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Articles

Effects of eight InDel variants in FHIT on milk traits in Xinjiang brown cattle

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References

  • Fu XF, Ji SL, Huang XX, et al. Correlation and regression analysis of body weight and body size measurements for Xinjiang brown cattle calf under pen feeding. Xinjiang Agri Sci 2009;46:844–848.
  • Fu XF, Wang YC, Guo JQ, et al. Study of adjustment factors for standardizing milking records in Xinjiang brown cattle. Chin J Animal Veterinary Sci 2010;41:536–542.
  • Du W, Zhang Y, Lin HK, et al. Study on body size of Xinjiang brown cattle under the herd condition. Xinjiang Agri Sci 2010;47:401–405.
  • An X, Hou J, Gao T, et al. Single-nucleotide polymorphisms g.151435C > T and g.173057T > C in PRLR gene regulated by bta-miR-302a are associated with litter size in goats. Teriogenology 2015;83(9):1477–1483.
  • Chen MY, Yan HL, Wang K, et al. Goat SPEF2: expression profile, indel variants identification and association analysis with litter size. Theriogenology 2019;139:147–155.
  • Chen MY, Yang WJ, Liu N, et al. Pig Hsd17b3: alternative splice variants expression, insertion/deletion (indel) in promoter region and their associations with male reproductive traits. J Steroid Biochem Mol Biol. 2019;195:105483.
  • Tomas N, Venkatachalapathy T, Aravindakshan T, Raghavan KC. Molecular cloning SNP detection and association analysis of 5′ flanking region of the goat IGF1 gene with prolifcacy. J Anim Reprod Sci. 2016;167:8–15.
  • Lai FN, Zhai HL, Cheng M, et al. Whole-genome scanning for the litter sizetrait associated genes and SNPs under selection in dairy goat (Capra hircus). Sci Rep. 2016;6(1):38096.
  • Mota RR, Guimarães SEF, Fortes MRS, et al. Genome-wide association study and annotating candidate gene networks affecting age at first calving in Nellore cattle. J Anim Breed Genet. 2017;134(6):484–492.
  • Cui Y, Yan H, Wang K, et al. Insertion/deletion within the KDM6A gene is significantly associated with litter size in goat. Front Genet. 2018;9:91.
  • Zhang SH, Sun K, Bian YN, et al. Developmental validation of an X-Insertion/Deletion polymorphism panel and application in HAN population of China. Sci Rep. 2015;5(1):18336.
  • Xu W, He H, Zheng L, et al. Detection of 19-bp deletion within plag1 gene and its effect on growth traits in cattle. Gene 2018;675:144–149.
  • Wang XY, Yang Q, Zhang SH, et al. Genetic effects of single nucleotide polymorphisms in the goat GDF9 gene on prolificacy: true or false positive? Animals 2019;9(11):886.
  • Zhou JH, Liu LY, Chen CPJ, et al. Genome-wide association study milk reproductive traits in dual-purpose Xinjiang brown cattle. BMC Genomics. 2019;20:827.
  • Andersson L. Genetic dissection of phenotypic diversity in farm animals. Nat Rev Genet. 2001;2(2):130–138.
  • Uboldi C, Guidi E, Roperto S, et al. Comparative genomic mapping of the bovine fragile histidine triad (FHIT) tumour suppressor gene: characterization of a 2 Mb BAC contig covering the locus complete annotation of the gene analysis of cDNA and of physiological expression profiles. BMC Genomics. 2006;7(1):123–132.
  • Meo GPD, Perucatti A, Uboldi C, et al. Comparative mapping of the fragile histidine triad (FHIT) gene in cattle river buffalo sheep and goat by FISH and assignment to BTA22 by RH-mapping: a comparison with HSA3. Animal Genet. 2005;36:363–364.
  • Nakagawa Y, Akao Y. FHIT protein inhibits cell growth by attenuating the signaling mediated by nuclear factor-κB in colon cancer cell lines. Exp Cell Res. 2006;312(13):2433–2442.
