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Original Articles

Bioremediation of Poly-Aromatic Hydrocarbon (PAH)-Contaminated Soil by Composting

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Pages 271-332 | Published online: 26 Mar 2009

REFERENCES

  • Ahtiainen , J. , Valo , R. , Järvinen , M. and Joutti , A. 2002 . Microbial toxicity tests and chemical analysis as monitoring parameters at composting of creosote-contaminated soil . Ecotoxicology and Environmental Safety , 53 : 323 – 329 .
  • Al-Daher , R. , Al-Awadhi , N. and El-Nawawy , A. 1998 . Bioremediation of damaged desert environment using the windrow soil pile system in Kuwait . Environ. Int. , 24 : 175 – 180 .
  • Al-Maghrabi , I. M. A. , Bin Aqil , A. O. , Isla , M. R. and Chaalal , O. 1999 . Use of thermophilic bacteria for bioremediation of petroleum contaminants . Energy Sources , 21 : 17 – 29 .
  • Alexopoulos , C. J. , Mims , C. W. and Blackwell , M. 1996 . Introductory Mycology , New York : John Wiley and Sons .
  • Amir , S. , Hafidi , M. , Merlina , G. , Hamdi , H. and Revel , J. C. 2005 . Fate of polycyclic aromatic hydrocarbons during composting of lagooning sewage sludge . Chemosphere , 58 : 449 – 458 .
  • Annweiler , E. , Richnow , H. H. , Antranikian , G. , Hebenbrock , S. , Garms , C. , Franke , S. , Francke , W. and Michaelis , W. 2000 . Naphthalene degradation and incorporation of naphthalene-derived carbon into biomass by the thermophilic Bacillus thermoleovorans. . Appl. Environ. Microbiol. , 66 : 518 – 523 .
  • Antizar-Ladislao , B. , Lopez-Real , J. and Beck , A. 2004 . Bioremediation of polycyclic aromatic hydrocarbon (PAH)-contaminated waste using composting approaches . Critical Reviews in Environmental Science and Technology , 34 : 249 – 289 .
  • Antizar-Ladislao , B. , Lopez-Real , J. and Beck , A. J. 2005a . In-vessel composting-bioremediation of aged coal tar soil: Effect of temperature and soil/green waste amendment ratio . Environment International , 31 : 173 – 178 .
  • Antizar-Ladislao , B. , Lopez-Real , J. and Beck , A. J. 2005b . Laboratory studies of the remediation of polycyclic aromatic hydrocarbon contaminated soil by in-vessel composting . Waste Management , 25 : 281 – 289 .
  • Antizar-Ladislao , B. , Lopez-Real , J. and Beck , A. J. 2006 . Degradation of polycyclic aromatic hydrocarbons (PAHs) in an aged coal tar contaminated soil under in-vessel composting conditions . Environmental Pollution , 141 : 459 – 468 .
  • Atagana , H. I. 2004 . Co-composting of PAH-contaminated soil with poultry manure . Letters Appl. Microbiol. , 39 : 163 – 168 .
  • Atlas , R. M. 1981 . Microbial degradation of petroleum hydrocarbons: An environmental perspective . Microbial Rev. , 45 : 180 – 209 .
  • Babaarslan , C. , Tekeli , A. and Mehmetoglu , T. 2003 . Biodegradation of BTEX compounds by a mixed culture obtained from petroleum formation water . Energy Sources , 25 : 733 – 742 .
  • Balba , M. T. , Al-Daher , R. , Al-Awadhi , N. , Chino , T. and Tsuji , H. 1998 . Bioremediation of oil-contaminated desert soil: The Kuwaiti experience . Environ Int. , 24 : 163 – 173 .
  • Bamforth , S. M. and Singleton , I. 2005 . Bioremediation of polycyclic aromatic hydrocarbons: Current knowledge and future directions . J. Chem. Technol. Biotechnol. , 80 : 723 – 736 .
  • Barker , A. V. and Bryson , G. M. 2002 . Bioremediation of heavy metals and organic toxicants by composting . The Scientific World Journal , 2 : 407 – 420 .
  • Barnsley , E. A. 1975 . The bacterial degradation of fluoranthene and benzo[a]pyrene . Can. J. Microbiol. , 21 : 1004 – 1008 .
  • Beaudin , N. , Caron , R. F. , Legros , R. , Ramsay , J. and Ramsay , B. 1999 . Identification of the key factors affecting composting of a weathered hydrocarbon-contaminated soil . Biodegradation , 10 : 127 – 133 .
  • Becker , P. M. and Dott , W. 1995 . Functional analysis of communities of aerobic heterotrophic bacteria from hydrocarbon-contaminated sites . Microbial Ecology , 30 : 285 – 296 .
