in viable but nonculturable (VBNC) cells of Pseudomonas syringae pv. syringae. Front. Microbiol 6:1419. doi: https://doi.org/10.3389/fmicb.2015.01419.
- Rahman, I., M. Shahamat, M. A. R. Chowdhury, and R. R. Colwell. 1996. Potential virulence of viable but nonculturable Shigella dysenteriae Type 1. Applied and Environmental Microbiology 62 (1):115–20.
- Rahman, I., M. Shahamat, P. A. Kirchman, E. Russek-Cohen, and R. R. Colwell. 1994. Methionine uptake and cytopathogenicity of viable but nonculturable Shigella dysenteriae Type 1. Applied and Environmental Microbiology 60 (10):3573–578.
- Ramamurthy, T., A. Ghosh, G. P. Pazhani, and S. Shinoda. 2014. Current perspectives on viable but non-culturable (VBNC) pathogenic bacteria. Frontiers in Public Health 2 (103):103. doi: https://doi.org/10.3389/fpubh.2014.00103.
- Raskin, D. M., and A. J. de Boer. 1997. The MinE ring: an FtsZ-independent cell structure required for selection of the correct division site in E. coli. Cell 91 (5):685–94.
- Rodrigues, R. C., E. Martins, M. C. D. Vanetti, U. M. Pinto, and M. T. dos Santos. 2015. Induction of the viable but nonculturable state of Salmonella enterica serovar enteritidis deficient in (p)ppGpp synthesis. Annals of Microbiology 65:2171–178. doi: https://doi.org/10.1007/s13213-015-1057-6.
- Salma, M., S. Rousseaux, A. S. L. Grand, B. Divol, and H. Alexandre. 2013. Characterization of the viable but nonculturable (VBNC) state in Saccharomyces cerevisiae. PLoS One 8 (10):e77600. doi: https://doi.org/10.1371/journal.pone.0077600.
- Santander, R. D., A. Figas, and E. G. Biosca. 2018. Erwinia amylovora catalases KatA and KatG are virulence factors and delay the starvation-induced viable but nonculturable (VBNC) response. Molecular Plant Pathology 19 (4):922–34. doi: https://doi.org/10.1111/mpp.12577.
- Serpaggi, V., F. Remize, G. Recorbet, E. Gaudot-Dumas, A. Sequeira-Le Grand, and H. Alexandre. 2012. Characterization of the “viable but nonculturable (VBNC) state in the wine spoilage yeast Brettanomyces. Food Microbiology 30 (2):438–47. doi: https://doi.org/10.1016/j.fm.2011.12.020.
- Shafer, W. M., W. L. Veal, E. H. Lee, L. Zarantonelli, J. T. Balthazar, and C. Rouquette. 2001. Genetic organization and regulation of antimicrobial efflux systems possessed by Neisseria gonorrhoeae and Neisseria meningitidis. Journal of Molecular Microbiology and Biotechnology 3 (2):219–24.
- Signoretto, C., G. Burlacchini, M. del Mar Lleò, C. Pruzzo, M. Zampini, L. Pane, G. Franzini, and P. Canepari. 2004. Adhesion of Enterococcus faecalis in the nonculturable state to plankton is the main mechanism responsible for persistence of this bacterium in both lake and seawater. Applied and Environmental Microbiology 70 (11):6892–896. doi: https://doi.org/10.1128/AEM.70.11.6892-6896.2004.
- Stirling, D. A., C. S. Hulton, L. Waddell, S. F. Park, G. S. Stewart, I. R. Booth, and C. F. Higgins. 1989. Molecular characterization of the proU loci of Salmonella Typhimurium and Escherichia coli encoding osmoregulated glycine betaine transport systems. Molecular Microbiology 3 (8):1025–038.
- Su, X., L. Guo, L. Ding, K. Qu, and C. Shen. 2016. Induction of viable but nonculturable state in Rhodococcus and transcriptome analysis using RNA-seq. PLoS One 11 (1):e0147593. doi: https://doi.org/10.1371/journal.pone.0147593.
- Sun, X., T. Liu, X. Peng, and L. Chen. 2014. Insights into Vibrio parahaemolyticus CHN25 response to artificial gastric fluid stress by transcriptomic analysis. International Journal of Molecular Sciences 15 (12):22539–562. doi: https://doi.org/10.3390/ijms151222539.
- Tang, J., J. Jia, Y. Chen, X. Huang, X. Zhang, L. Zhao, W. Hu, C. Wang, C. Lin, and Z. Wu. 2018. Proteomic analysis of Vibrio parahaemolyticus under cold stress. Current Microbiology 75 (1):20–6. doi: https://doi.org/10.1007/s00284-017-1345-4.
- Tholozan, J. L., J. M. Cappelier, J. P. Tissier, G. Delattre, and M. Federighi. 1999. Physiological characterization of viable-but-nonculturable Campylobacter jejuni cells. Applied Environmental Microbiology 65 (3):1110–116.
- Trevors, J. T., J. D. van Elsas, and A. K. Bej. 2013. The molecularly crowded cytoplasm of bacterial cells: dividing cells contrasted with viable but non-culturable (VBNC) bacterial cells. Current Issues in Molecular Biology 15:1–6.
- Trinh, N. T. T., E. Dumas, M. Le Thanh, P. Degraeve, C. B. Amara, A. Gharsallaoui, and N. Oulahal. 2015. Effect of a Vietnamese Cinnamomum cassia essential oil and its major component trans-cinnamaldehyde on the cell viability, membrane integrity, membrane fluidity, and proton motive force of Listeria innocua. Canadian Journal of Microbiology 61 (4):263–71. doi: https://doi.org/10.1139/cjm-2014-0481.
- Tunung, R., S. Margaret, P. Jeyaletchumi, L. C. Chai, T. C. Tuan Zainazor, F. M. Ghazali, Y. Nakaguchi, M. Nishibuchi, and R. Son. 2010. Prevalence and quantification of Vibrio parahaemolyticus in raw salad vegetables at retail level. Journal of Microbiology and Biotechnology 20 (2):391–6.
- U. S. Food and Drug Administration. 2004. Bacteriological analytical manual, Chapter 9, Vibrio. Accessed July 23, 2018. https://www.fda.gov/food/foodscienceresearch/laboratorymethods/ucm070830.htm.
- van Kessel, J. C., S. T. Rutherford, J. P. Cong, S. Quinodoz, J. Healy, and B. L. Bassler. 2015. Quorum sensing regulates the osmotic stress response in Vibrio harveyi. Journal of Bacteriology 197 (1):73–80. doi: https://doi.org/10.1128/JB.02246-14.
- Vashishtha, A., and P. K. Dhawal. 2015. Microbial osmoadaptation-a road towards sustainability in extreme conditions. In Microbes: in action, ed. J. Singh, and P. Gehlot, 95–108. 1st ed. India: Agrobios.
- Vattakaven, T., P. Bond, G. Bradley, and C. B. Munn. 2006. Differential effects of temperature and starvation on induction of the viable-but-nonculturable state in the coral pathogens Vibrio shiloi and Vibrio tasmaniensis. Applied and Environmental Microbiology 72 (10):6508–513. doi: https://doi.org/10.1128/AEM.00798-06.
- Wachi, M., and M. Matsuhashi. 1989. Negative control of cell division by mreB, a gene that functions in determining the rod shape of Escherichia coli cells. Journal of Bacteriology 171 (6):3123–127.
- Wai, S. N., T. Moriya, K. Kondo, H. Misumi, and K. Amako. 1996. Resuscitation of Vibrio cholerae O1 strain TSI-4 from a viable but nonculturable state by heat shock. FEMS Microbiology Letters 136 (2):187–91.
- Wang, H. W., C. H. Chung, T. Y. Ma, and H. C. Wong. 2013. Roles of alkyl hydroperoxide reductase subunit C (AhpC) in viable but nonculturable Vibrio parahaemolyticus. Applied and Environmental Microbiology 79 (12):3734–743. doi: https://doi.org/10.1128/AEM.00560-13.
- Whitaker, W. B., G. P. Richards, and E. F. Boyd. 2014. Loss of sigma factor RpoN increases intestinal colonization of Vibrio parahaemolyticus in an adult mouse model. Infection and Immunity 82 (2):544–56. doi: https://doi.org/10.1128/IAI.01210-13.
- Wong, H. C., C. T. Shen, C. N. Chang, Y. S. Lee, and J. D. Oliver. 2004a. Biochemical and virulence characterization of viable but nonculturable cells of Vibrio parahaemolyticus. Journal of Food Protection 67 (11):2430–435.
- Wong, H. C., and P. Wang. 2004. Induction of viable but nonculturable state in Vibrio parahaemolyticus and its susceptibility to environmental stresses. Journal of Applied Microbiology 96 (2):359–66. doi: https://doi.org/10.1046/j.1365-2672.2004.02166.x.
- Wong, H. C., P. Wang, S. Y. Chen, and S. W. Chiu. 2004b. Resuscitation of viable but non-culturable Vibrio parahaemolyticus in a minimum salt medium. FEMS Microbiology Letters 233 (2):269–75. doi: https://doi.org/10.1016/j.femsle.2004.02.015.
- Xu, X., Q. Wu, J. Zhang, J. Cheng, S. Zhang, and K. Wu. 2014. Prevalence, pathogenicity, and serotypes of Vibrio parahaemolyticus in shrimp from Chinese retail markets. Food Control 46:81–5. doi: https://doi.org/10.1016/j.foodcont.2014.04.042.
- Xu, J., K. Suita, K. Okuno, A. Takaya, T. Yamamoto, and E. Isogai. 2018. Membrane vesicle protein PagC as a novel biomarker for detecting pathogenic Salmonella in the viable but nonculturable state. Journal of Veterinary Medical Science 80 (1):133–7. doi: https://doi.org/10.1292/jvms.17-0164.
- Xu, C. X., S. Y. Wang, H. X. Ren, X. M. Lin, L. Wu, and X. X. Peng. 2005. Proteomic analysis on the expression of outer membrane proteins of Vibrio alginolyticus at different sodium concentrations. Proteomics 5 (12):3145–152. doi: https://doi.org/10.1002/pmic.200401128.
- Yoon, J. H., Y. M. Bae, and S. Y. Lee. 2017. Effects of varying concentrations of sodium chloride and acidic conditions on the behavior of Vibrio parahaemolyticus and Vibrio vulnificus cold-starved in artificial sea water microcosms. Food Science and Biotechnology 26 (3):829–39. doi: https://doi.org/10.1007/s10068-017-0105-3.
- Yu, W. T., K. J. Jong, Y. R. Lin, S. E. Tsai, Y. H. Tey, and H. C. Wong. 2013. Prevalence of Vibrio parahaemolyticus in oyster and clam culturing environments in Taiwan. International Journal of Food Microbiology 160 (3):185–92. doi: https://doi.org/10.1016/j.ijfoodmicro.2012.11.002.
- Yue, X., B. Liu, J. Xiang, and J. Jia. 2010. Identification and characterization of the pathogenic effect of a Vibrio parahaemolyticus-related bacterium isolated form clam Meretrix meretrix with mass mortality. Journal of Invertebrate Pathology 103 (2):109–15. doi: https://doi.org/10.1016/j.jip.2009.11.008.
- Zhang, D., Q. Dong, and T. Ross. 2017. Inactivation kinetics of Vibrio parahaemolyticus on sand shrimp (Metapenaeus ensis) by cinnamaldehyde at 4 °C. Journal of Food Quality 2017 (2):5767925. doi: https://doi.org/10.1155/2017/5767925.
- Zhang, S., C. Ye, H. Lin, L. Lv, and X. Yu. 2015. UV disinfection induces a VBNC state in Escherichia coli and Pseudomonas aeruginosa. Environmental Science & Technology 49 (3):1721–728. doi: https://doi.org/10.1021/es505211e.
- Zhao, F., X. Bi, Y. Hao, and X. Liao. 2013. Induction of viable but nonculturable E. coli O157:H7 by high pressure CO2 and its characteristics. PLoS ONE 8 (4):62388–392. doi: https://doi.org/10.1371/journal.pone.0062388.
- Zhao, F., Y. Wang, H. An, Y. Hao, X. Hu, and X. Liao. 2016. New insights into the formation of viable but nonculturable Escherichia coli O157:H7 induced by high-pressure CO2. American Society for Microbiology 7 (4):e00961–16. doi: https://doi.org/10.1128/mBio.00961-16.
- Zhong, Q., J. Tian, J. Wang, X. Fang, and Z. Liao. 2018. iTRAQ-based proteomic analysis of the viable but nonculturable state of Vibrio parahaemolyticus ATCC 17802 induced by food preservative and low temperature. Food Control 85:369–75. doi: https://doi.org/10.1016/j.foodcont.2017.10.011.