  • Xu RH, Zheng LY, He DL, et al. Effect of fragile histidine triad gene transduction on proliferation and apoptosis of human hepatocellular carcinoma cells. WJG. 2008;14(23):3754.
  • Kang ZH, Zhang SH, He LB, et al. A 14-bp functional deletion within the CMTM2 geneis significantly associated with litter size in goat. Theriogenology 2019;139:49–57.
  • Yang Q, Zhang SH, Cao XK, et al. Application of mathematical expectation (ME) strategy on detecting the low frequency mutation: an example for evaluating 14 bp InDel of the PRNP gene 3′ UTR in four Chinese indigenous cattle breeds. Prion 2016;10(5):409–419.
  • Lin HK, Zhang Y, Zhou ZY, et al. Relationship between an InDel mutation within the sirt4 gene and growth traits in Chinese cattle. Animal Biotechnol. 2019;30(4):352–357.
  • Peng K, Zhang GL, Yu T, et al. Detection of InDel variations within seven candidate genes and their associations with phenotypic traits in three cattle breeds. Animal Biotechnol. 2019;3:1–9.
  • Lan XY, Zhao HY, Li ZJ, et al. Exploring the novel genetic variant of PITX1 gene and its effect on milk performance in dairy goats. J Integrative Agri. 2013;12(1):118–126.
  • Li J, Zhu XC, Ma L, et al. Detection of a new 20bp insertion/deletion (InDel) within sheep PRND gene using mathematical expectation (ME) method. Prion. 2017;11(2):143–150.
  • Yang Q, Yan HL, Li J, et al. A novel 14-bp duplicated deletion within goat GHR gene is significantly associated with growth traits and litter size. Anim Genet. 2017;48(4):499–500.
  • Li Z, Zhang Z, He Z, et al. A partition-ligation-combination-subdivision EM algorithm for haplotype inference with multiallelic markers: update of the SHEsis (http://analysis.bio-x.cn). Cell Res. 2009;19(4):519–523.
  • Shi YY, He L. SHEsis a powerful software platform for analyses of linkage disequilibrium haplotype construction and genetic association at polymorphism loci. Cell Res. 2005;15:97–98.
  • Ardlie KG, Kruglyak L, Seielstad M. Patterns of linkage disequilibrium in the human genome. Nat Rev Genet. 2002;3(4):299–309.
  • Ren F, Yu S, Chen R, Lan XY, Pan CY. Identification of a novel 12-bp insertion/deletion (InDel) of iPS-related Oct4 gene and its association with reproductive traits in male piglets. Animal Reprod Sci. 2017;178:55–60.
  • Zhang XY, Wu XF, Jia WC, et al. Novel nucleotide variations haplotypes structure and associations with growth related traits of goat at motif-binding factor (ATBF1) gene. Asian Australas J Anim Sci. 2015;28(10):1394–1406.
  • Kang ZH, Jiang EH, Wang K, et al. Goat membrane associated ring-CH-type finger 1 (MARCH1) mRNA expression and association with litter size. Theriogenology 2019;128:8–16.
  • Yang Q, Zhang SL, Li J, et al. Development of a touchdown multiplex PCR method for simultaneously rapidly detecting three novel insertion/deletions (indels) within one gene: an example for goat GHR gene. Animal Biotechnol. 2019;30(4):366–371.
  • Li J, Sarantsetseg E, Zhang SL, et al. Genetic effects of PRNP gene insertion/de letion (InDel) on phenotypic traits in sheep. Prion 2018;12(1):1–12.
  • Zhang YP, Xu X, Chen ZL, Zhao ZH. Association of fhit expression and fhit gene hypermethylation with liver cancer risk: a prisma-compliant meta-analysis. OncoTarget Ther. 2017;10:3083–3093.
  • Liu XP, Yin XH, Yan XH, Zeng XT, Wang XH. The clinical relevance of fragile histidine triad protein (fhit) in patients with bladder cancer. Med Sci Monit. 2018;24(3):3113–3118.
  • Tiegesi M, Zhang HM, Song HT, Jarhin, Su ZQ, Ran DL, Liu JH. Study on expression of CD46 gene in different tissues of Xinjiang brown cattle. China Animal Husbandry & Veterinary Medicine. 2017;44:1790–1795. (In Chinese)

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