  • Bezalel , L. , Hadar , Y. and Cerniglia , C. E. 1996 . Mineralization of polycyclic aromatic hydrocarbons by the white rot fungusPleurotus ostreatus. . Appl. Environm. Microbiol. , 62 : 292 – 295 .
  • Bodour , A. A. , Wang , J.-M. , Brusseau , M. L. and Maier , R. M. 2003 . Temporal change in culturable phenanthrene degraders in response to long-term exposure to phenanthrene in a soil column system . Environmental Microbiology , 5 : 888 – 895 .
  • Bogan , B. W. , Lahner , L. M. , Sullivan , W. R. and Paterek , J. R. 2003 . Degradation of straight-chain aliphatic and high-molecular-weight polycyclic aromatic hydrocarbons by a strain of Mycobacterium austroafricanum. . J. Appl. Microbiol. , 94 : 230 – 239 .
  • Boldrin , B. , Tiehm , A. and Fritzsche , C. 1993 . Degradation of phenanthrene, fluorene, fluoranthene, and pyrene by a Mycobacterium sp. . Appl. Environ. Microbiol. , 59 : 1927 – 1930 .
  • Boonchan , S. , Britz , M. L. and Stanley , G. A. 2000a . Degradation and mineralization of high-molecular-weight polycyclic aromatic hydrocarbons by defined fungal-bacterial cocultures . Appl Environ Microbiol. , 66 : 1007 – 1019 .
  • Boonchan , S. , Britz , M. L. and Stanley , G. A. 2000b . Surfactant-enhanced biodegradation of high molecular weight polycyclic aromatic hydrocarbons by Stenotrophomonas maltophilia. . Biotechnol Bioeng. , 59 : 482 – 494 .
  • Bosch , R. , Garcia-Valdez , E. and Moore , E. R. B. 1999 . Genetic characterization and evolutionary implications of a chromosomally encoded naphthalene-degradation upper pathway from Pseudomonas stutzeri AN10 . Gene , 236 : 149 – 157 .
  • Bossert , I. and Bartha , R. 1984 . “ The fate of petroleum in soil ecosystems ” . In Petroleum Microbiology , Edited by: Atlas , R. M. 435 – 473 . New York : Macmillan .
  • Boxall , A. B. A. and Maltby , L. 1997 . The effects of motorway runoff on freshwater ecosystems. (3). Toxicant confirmation . Arch. Environ. Contam. Toxicol. , 33 : 9 – 16 .
  • Boyle , C. D. , Kropp , B. R. and Reid , I. D. 1992 . Solubilization and mineralization of lignin by white rot fungi . Appl Environ Microbiol. , 58 : 3217 – 3224 .
  • Brook , T. R. , Stiver , W. H. and Zytner , R. G. 2001 . Biodegradation of diesel fuel in soil under various nitrogen addition regimes . Soil and Sediment Contamination , 10 : 539 – 553 .
  • Bumpus , J. A. 1989 . Biodegradation of polycyclic aromatic hydrocarbons by Phanerochaete chrysosporium. . Appl. Environ. Microbiol. , 55 : 154 – 158 .
  • Bumpus , J. A. , Tien , M. , Wright , D. and Aust , S. D. 1985 . Oxidation of persitent environmental pollutants by a white-rot fungus . Science , 228 : 1434 – 1436 .
  • Buswell , J. A. 1991 . “ Fungal degradation of lignin ” . In Handbook of Applied Mycology, vol. 1: Soils and plants , Edited by: Arora , D. K. , Rai , B. , Mukerji , K. G. and Knudsen , G. R. 425 – 480 . New York : Marcel Dekker Inc. .
  • Cameotra , S. S. and Bollag , J.-M. 2003 . Biosurfactant-enhanced bioremediation of polycyclic aromatic hydrocarbons . Critical Reviews in Environmental Science and Technology , 30 : 111 – 126 .
  • Canet , R. , Birnstingl , J. G. , Malcolm , D. G. , Lopez-Real , J. M. and Beck , A. J. 2001 . Biodegradation of polycyclic aromatic hydrocarbons (PAHs) by native microflora and combinations of white-rot fungi in a coal-tar contaminated soil . Bioresource Technology , 76 : 113 – 117 .
  • Carmichael , L. M. and Pfaender , F. K. 1997 . Polynuclear aromatic hydrocarbon metabolism in soils: Relationship to soil characteristics and preexposure . Environmental Toxicology and Chemistry , 16 : 666 – 675 .
  • Cases , I. and de Lorenzo , V. 2005 . Genetically modified organisms for the environment: stories of success and failure and what we have learned from them . International Microbiology , 8 : 213 – 222 .
  • Cerniglia , C. E. 1984 . Microbial metabolism of polycyclic aromatic hydrocarbons . Advances Appl. Microbiol. , 30 : 31 – 71 .
  • Cerniglia , C. E. 1992 . Biodegradation of polycyclic aromatic hydrocarbons . Biodegradation , 3 : 315 – 368 .
  • Cerniglia , C. E. 1997 . Fungal metabolism of polycyclic aromatic hydrocarbons: Past, present, and future applications in bioremediation . Journal of Industrial Microbiology & Biotechnology , 19 : 324 – 333 .
  • Cerniglia , C. E. and Heitkamp , M. A. 1990 . Polycyclic aromatic hydrocarbon degradation by Mycobacterium. . Methods Enzymol. , 188 : 148 – 153 .
  • Cerniglia , C. E. , Sutherland , J. B. and Crow , S. A. 1992 . “ Fungal metabolism of aromatic hydrocarbons ” . In Microbial Degradation of Natural Products , Edited by: Winkelmann , G. 193 – 217 . Weinheim, , Germany : VCH Press .
  • Cerniglia , C. E. , White , G. L. and Heflich , R. H. 1985 . Fungal metabolism and detoxification of polycyclic aromatic hydrocarbons . Arch. Microbiol. , 143 : 105 – 110 .
  • Chaney , R. L. , Ryan , J. A. and O'Connor , G. A. 1996 . Organic contaminants in municipal biosolids: Risk assessment, quantitative pathways, analysis, and current research topics . Sci. Total Environ. , 185 : 187 – 216 .
  • Chung , K. H. , Lee , J. H. and Ro , K. S. 2000 . Composting of kerosene-contaminated soil: Fate of kerosene . J. Environ. Sci. Health Part A , 35 : 1183 – 1194 .
  • Civilini , M. 1994 . Fate of creosote compounds during composting . Microbiol. Eur. , 2 : 16 – 24 .
  • Collins , P. J. and Dobson , A. D. W. 1995 . Extracellular lignin and manganese peroxidase production by the white rot fungus Coriolus versicolor 290 . Biotechnol. Lett. , 17 : 989 – 992 .
  • Collins , P. J. and Dobson , A. D. W. 1996 . Oxidation of fluorene and phenanthrene by Mn(II) dependent peroxidase activity in whole cultures of Trametes (Coriolus) versicolor. . Biotechnology Letters , 18 : 801 – 804 .
  • Composting Council of Canada . Setting the standard: A summary of compost standards in Canada Available at: http://www.compost.org/standard.htm (accessed December 6, 2006)
  • Cousins , I. T. and Jones , K. C. 1998 . Air–soil exchange of semi-volatile organic compounds (SOCs) in the UK . Environmental Pollution , 102 : 105 – 118 .
  • Culp , S. J. , Gaylor , D. W. , Sheldon , W. G. , Goldstein , L. S. and Beland , F. A. 1998 . A comparison of the tumors induced by coal tar and benzo[a]pyrene in a two-year bioassay . Carcinogenesis , 19 : 117 – 124 .
  • Daly , J. W. , Jerina , D. M. and Witkop , B. 1972 . Arene oxides and the NIH shift: The metabolism, toxicity and carcinogenicity of aromatic compounds . Experientia , 28 : 1129 – 1149 .
  • Deacon , J. W. 2005 . “ Wood decay, and wood-rotting fungi ” . In Fungal Biology, , 4th ed. , Blackwell Publishing . Available at: http://www.helios.bto.ed.ac.uk/bto/FungalBiology/index.htm
  • Dean-Ross , D. , Moody , J. D. , Freeman , J. P. , Doerge , D. R. and Cerniglia , C. E. 2001 . Metabolism of anthracene by a Rhodococcus species . FEMS Microbiol. Lett. , 204 : 205 – 211 .
  • Edwards , N. T. 1983 . Polycyclic aromatic hydrocarbons (PAHs) in the terrestrial environment: A review . J. Environ. Qual. , 12 : 427 – 441 .
  • Eggen , T. and Sveum , P. 1999 . Decontamination of aged creosote polluted soil: The influence of temperature, white rot fungus Pleurotus ostreatus, and pre-treatment . International Biodeterioration & Biodegredation , 43 : 125 – 133 .
  • European Commission . 1999 . Council directive 1999/31/EC of 26 April 1999 on the landfill of waste . Official Journal L , 182 : 1 – 19 .
  • Evans , W. C. , Fernley , H. N. and Griffiths , E. 1965 . Oxidative metabolism of phenanthrene and anthracene by soil pseudomonads . Biochem. J. , 95 : 819 – 831 .
  • Faison , B. D. and Kirk , T. K. 1985 . Factors involved in the regulation of ligninase activity in Phanerochaete chrysosporium. . Appl. Environ. Microbiol. , 46 : 1140 – 1145 .
  • Fernando , T. and Aust , S. 1994 . “ Biodegradation of toxic chemicals by white rot fungi ” . In Biological Degradation and Bioremediation of Toxic Chemicals , Edited by: Rasul Chaudhry , G. Portland, Ore. : Dioscorides Press .
  • Field , J. A. , de Jong , E. , Costa , G. F. and de Bont , J. A. M. 1992 . Biodegradation of polycyclic aromatic hydrocarbons by new isolates of white rot fungi . Appl. Environ. Microbiol. , 58 : 2219 – 2226 .
  • Freeman , D. J. and Cattell , C. R. 1990 . Woodburning as a source of atmospheric polycyclic aromatic hydrocarbons . Environ. Sci. Technol. , 24 : 1581 – 1585 .
  • Geiselbrecht , A. D. , Hedlund , B. P. , Tichi , M. A. and Staley , J. T. 1998 . Isolation of marine polycyclic aromatic hydrocarbon (PAH)-degrading cycloclasticus strains from the Gulf of Mexico and comparison of their PAH degradation ability with that of Puget Sound cycloclasticus strains . Appl. Environ. Microbiol. , 64 : 4703 – 4710 .
  • Gentry , T. J. , Rensing , C. and Pepper , I. L. 2004 . New approaches for bioaugmentation as a remediation technology . Critical Reviews in Environmental Science and Technology , 34 : 447 – 494 .
  • Gibson , D. T. , Mahadevan , V. , Jerina , D. M. , Yagi , H. and Yeh , H. 1975 . Oxidation of the carcinogens benzo[a]pyrene and benzo[a]anthracene to dihydrodiols by a bacterium . Science , 189 : 295 – 297 .
  • Gibson , D. T. and Subramanian , V. 1984 . “ Microbial degradation of aromatic hydrocarbons ” . In Microbial Degradation of Organic Compounds , Edited by: Gibson , D. T. 181 – 282 . New York : Dekker .
  • Goyal , A. K. and Zylstra , G. J. 1996 . Molecular cloning of novel genes for polycyclic aromatic hydrocarbon degradation from Comamonas testosteroni GZ 39 . Appl. Environ. Microbiol. , 62 : 230 – 236 .
  • Grifoll , M. , Selifonov , S. A. , Gatlin , C. V. and Chapman , P. J. 1995 . Actions of a versatile fluorene-degrading bacterial isolate on polycyclic aromatic compounds . Appl. Environ. Microbiol. , 61 : 3711 – 3723 .
  • Grotenhuis , T. , Field , J. , Wasseveld , R. and Rulkens , W. 1999 . Biodegradation of polyaromatic hydrocarbons (PAH) in polluted soil by the white-rot fungus Bjerkandera. . Journal of Chemical Technology & Biotechnology , 71 : 359 – 360 .
  • Guerin , T. F. 2000 . The differential removal of aged polycyclic aromatic hydrocarbons from soil during bioremediation . Environ. Sci. Pollut. Res. , 7 : 19 – 26 .
  • Hackenbush , H. Z. 2004 . Remediation techniques. contaminated land Available at: http://www.contaminatedland.co.uk/site-inv/site-001.htm (accessed November 16, 2006)
  • Haemmerli , S. D. , Leisola , M. S. A. , Sanglard , D. and Fiechter , A. 1986 . Oxidation of benzo[a]pyrene by extracellular ligninase of Phanerochaete chrysosporium: Veratryl alcohol and stability of ligninase . J. Biol. Chem. , 261 : 6900 – 6903 .
  • Hamann , C. , Hegemann , J. and Hildebrandt , A. 1999 . Detection of polycyclic aromatic hydrocarbon degradation genes in different soil bacteria by polymerase chain reaction and DNA hybridization . FEMS Microbiol. Lett. , 173 : 255 – 263 .
  • Hannink , N. , Rosser , S. J. , French , C. E. , Basran , A. , Murray , J. A. H. , Nicklin , S. and Bruce , N. C. 2001 . Phytodetoxification of TNT by transgenic plants expressing a bacterial nitroreductase . Nat. Biotechnol. , 19 : 1168 – 1172 .
  • Harayama , S. 1997 . Polycyclic aromatic hydrocarbon bioremediation design . Current Opinion in Biotechnology , 8 : 268 – 274 .
  • Harvey , S. , Elashvili , I. , Valdes , J. , Kamely , D. and Chakrabarty , A. M. 1990 . Enhanced removal of Exxon Valdez spilled oil from Alaskan gravel by a microbial surfactant . Biotechnology Advances , 8 : 228 – 230 .
  • Hatakka , A. 1994 . Lignin-modifying enzymes from selected white-rot fungi: Production and role in lignin degradation . FEMS Microbiol. Rev. , 13 : 125 – 135 .
  • Haugland , R. A. , Schlemm , D. J. , Lyons , R. P. III , Sferra , P. R. and Chakrabarty , A. M. 1990 . Degradation of the chlorinated phenoxyacetate herbicides 2,4-dichlorophenoxyacetic acid and 2,4,5-trichlorophenoxyacetic acid by pure and mixed bacterial cultures . Appl. Environ. Microbiol. , 56 : 1357 – 1362 .
  • Heitkamp , M. A. , Franklin , W. and Cerniglia , C. E. 1988a . Microbial metabolism of polycyclic aromatic hydrocarbons: Isolation and characterization of a pyrene-degrading bacterium . Appl. Environ. Microbiol. , 54 : 2549 – 2555 .
  • Heitkamp , M. A. , Freeman , J. P. , Miller , D. W. and Cerniglia , C. E. 1988b . Pyrene degradation by a Mycobacterium sp.: Identification of ring oxidation and ring fission products . Applied and Environmental Microbiology , : 2556 – 2565 .
  • Higgins , I. J. and Gilbert , P. D. 1978 . “ The biodegradation of hydrocarbons ” . In The Crude Oil Industry and Microbial Ecosystems , Edited by: Chater , K. W. A. and Somerville , J. H. 80 – 117 . London : Heydon and Son Ltd .
  • Illman , D. L. 1993 . Hazardous waste treatment using fungus enters marketplace . Chem. Eng. News , 12 : 26 – 29 .
  • In der Wiesche , C. , Martens , R. and Zadrazil , F. 1996 . Two-step degradation of pyrene by white rot fungi and soil microorganisms . Appl. Microbiol. Biotechnol. , 46 : 653 – 659 .
  • International Agency of Research on Cancer (IARC) . 1983 . “ Polynuclear aromatic compounds ” . In IARC Monographs on the Evaluation of Carcinogenic Risks to Humans , Lyon, , France : IARC .
  • Jacob , J. , Karcher , W. , Beiliardo , J. J. and Wagstaffe , P. J. 1986 . Polycyclic aromatic hydrocarbons of environmental and occupational importance . Fresenius. Z. Anal. Chem. , 323 : 1 – 10 .
  • Jacques , R. J. S. , Santos , E. C. , Bento , F. M. , Peralba , M. C. R. , Selbach , P. A. , Sa , E. L. S. and Camargo , F. A. O. 2005 . Anthracene biodegradation by Pseudomonas sp. isolated from a petrochemical sludge landfarming site . International Biodeterioration & Biodegradation , 56 : 143 – 150 .
  • James , T. Y. and O'Donnell , K. 2004 . Zygomycota, microscopic ‘pin’ or ‘sugar’ molds Available at: http://tolweb.org/Zygomycota/20518/2004.12.21, http://tolweb.org/ (Version 21 December 2004), part of The Tree of Life Web Project
  • Jobson , A. M. , Cook , F. D. and Westlake , D. W. S. 1974 . Effect of amendments on the microbial utilization of oil applied to soil . Appl. Microbiol. Biotechnol. , 27 : 166 – 171 .
  • Juhasz , A. L. , Britz , M. L. and Stanley , G. A. 1996 . Degradation of high molecular weight polycyclic aromatic hydrocarbons by Pseudomonas cepacia. . Biotechnology Letters , 18 : 577 – 582 .
  • Kaal , E. E. J. , Field , J. A. and Joyce , T. W. 1995 . Increasing ligninolytic enzyme activities in several white-rot basidiomycetes by nitrogen sufficient media . Bioresource Technol. , 53 : 133 – 139 .
  • Kaal , E. E. J. , Jong , E. D. and Field , J. A. 1993 . Stimulation of ligninolytic peroxidases activity by nitrogen in the white rot fungus Bjerkandera sp. strain BOS55 . Appl. Environ. Microbiol. , 59 : 4031 – 4036 .
  • Kanaly , R. A. and Harayama , S. 2000 . Biodegradation of high-molecular-weight polycyclic aromatic hydrocarbons by bacteria . Journal of Bacteriology , 182 : 2059 – 2067 .
  • Karl , R. and Ranne , O. 1999 . Waste management in the European Union: National self-sufficiency and harmonization at the expense of economic efficiency? . Environmental Management , 23 : 145 – 154 .
  • Kästner , M. , Breuer-Jammali , M. and Mahro , B. 1998 . Impact of inoculation protocols, salinity, and pH on the degradation of polycyclic aromatic hydrocarbons (PAHs) and survival of PAH-degrading bacteria introduced into soil . Appl. Environ. Microbiol. , 64 : 359 – 362 .
  • Kästner , M. , Lotter , S. , Heerenklage , J. , Breuer-Jammali , M. , Stegmann , R. and Mahro , B. 1995 . Fate of 14C-labeled anthracene and hexadecane in compost-manured soil . Applied Microbiology and Biotechnology , 43 : 1128 – 1135 .
  • Kästner , M. and Mahro , B. 1996 . Microbial degradation of polycyclic aromatic hydrocarbons in soils affected by the organic matrix of compost . Applied Microbiology and Biotechnology , 44 : 668 – 675 .
  • Kästner , M. , Streibich , S. , Beyrer , M. , Richnow , H. H. and Fritsche , W. 1999 . Formation of bound residues during microbial degradation of [14C]anthracene in soil . Appl. Environ. Microbiol. , 65 : 1834 – 1842 .
  • Kazerouni , N. , Sinha , R. , Hsu , C. H. , Greenberg , A. and Rothman , N. 2001 . Analysis of 200 food items for benzo[a]pyrene and estimation of its intake in an epidemiologic study . Food Chem. Toxicol. , 39 : 423 – 436 .
  • Keum , Y.-S. , Seo , J.-S. , Hu , Y. and Li , Q. X. 2006 . Degradation pathways of phenanthrene by Sinorhizobium sp. C4 . Appl. Microbiol. Biotechnol. , 71 : 935 – 941 .
  • Kirchmann , H. and Ewnetu , W. 1998 . Biodegradation of petroleum-based oil wastes through composting . Biodegradation , 9 : 151 – 156 .
  • Koeber , R. , Bayona , J. M. and Niessner , R. 1999 . Determination of benzo[a]pyrene diones in air particulate matter with liquid chromatography mass spectrometry . Environ. Sci. Technol. , 33 : 1552 – 1558 .
  • Lambert , M. , Kremer , S. , Sterner , O. and Anke , H. 1994 . Metabolism of pyrene by the basidiomycete Crinipellis stipitaria and identification of pyrenequinones and their hydroxylated precursors in strain JK375 . Appl. Environ. Microbiol. , 60 : 3597 – 3601 .
  • Lange , B. , Kremer , S. , Sterner , O. and Anke , H. 1994 . Pyrene metabolism inCrinipellis stipitaria: Identification of trans-4,5-dihydro-4,5-dihydroxypyrene and 1-pyrenylsulfate in strain JK364 . Appl. Environ. Microbiol. , 60 : 3602 – 3607 .
  • Langworthy , D. E. , Stapleton , R. D. , Sayler , G. S. and Findlay , R. H. 1998 . Genotypic and phenotypic responses of a riverine microbial community to polycyclic aromatic hydrocarbon contamination . Appl. Environ. Microbiol. , 64 : 3422 – 3428 .
  • Leahy , J. G. and Colwell , R. R. 1990 . Microbial degradation of hydrocarbons in the environment . Microbiol. Rev. , 54 : 305 – 315 .
  • Leatham , F. and Kirk , T. K. 1983 . Regulation of ligninolytic activity by nutrient nitrogen in white rot basidiomycetes . FEMS Microbiol. Lett. , 16 : 65 – 67 .
  • Lee , K. , Tremblay , G. H. , Gauthier , J. , Cobanli , S. E. and Griffin , M. . Bioaugmentation and biostimulation: A paradox between laboratory and field results . Proceedings of 1997 International Oil Spill Conference . pp. 697 – 705 . Washington, DC : American Petroleum Institute .
  • Lee , W.-Y. , Iannucci-Berger , W. , Eitzer , B. D. , White , J. C. and Incorvia Mattina , M. J. 2003 . Persistent organic pollutants in the environment: Chlordane residues in compost . J. Environ. Qual. , 32 : 224 – 231 .
  • Leisinger , T. and Brunner , W. 1986 . “ Poorly degradable substances ” . In Biotechnology: Microbial Degradations , Edited by: Schonborn , W. 475 – 513 . Weinheim, , Germany : Wiley-VCH Verlag .
  • Li , G. , Huang , W. , Lerner , D. N. and Zhang , X. 2000 . Enrichment of degrading microbes and bioremediation of petrochemical contaminants in polluted soil . Wat. Res. , 34 : 3845 – 3853 .
  • Lim , L. H. , Harrison , R. M. and Harrad , S. 1999 . The contribution of traffic to atmospheric concentrations of polycyclic aromatic hydrocarbons . Environ. Sci. Technol. , 33 : 3538 – 3542 .
  • MacNaughton , S. J. , Stephen , J. R. , Venosa , A. D. , Davis , G. A. , Chang , Y.-J. and White , D. C. 1999 . Microbial population changes during bioremediation of an experimental oil spill . Appl. Environ. Microbiol. , 65 : 3566 – 3574 .
  • Madsen , T. and Kristensen , P. 1997 . Effects of bacterial inoculation and nonionic surfactants on degradation of polycyclic aromatic hydrocarbons in soil . Environmental Toxicology and Chemistry , 16 : 631 – 637 .
  • Manilal , V. B. and Alexander , M. 1991 . Factors affecting the microbial degradation of phenanthrene in soil . Applied Microbiology and Biotechnology , 35 : 401 – 405 .
  • Márquez-Rocha , F. J. , Hernández-Rodríguez , V. Z. and Vázquez-Duhalt , R. 2000 . Biodegradation of soil-adsorbed polycyclic aromatic hydrocarbons by the white rot fungus Pleurotus ostreatus. . Biotechnology Letters , 22 : 469 – 472 .
  • McFarland , M. J. and Qiu , X. J. 1995 . Removal of benzo(a)pyrene in soil composting systems amended with the white rot fungus Phanerochaete chrysosporium. . J. Hazard Mater. , 42 : 61 – 70 .
  • McFarland , M. J. , Qiu , X. J. , Sims , J. L. , Randolph , M. E. and Sims , R. C. 1992 . Remediation of petroleum impacted soils in fungal compost bioreactors . Water Sci. Technol. , 25 : 197 – 206 .
  • Mrozik , A. , Piotrowska-Seget , Z. and Labuzek , S. 2003 . Bacterial degradation and bioremediation of polycyclic aromatic hydrocarbons . Polish Journal of Environmental Studies , 12 : 15 – 25 .
  • Mueller , J. G. , Chapman , P. J. , Blattmann , B. O. and Pritchard , P. H. 1990 . Isolation and characterization of a fluoranthene-utilizing strain of Pseudomonas paucimobilis. . Appl. Environ. Microbiol. , 56 : 1079 – 1086 .
  • Müller , R. , Antranikian , G. , Maloney , S. and Sharp , R. 1998 . “ Thermophilic degradation of environmental pollutants ” . In Biotechnology of Extremophiles , Edited by: Antranikian , G. 155 – 169 . Berlin, Heidelberg, New York : Springer, Advances in Biochemical Engineering/Biotechnology .
  • Mutzel , A. , Reinscheid , U. M. , Antranikian , G. and Müller , R. 1996 . Isolation and characterization of a thermophilic Bacillus strain, that degrades phenol and cresols as sole carbon source at 70°C . Appl Microbiol Biotechnol. , 46 : 593 – 596 .
  • Naylor , S. , Gan , L. S. , Day , B. W. , Pastorelli , R. , Skipper , P. L. and Tannenbaum , S. R. 1990 . Benzo[a]pyrene diol epoxide adduct formation in mouse and human hemoglobin: Physiochemical basis for dosimetry . Chem. Res. Toxicol. , 3 : 111 – 117 .
  • Palleroni , N. J. , Port , A. M. , Chang , H.-K. and Zylstra , G. J. 2004 . Hydrocarboniphaga effusa gen. nov., sp. nov., a novel member of the gamma-Proteobacteria active in alkane and aromatic hydrocarbon degradation . Int. J. Syst. Evol. Microbiol. , 54 : 1203 – 1207 .
  • Park , K. S. , Sims , R. C. , Dupont , R. R. , Doucette , W. J. and Matthews , J. E. 1990 . Fate of PAH compounds in two soil types. Influence of volatilization, abiotic loss and biological activity . Environmental Toxicology and Chemistry , 9 : 187 – 195 .
  • Pickard , M. A. , Roman , R. , Tinoco , R. and Vazquez-Duhalt , R. 1999 . Polycyclic aromatic hydrocarbon metabolism by white rot fungi and oxidation by Coriolopsis gallica UAMH 8260 Laccase . Appl. Environ. Microbiol. , 65 : 3805 – 3809 .
  • Pinyakong , O. , Habe , H. , Kouzuma , A. , Nojiri , H. , Yamane , H. and Omori , T. 2004 . Isolation and characterization of genes encoding polycyclic aromatic hydrocarbon dioxygenase from acenaphthene and acenaphthylene degrading Sphingomonas sp strain A4 . FEMS Microbiology Letters , 238 : 297 – 305 .
  • Pitt , R. , Field , R. , Lalor , M. and Brown , M. 1995 . Urban stormwater toxic pollutants: Assessment, sources, and treatability . Water Environ. Res. , 67 : 260 – 275 .
  • Rainey , P. B. and Travisano , M. 1998 . Adaptive radiation in a heterogeneous environment . Nature , 394 : 69 – 72 .
  • Ringelberg , D. B. , Talley , J. W. , Perkins , E. J. , Tucker , S. G. , Luthy , R. G. , Bouwer , E. J. and Fredrickson , H. L. 2001 . Succession of phenotypic, genotypic, and metabolic community characteristics during in vitro bioslurry treatment of polycyclic aromatic hydrocarbon-contaminated sediments . Appl. Environ. Microbiol. , 67 : 1542 – 1550 .
  • Rugh , C. L. , Senecoff , J. F. , Meagher , R. B. and Merkle , S. A. 1998 . Development of transgenic yellow poplar for mercury phytoremediation . Nat. Biotechnol. , 16 : 925 – 928 .
  • Sack , U. and Fritsche , W. 1996 . Enhancement of pyrene mineralization in soil by wood-decaying fungi . FEMS Microbiology Ecology , 22 : 77 – 83 .
  • Sack , U. and Günther , T. 1993 . Metabolism of PAH by fungi and correlation with extracellular enzymatic activities . J. Basic Microbiol. , 33 : 269 – 277 .
  • Samanta , S. K. , Singh , O. V. and Jain , R. K. 2002 . Polycyclic aromatic hydrocarbons: Environmental pollution and bioremediation . Trends in Biotechnology , 20 : 243 – 248 .
  • Sander , L. C. and Wise , S. A. 1997 . Polycyclic aromatic hydrocarbon structure index 105 Available at: http://ois.nist.gov/pah/ NIST Special Publication SP 922 (accessed November 16, 2006)
  • Sanglard , D. , Leisola , M. S. A. and Fiechter , A. 1986 . Role of extracellular ligninases in biodegradation of benzo[a]pyrene by Phanerochaete chrysosporium. Enzyme Microb. . Technol. , 8 : 209 – 212 .
  • ŠaŠek , V. , Cajthaml , T. and Bhatt , M. 2003 . Use of fungal technology in soil remediation: A case study . Water Air Soil Pollution , 3 : 5 – 14 .
  • Saunders , C. R. , Shockley , D. C. and Knuckles , M. E. 2001 . Behavioral effects induced by acute exposure to benzo[a]pyrene in F-344 rats . Neurotox. Res. , 3 : 557 – 579 .
  • Šepic , E. , Bricelj , M. and Leskovšek , H. 1998 . Degradation of fluoranthene by Pasteurella sp. IFA and Mycobacterium sp. PYR-1: Isolation and identification of metabolites . Journal of Applied Microbiology , 85 : 746
  • Shimizu , Y. , Nakatsuru , Y. , Ichinose , M. , Takahashi , Y. , Kume , H. , Mimura , J. , Fujii-Kuriyama , Y. and Ishikawa , T. 2000 . Benzo[a]pyrene carcinogenicity is lost in mice lacking the aryl hydrocarbon receptor . Proc. Natl. Acad. Sci. USA , 97 : 779 – 782 .
  • Shimura , M. , Mukerjee-Dhar , G. , Kimbara , K. , Nagato , H. , Kiyohara , H. and Hatta , T. 1999 . Isolation and characterization of a thermophilic Bacillus sp. JF8 capable of degrading polychlorinated biphenyls and naphthalene . FEMS Microbiol. Lett. , 178 : 87 – 93 .
  • Sims , J. L. , Sims , R. C. and Matthews , J. E. 1990 . Approach to bioremediation of contaminated soil . Hazard. Waste Hazard. Mater. , 7 : 117 – 149 .
  • Singh , A. K. , Spassova , D. and White , T. 1998 . Quantitative analysis of polychlorinated biphenyls, organochlorine insecticides, polycyclic aromatic hydrocarbons, polychlorinated hydrocarbons and polynitrohydrocarbons in spiked samples of soil, water and plasma by selected-ion monitoring gas chromatography-mass spectrometry . J. Chromatogr. B Biomed. Sci. Appl. , 706 : 231 – 244 .
  • Song , H. G. , Wang , X. and Bartha , R. 1990 . Bioremediation potential of terrestrial fuel spills . Applied and Environmental Microbiology , 56 : 652 – 656 .
  • Sorkhoh , N. A. , Al-Hasan , R. , Radwan , S. and Höpner , T. 1992 . Self-cleaning of the Gulf . Nature , 359 : 109
  • Sorkhoh , N. A. , Ibrahim , A. S. , Ghannoum , M. A. and Radwan , S. S. 1993 . High-temperature hydrocarbon degradation by Bacillus stearothermophilus from oil-polluted Kuwait desert . Appl. Microbiol. Biotechnol. , 39 : 123 – 126 .
  • Steiber , M. , Bockle , K. , Werner , P. and Frimmel , F. H. , eds. 1990 . Biodegradation of polycyclic hydrocarbons (PAH) in the subsurface , Dordrecht, , The Netherlands : