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Review Article

Identifying the panorama of potential pandemic pathogens and their key characteristics: a systematic scoping review

, , , &
Received 24 Nov 2023, Accepted 22 May 2024, Published online: 20 Jun 2024

References

  • Aden D, Zaheer S, Kumar R, Ranga S. Apr. 2023. Monkeypox (Mpox) outbreak during COVID-19 pandemic-Past and the future. J Med Virol. 95(4):e28701. doi: 10.1002/jmv.28701.
  • Adesola RO, D’Souza JN, Bello AB, Mukwekwe VJ. 2023. Is monkeypox going to be the next pandemic? Bull Natl Res Cent. 47(1):19. doi: 10.1186/s42269-023-00995-1.
  • Akram F, Imtiaz M, Haq IU. 2023. Emergent crisis of antibiotic resistance: a silent pandemic threat to 21(st) century. Microb Pathog. 174:105923. doi: 10.1016/j.micpath.2022.105923.
  • Alchetron.com. 2023. Coxsackievirus – Alchetron, The Free Social Encyclopedia. Alchetron.com. [accessed 2023 Oct 28]. https://alchetron.com/Coxsackievirus.
  • Armstrong PA, Rivera SM, Escandon P, Caceres DH, Chow N, Stuckey MJ, Díaz J, Gomez A, Vélez N, Espinosa-Bode A, et al. 2019. Hospital-associated multicenter outbreak of emerging Fungus Candida auris, Colombia, 2016. Emerg Infect Dis. 25(7):1339–1346. doi: 10.3201/eid2507.180491.
  • Balakumar M, Vontela HR, Shinde VV, Kulshrestha V, Mishra B, Aduri R. 2022. Dengue outbreak and severity prediction: current methods and the future scope. Virusdisease. 33(2):125–131. doi: 10.1007/s13337-022-00767-x.
  • Balasubramanian D, López-Pérez M, Almagro-Moreno S. 2023. Cholera dynamics and the emergence of pandemic vibrio cholerae. Adv Exp Med Biol. 1404:127–147. doi: 10.1007/978-3-031-22997-8_7.
  • Banerjee I, Robinson J, Banerjee I, Sathian B. 2021. Omicron: the pandemic propagator and lockdown instigator – what can be learnt from South Africa and such discoveries in future. Nepal J Epidemiol. 11(4):1126–1129. doi: 10.3126/nje.v11i4.41569.
  • Bardhan M, Ray I, Roy S, Bhatt P, Patel S, Asri S, Shariff S, Shree A, Mitra S, Roy P, et al. 2023. Emerging zoonotic diseases and COVID-19 pandemic: global Perspective and Indian Scenario. Ann Med Surg. 85(8):3997–4004. doi: 10.1097/MS9.0000000000001057.
  • Barr R, Green CA, Sande CJ, Drysdale SB. 2019. Respiratory syncytial virus: diagnosis, prevention and management. Ther Adv Infect Dis. 6:2049936119865798. doi: 10.1177/2049936119865798.
  • Berkelman R. 2015. Legionellosis. In Control of Communicable Diseases Manual, in Control of Communicable Diseases Manual. American Public Health Association. doi: 10.2105/CCDM.2745.087.
  • Bradley BT, Bryan A. 2019. Emerging respiratory infections: the infectious disease pathology of SARS, MERS, pandemic influenza, and Legionella. Semin Diagn Pathol. 36(3):152–159. doi: 10.1053/j.semdp.2019.04.006.
  • Britannica. 2023. Pandemic | description, history, preparedness, & facts | Britannica. [accessed 2023 Aug 26]. https://www.britannica.com/science/pandemic.
  • Caicedo E-Y, Charniga K, Rueda A, Dorigatti I, Mendez Y, Hamlet A, Carrera J-P, Cucunubá ZM. 2021. The epidemiology of Mayaro virus in the Americas: a systematic review and key parameter estimates for outbreak modelling. PLoS Negl Trop Dis. 15(6):e0009418. doi: 10.1371/journal.pntd.0009418.
  • Campylobacter. 2023. Campylobacter (Campylobacteriosis) | Campylobacter | CDC. [accessed 2023 Sep 20]. https://www.cdc.gov/campylobacter/index.html.
  • Candida auris. 2023. About Candida auris (C. auris) | Candida auris | Fungal Diseases | CDC. [accessed 2023 Sep 15]. https://www.cdc.gov/fungal/candida-auris/candida-auris-qanda.html.
  • Cardoso CW, Kikuti M, Prates APPB, Paploski IAD, Tauro LB, Silva MMO, Santana P, Rego MFS, Reis MG, Kitron U, et al. 2017. Unrecognized emergence of Chikungunya Virus during a Zika Virus Outbreak in Salvador, Brazil. PLoS Negl Trop Dis. 11(1):e0005334. doi: 10.1371/journal.pntd.0005334.
  • CDC. 2023. Cases, data, and surveillance. Centers for disease control and prevention. [accessed 2023 Nov 07]. https://www.cdc.gov/coronavirus/2019-ncov/cases-updates/index.html.
  • CDC-Hantavirus. 2023. CDC – Hantavirus. [accessed 2023 Sep 15]. https://www.cdc.gov/hantavirus/index.html.
  • Chamchod F, Palittapongarnpim P. 2019. Modeling clostridium difficile in a hospital setting: control and admissions of colonized and symptomatic patients. Theor Biol Med Model. 16(1):2. doi: 10.1186/s12976-019-0098-0.
  • Chikungunya Fact Sheet. 2023. Chikungunya fact sheet. [accessed 2023 Sep 14]. https://www.who.int/news-room/fact-sheets/detail/chikungunya.
  • Clinical Infectious Diseases. 2023. Control of Communicable Diseases Manual, 19th Edition Edited by David L. Heymann Washington, DC: American Public Health Association, 2008. 746 pp. $45.00 (hardcover) | Clinical Infectious Diseases | Oxford Academic. [accessed 2023 Oct 28]. https://academic.oup.com/cid/article/49/8/1292/430023.
  • Delamater PL, Street EJ, Leslie TF, Yang YT, Jacobsen KH. 2019. Complexity of the Basic Reproduction Number (R0) – Volume 25, Number 1 – January 2019 – Emerging Infectious Diseases journal – CDC. doi: 10.3201/eid2501.171901.
  • Di Pilato V, Codda G, Ball L, Giacobbe DR, Willison E, Mikulska M, Magnasco L, Crea F, Vena A, Pelosi P, et al. 2021. Molecular epidemiological investigation of a nosocomial cluster of C. auris: evidence of Recent Emergence in Italy and Ease of Transmission during the COVID-19 Pandemic. J Fungi. 7(2):140. doi: 10.3390/jof7020140.
  • Dos Santos Souza Marinho R, Duro RLS, Bellini Caldeira D, Galinskas J, Oliveira Mota MT, Hunter J, Rodrigues Teles MdA, de Pádua Milagres FA, Sobhie Diaz R, Shinji Kawakubo F, et al. 2022. Re-emergence of mayaro virus and coinfection with chikungunya during an outbreak in the state of Tocantins/Brazil. BMC Res Notes. 15(1):271. doi: 10.1186/s13104-022-06153-6.
  • Ebola Virus. 2023. Ebola virus disease. [accessed 2023 Sep 15]. https://www.who.int/news-room/fact-sheets/detail/ebola-virus-disease.
  • Eisenberg J. 2023. R0: How scientists quantify the intensity of an outbreak like Coronavirus and Its Pandemic Potential | The Pursuit | University of Michigan School of Public Health | Coronavirus | Pandemic. [accessed 2023 Oct 26]. https://sph.umich.edu/pursuit/2020posts/how-scientists-quantify-outbreaks.html.
  • Elizabethkingia-CDC. 2023. Elizabethkingia | CDC. [accessed 2023 Sep 15]. https://www.cdc.gov/elizabethkingia/index.html.
  • Elizabethkingia-USA. 2023. Elizabethkingia – United States of America. [accessed 2023 Sep 7]. https://www.who.int/emergencies/disease-outbreak-news/item/21-april-2016-elizabethkingia-usa-en.
  • Emerging Infectious Diseases Journal – CDC. 2023. Clinical outcomes of patients treated for Candida auris infections in a multisite health system, Illinois, USA – Volume 26, Number 5 – May 2020 – Emerging Infectious Diseases Journal – CDC.” [accessed 2023 Oct 28]. https://wwwnc.cdc.gov/eid/article/26/5/19-1588_article.
  • Esposito DLA, da Fonseca BAL. 2017. Will Mayaro virus be responsible for the next outbreak of an arthropod-borne virus in Brazil? Braz J Infect Dis. 21(5):540–544. doi: 10.1016/j.bjid.2017.06.002.
  • Estimating Mortality. 2023. Estimating mortality from COVID-19. [accessed 2023 Sep 15]. https://www.who.int/news-room/commentaries/estimating-mortality-from-covid-19.
  • Eyase F, Langat S, Berry IM, Mulwa F, Nyunja A, Mutisya J, Owaka S, Limbaso S, Ofula V, Koka H, 2020. Emergence of a novel chikungunya virus strain bearing the E1: V80A substitution, out of the Mombasa, Kenya 2017–2018 outbreak. PLoS One. 15(11):e0241754. doi: 10.1371/journal.pone.0241754.
  • Fang X, Hu J, Peng Z, Dai Q, Liu W, Liang S, Li Z, Zhang N, Bao C. 2021. Epidemiological and clinical characteristics of severe fever with thrombocytopenia syndrome bunyavirus human-to-human transmission. PLoS Negl Trop Dis. 15(4):e0009037. doi: 10.1371/journal.pntd.0009037.
  • Gaymard A, Frobert E, Lina B, Escuret V. 2017. Human infections caused by A (H7N9) influenza virus: emergence, evolution and pandemic risk. Virologie. 21(6):255–265. doi: 10.1684/vir.2017.0712.
  • Gazal S, Sharma N, Gazal S, Tikoo M, Shikha D, Badroo GA, Rashid M, Lee S-J. 2022. Nipah and Hendra Viruses: deadly Zoonotic Paramyxoviruses with the potential to cause the next pandemic. Pathogens. 11(12):1419. doi: 10.3390/pathogens11121419.
  • González-Candelas F, Shaw M-A, Phan T, Kulkarni-Kale U, Paraskevis D, Luciani F, Kimura H, Sironi M. 2021. One year into the pandemic: short-term evolution of SARS-CoV-2 and emergence of new lineages. Infect Genet Evol. 92:104869. doi: 10.1016/j.meegid.2021.104869.
  • Gowri Sankar S, Mowna Sundari T, Alwin Prem Anand A. 2021. Emergence of Dengue 4 as dominant serotype during 2017 outbreak in South India and associated cytokine expression profile. Front Cell Infect Microbiol. 11:681937. doi: 10.3389/fcimb.2021.681937.
  • Gray GC, Robie ER, Studstill CJ, Nunn CL. 2021. Mitigating future respiratory virus pandemics: new threats and approaches to consider. Viruses. 13(4):637. doi: 10.3390/v13040637.
  • Gupta BP, Singh S, Kurmi R, Malla R, Sreekumar E, Manandhar KD. 2015. Re-emergence of dengue virus serotype 2 strains in the 2013 outbreak in Nepal. Indian J Med Res. 142(Suppl 1): 1–6. doi: 10.4103/0971-5916.176564.
  • Gutu MA, Bekele A, Seid Y, Mohammed Y, Gemechu F, Woyessa AB, Tayachew A, Dugasa Y, Gizachew L, Idosa M, et al. 2021. Another dengue fever outbreak in Eastern Ethiopia – an emerging public health threat. PLoS Negl Trop Dis. 15(1):e0008992. doi: 10.1371/journal.pntd.0008992.
  • Haider N, Vairo F, Ippolito G, Zumla A, Kock RA. 2020. Basic reproduction number of Chikungunya Virus transmitted by Aedes Mosquitoes. Emerg Infect Dis. 26(10):2429–2431. doi: 10.3201/eid2610.190957.
  • Hantavirus Outbreak Toolbox. 2023. Hantavirus Outbreak Toolbox. [accessed 2023 Sep 13]. https://www.who.int/emergencies/outbreak-toolkit/disease-outbreak-toolboxes/hantavirus-outbreak-toolbox.
  • Hasan S, Saeed S. 2022. Monkeypox Disease: an emerging public health concern in the shadow of COVID-19 pandemic: an update. Trop Med Infect Dis. 7(10):283. doi: 10.3390/tropicalmed7100283.
  • He S, Chen M, Wu W, Yan Q, Zhuo Z, Su X, Zhang S, Ge S, Xia N. 2018. An emerging and expanding clade accounts for the persistent outbreak of Coxsackievirus A6-associated hand, foot, and mouth disease in China since 2013. Virology. 518:328–334. doi: 10.1016/j.virol.2018.03.012.
  • Hepatitis A. 2023. Hepatitis A. [accessed 2023 Sep 15]. https://www.who.int/news-room/fact-sheets/detail/hepatitis-a.
  • Holden MTG, Hsu L-Y, Kurt K, Weinert LA, Mather AE, Harris SR, Strommenger B, Layer F, Witte W, de Lencastre H, et al. 2013. A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic. Genome Res. 23(4):653–664. doi: 10.1101/gr.147710.112.
  • Howard-Jones AR, Pham D, Jeoffreys N, Eden J-S, Hueston L, Kesson AM, Nagendra V, Samarasekara H, Newton P, Chen SC-A, et al. 2022. Emerging Genotype IV Japanese Encephalitis Virus Outbreak in New South Wales, Australia. Viruses. 14(9):1853. doi: 10.3390/v14091853.
  • Hu S, Xu H, Meng X, Bai X, Xu J, Ji J, Ying C, Chen Y, Shen P, Zhou Y, et al. 2022. Population genomics of emerging Elizabethkingia anophelis pathogens reveals potential outbreak and rapid global dissemination. Emerg Microbes Infect. 11(1):2590–2599. doi: 10.1080/22221751.2022.2132880.
  • Imran M, Yasmeen R. Dec. 2020. SARS-CoV2 Outbreak: emergence, transmission and clinical features of human Coronaviruses. J Ayub Med Coll Abbottabad. 32(Suppl 4):S710–S713.
  • Jain M, Kumar P, Goel AK. 2016. Emergence of Tetracycline Resistant Vibrio cholerae O1 Biotype El Tor Serotype Ogawa with Classical ctxB Gene from a Cholera Outbreak in Odisha, Eastern India. J Pathog. 2016:1695410–1695416. doi: 10.1155/2016/1695410.
  • Japanese encephalitis. 2023. [accessed 2023 Sep 14]. https://www.who.int/news-room/fact-sheets/detail/japanese-encephalitis.
  • Juscamayta-López E, Valdivia F, Morales S, Donaires LF, Fiestas-Solórzano V, Oré M, Pachas P, León-Janampa N, Gavilán R. 2021. Emergence of ciprofloxacin-resistant Neisseria meningitidis B from asymptomatic carriers during an outbreak in Peru, 2017. J Med Microbiol. 70(1):45. doi: 10.1099/jmm.0.001245.
  • Kabała M, Gofron Z, Aptekorz M, Sacha K, Harmanus C, Kuijper E, Martirosian G. 2021. Clostridioides difficile Ribotype 027 (RT027) outbreak investigation due to the emergence of Rifampicin Resistance Using Multilocus Variable-Number Tandem Repeat Analysis (MLVA). Infect Drug Resist. 14:3247–3254. doi: 10.2147/IDR.S324745.
  • Khan A, Khan M, Ullah S, Wei D-Q. 2021. Hantavirus: the next pandemic we are waiting for? Interdiscip Sci. 13(1):147–152. doi: 10.1007/s12539-020-00413-4.
  • Khan E, Jindal H, Mishra P, Suvvari TK, Jonna S. 2022. The 2021 Zika outbreak in Uttar Pradesh state of India: tackling the emerging public health threat. Trop Doct. 52(4):474–478. doi: 10.1177/00494755221113285.
  • Koul P, Potdar V, Mir H, Chadha M. 2018. The 2015 Outbreak of Severe Influenza in Kashmir, North India: emergence of a New Clade of A/H1n1 Influenza Virus. PLoS Curr. 10:64. doi: 10.1371/currents.outbreaks.519e170f2740fabd4ccd1642ff533364.
  • Kozlov M. 2022. How deadly is monkeypox? What scientists know. Nature. 609(7928):663–663. doi: 10.1038/d41586-022-02931-1.
  • Lai C-C, Hsu C-K, Yen M-Y, Lee P-I, Ko W-C, Hsueh P-R. 2022. Monkeypox: an emerging global threat during the COVID-19 pandemic. J Microbiol Immunol Infect. 55(5):787–794. doi: 10.1016/j.jmii.2022.07.004.
  • Lassa Fever. 2023. Lassa fever. [accessed 2023 Sep 14]. https://www.who.int/news-room/fact-sheets/detail/lassa-fever.
  • Legionellosis. 2023. Legionellosis. [accessed 2023 Sep 14]. https://www.who.int/news-room/fact-sheets/detail/legionellosis.
  • Leung NHL. 2021. Transmissibility and transmission of respiratory viruses. Nat Rev Microbiol. 19(8):528–545. doi: 10.1038/s41579-021-00535-6.
  • Lever RA, Whitty CJM. 2016. Ebola virus disease: emergence, outbreak and future directions. Br Med Bull. 117(1):95–106. doi: 10.1093/bmb/ldw005.
  • Li T, Mbala-Kingebeni P, Naccache SN, Thézé J, Bouquet J, Federman S, Somasekar S, Yu G, Sanchez-San Martin C, Achari A, et al. 2019. Metagenomic next-generation sequencing of the 2014 Ebola Virus Disease Outbreak in the Democratic Republic of the Congo. J Clin Microbiol. 57(9):19. doi: 10.1128/JCM.00827-19.
  • Lindh E, Argentini C, Remoli ME, Fortuna C, Faggioni G, Benedetti E, Amendola A, Marsili G, Lista F, Rezza G, et al. 2019. The Italian 2017 outbreak Chikungunya Virus belongs to an emerging Aedes albopictus-adapted virus cluster introduced from the Indian Subcontinent. Open Forum Infect Dis. 6(1):ofy321. doi: 10.1093/ofid/ofy321.
  • Liu Y, Lillepold K, Semenza JC, Tozan Y, Quam MBM, Rocklöv J. 2020. Reviewing estimates of the basic reproduction number for dengue, Zika and chikungunya across global climate zones. Environ Res. 182:109114. doi: 10.1016/j.envres.2020.109114.
  • Lo Presti A, Vacca P, Neri A, Fazio C, Ambrosio L, Rezza G, Stefanelli P. 2020. Estimates of the reproductive numbers and demographic reconstruction of outbreak associated with C: p 1.5–1,10–8: f 3–6:ST–11(cc11) Neisseria meningitidis strains. Infect Genet Evolut. 84:104360. doi: 10.1016/j.meegid.2020.104360.
  • Lourenço J, Recker M. 2014. The 2012 Madeira dengue outbreak: epidemiological determinants and future epidemic potential. PLoS Negl Trop Dis. 8(8):e3083. doi: 10.1371/journal.pntd.0003083.
  • Luby SP. 2013. The pandemic potential of Nipah virus. Antiviral Res. 100(1):38–43. doi: 10.1016/j.antiviral.2013.07.011.
  • Mayo Clinic. 2023. C. difficile infection – Symptoms and causes. Mayo Clinic. [accessed 2023 Sep 15]. https://www.mayoclinic.org/diseases-conditions/c-difficile/symptoms-causes/syc-20351691.
  • Moore SM. 2021. The current burden of Japanese encephalitis and the estimated impacts of vaccination: combining estimates of the spatial distribution and transmission intensity of a zoonotic pathogen. PLoS Negl Trop Dis. 15(10):e0009385. doi: 10.1371/journal.pntd.0009385.
  • Morens DM, Fauci AS. 2020. Emerging Pandemic Diseases: how we got to COVID-19. Cell. 182(5):1077–1092. doi: 10.1016/j.cell.2020.08.021.
  • Neumann G, Kawaoka Y. 2023. Which virus will cause the next pandemic? Viruses. 15(1):199. doi: 10.3390/v15010199.
  • Nguyen N, Ashong D. 2023. Neisseria Meningitidis. In StatPearls, Treasure Island (FL): StatPearls Publishing. [accessed 2023 Oct 29]. http://www.ncbi.nlm.nih.gov/books/NBK549849/.
  • Nipah Virus. 2023. Nipah virus. [accessed 2023 Oct 27]. https://www.who.int/news-room/fact-sheets/detail/nipah-virus.
  • Non-Polio Enterovirus. 2023. Non-Polio Enterovirus Outbreaks and Surveillance | CDC. [accessed 2023 Sep 21]. https://www.cdc.gov/non-polio-enterovirus/outbreaks-surveillance.html.
  • Nsubuga F, Garang SC, Tut M, Oguttu D, Lubajo R, Lodiongo D, Lasuba M, Mpairwe A. 2019. Epidemiological description of a protracted cholera outbreak in Tonj East and Tonj North counties, former Warrap State, South Sudan, May–Oct 2017. BMC Infect Dis. 19(1):4. doi: 10.1186/s12879-018-3640-5.
  • Olu OO, Lamunu M, Nanyunja M, Dafae F, Samba T, Sempiira N, Kuti-George F, Abebe FZ, Sensasi B, Chimbaru A, et al. 2016. Contact Tracing during an Outbreak of Ebola Virus Disease in the Western Area Districts of Sierra Leone: lessons for Future Ebola Outbreak Response. Front Public Health. 4:130. doi: 10.3389/fpubh.2016.00130.
  • Otto SP, Day T, Arino J, Colijn C, Dushoff J, Li M, Mechai S, Van Domselaar G, Wu J, Earn DJD, et al. 2021. The origins and potential future of SARS-CoV-2 variants of concern in the evolving COVID-19 pandemic. Curr Biol. 31(14):R918–R929. doi: 10.1016/j.cub.2021.06.049.
  • Page MJ, McKenzie JE, Bossuyt PM, Boutron I, Hoffmann TC, Mulrow CD, Shamseer L, Tetzlaff JM, Akl EA, Brennan SE, et al. 2021. The PRISMA 2020 statement: an updated guideline for reporting systematic reviews. BMJ. 372:n71. doi: 10.1136/bmj.n71.
  • Parthasarathy P, Vivekanandan S. 2021. An extensive study on the COVID-19 pandemic, an emerging global crisis: risks, transmission, impacts and mitigation. J Infect Public Health. 14(2):249–259. doi: 10.1016/j.jiph.2020.12.020.
  • Paul D, Mohanty A, Shah A, Kumar Padhi B, Sah R. 2023. Outbreak of an emerging zoonotic Nipah virus: an emerging concern. J Biosaf Biosecur. 5(2):57–59. doi: 10.1016/j.jobb.2023.04.002.
  • PMC Articles. 2023. Estimating the number of hand, foot and mouth disease amongst children aged under-five in Beijing during 2012, based on a telephone survey of healthcare seeking behavior – PMC. [accessed 2023 Oct 28]. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149051/.
  • PMC. 2023. The contribution of databases to the results of systematic reviews: a cross-sectional study – PMC. [accessed 2023 Oct 30]. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5037618/.
  • Quino W, Caro-Castro J, Mestanza O, Hurtado V, Zamudio ML, Cruz-Gonzales G, Gavilan RG. 2022. Emergence and Molecular Epidemiology of Campylobacter jejuni ST-2993 Associated with a Large Outbreak of Guillain-Barré Syndrome in Peru. Microbiol Spectr. 10(5):e0118722. doi: 10.1128/spectrum.01187-22.
  • RahimiRad S, Alizadeh A, Alizadeh E, Hosseini SM. 2016. The avian influenza H9N2 at avian-human interface: a possible risk for the future pandemics. J Res Med Sci. 21:51. doi: 10.4103/1735-1995.187253.
  • Rehman S. 2023. A parallel and silent emerging pandemic: antimicrobial resistance (AMR) amid COVID-19 pandemic. J Infect Public Health. 16(4):611–617. doi: 10.1016/j.jiph.2023.02.021.
  • Reis J, Shaman J. Mar. 2018. Simulation of four respiratory viruses and inference of epidemiological parameters. Infect Dis Model. 3:23–34. doi: 10.1016/j.idm.2018.03.006.
  • Saint-Pierre Contreras G, Conei Valencia D, Lizama L, Vargas Zuñiga D, Avendaño Carvajal LF, Ampuero Llanos S. 2023. An old acquaintance: Could Adenoviruses be our next pandemic threat? Viruses. 15(2):330. doi: 10.3390/v15020330.
  • Schelenz S, Hagen F, Rhodes JL, Abdolrasouli A, Chowdhary A, Hall A, Ryan L, Shackleton J, Trimlett R, Meis JF, et al. 2016. First hospital outbreak of the globally emerging Candida auris in a European hospital. Antimicrob Resist Infect Control. 5(1):35. doi: 10.1186/s13756-016-0132-5.
  • Semantic Scholar. 2023. [PDF] Epidemiological description, case‐fatality rate, and trends of Hantavirus Pulmonary Syndrome: 9 years of surveillance in Argentina | Semantic Scholar. [accessed 2023 Oct 28]. https://www.semanticscholar.org/paper/Epidemiological-description%2C-case%E2%80%90fatality-rate%2C-of-Alonso-Iglesias/47c2024f93e1277bcf937918148e49f00ca548cb.
  • Sharma D, Kamthania M. 2021. A new emerging pandemic of severe fever with thrombocytopenia syndrome (SFTS). Virusdisease. 32(2):220–227. doi: 10.1007/s13337-021-00656-9.
  • Stein RT, Zar HJ. 2023. RSV through the COVID-19 pandemic: burden, shifting epidemiology, and implications for the future. Pediatr Pulmonol. 58(6):1631–1639. doi: 10.1002/ppul.26370.
  • Sutton TC. 2018. The pandemic threat of emerging H5 and H7 Avian influenza viruses. Viruses. 10(9):461. doi: 10.3390/v10090461.
  • Thielen BK, Bye E, Wang X, Maroushek S, Friedlander H, Bistodeau S, Christensen J, Reisdorf E, Shilts MH, Martin K, et al. 2020. Summer outbreak of severe RSV-B disease, Minnesota, 2017 associated with emergence of a genetically distinct viral lineage. J Infect Dis. 222(2):288–297. doi: 10.1093/infdis/jiaa075.
  • Thomas B, Chandran P, Lilabi MP, George B, Sivakumar CP, Jayadev VK, Bindu V, Rajasi RS, Vijayan B, Mohandas A, et al. 2019. Nipah Virus Infection in Kozhikode, Kerala, South India, in 2018: epidemiology of an Outbreak of an Emerging Disease. Indian J Community Med. 44(4):383–387. doi: 10.4103/ijcm.IJCM_198_19.
  • Times Now News. 2023. Virus alert: new contagion passed via tick-bites emerges in China, 7 dead, 60 take ill. [accessed 2023 Oct 27]. https://www.timesnownews.com/international/article/virus-alert-new-contagion-passed-via-tick-bites-emerges-in-china-7-dead-60-take-ill/632475.
  • Tinévez C, Velardo F, Ranc AG, Dubois D, Pailhoriès H, Codde C, Join-Lambert O, Gras E, Corvec S, Neuwirth C, et al. 2022. Retrospective multicentric study on Campylobacter spp. Bacteremia in France: the Campylobacteremia study. Clin Infect Dis. 75(4):702–709. doi: 10.1093/cid/ciab983.
  • Titir SR, Paul SK, Ahmed S, Haque N, Nasreen SA, Hossain KS, Ahmad FU, Nila SS, Khanam J, Nowsher N, et al. 2021. Nationwide distribution of Dengue Virus Type 3 (DENV-3) Genotype I and emergence of DENV-3 genotype III during the 2019 Outbreak in Bangladesh. Trop Med Infect Dis. 6(2):58. doi: 10.3390/tropicalmed6020058.
  • Trombetta C, Piccirella S, Perini D, Kistner O, Montomoli E. 2015. Emerging Influenza strains in the last two decades: A threat of a new pandemic? Vaccines. 3(1):172–185. doi: 10.3390/vaccines3010172.
  • Uwishema O, Alshareif BAA, Yousif MYE, Omer MEA, Sablay ALR, Tariq R, Zahabioun A, Mwazighe RM, Onyeaka H. 2021. Lassa fever amidst the COVID-19 pandemic in Africa: a rising concern, efforts, challenges, and future recommendations. J Med Virol. 93(12):6433–6436. doi: 10.1002/jmv.27219.
  • van Doorn HR. 2021. The epidemiology of emerging infectious diseases and pandemics. Medicine. 49(10):659–662. doi: 10.1016/j.mpmed.2021.07.011.
  • Verywell Health. 2023. Zika Virus facts and statistics: What you need to know. Verywell Health. [accessed 2023 Oct 28]. https://www.verywellhealth.com/zika-virus-facts-and-statistics-what-you-need-to-know-5536835.
  • Walker J, Pyke A, Florian P, Moore F, Smoll N, Adegbija O, Khan A, Hasan R, Carroll H, Harris RR, et al. 2021. Re-emergence of dengue virus in regional Queensland: 2019 dengue virus outbreak in Rockhampton, Central Queensland, Australia. Commun Dis Intell. 45:31. doi: 10.33321/cdi.2021.45.31.
  • Wang J, Zhao S, Chen X, Huang Z, Chong MKC, Guo Z, Javanbakht M, Ran J. 2021. The reproductive number of Lassa fever: a systematic review. J Travel Med. 28(3):taab029. doi: 10.1093/jtm/taab029.
  • Watkins ER, Maiden MCJ. 2017. Metabolic shift in the emergence of hyperinvasive pandemic meningococcal lineages. Sci Rep. 7(1):41126. doi: 10.1038/srep41126.
  • Wayback Machine. 2023. Wayback Machine. [accessed 2023 Oct 26]. https://web.archive.org/web/20201211172704/http://www.who.int/bulletin/volumes/98/9/19-242347.pdf.
  • WHO. 2023. Surveillance in emergencies. [accessed 2023 Nov 07]. https://www.who.int/emergencies/surveillance.
  • WHO.INT. 2023. One health joint plan of action (2022–2026): working together for the health of humans, animals, plants and the environment. [accessed 2023 Sep 07]. https://www.who.int/publications-detail-redirect/9789240059139.
  • Wickes BL. 2020. Analysis of a Candida auris Outbreak Provides New Insights into an Emerging Pathogen. J Clin Microbiol. 58(4):19. doi: 10.1128/JCM.02083-19.
  • Yamamoto C, Ko K, Nagashima S, Harakawa T, Fujii T, Ohisa M, Katayama K, Takahashi K, Okamoto H, Tanaka J, et al. 2019. Very low prevalence of anti-HAV in Japan: high potential for future outbreak. Sci Rep. 9(1):1493. doi: 10.1038/s41598-018-37349-1.
  • Zajmi A, Teo J, Yeo CC. 2022. Epidemiology and characteristics of Elizabethkingia spp. Infections in Southeast Asia. Microorganisms. 10(5):882. doi: 10.3390/microorganisms10050882.
  • Zhang X-S, Iacono GL. 2018. Estimating human-to-human transmissibility of hepatitis A virus in an outbreak at an elementary school in China, 2011. PLoS One. 13(9):e0204201. doi: 10.1371/journal.pone.0204201.
  • Zhang Z, Liu Y, Liu F, Ren M, Nie T, Cui J, Chang Z, Li Z. 2021. Basic reproduction number of Enterovirus 71 and Coxsackievirus A16 and A6: evidence From Outbreaks of Hand, Foot, and Mouth Disease in China Between 2011 and 2018. Clin Infect Dis. 73(9):e2552–e2559. doi: 10.1093/cid/ciaa1853.
  • Zika Virus and Dengue Virus. 2023. Laboratory testing for Zika virus and dengue virus infections: interim guidance. [accessed 2023 Sep 27]. https://www.who.int/publications-detail-redirect/WHO-ZIKV_DENV-LAB-2022.1.

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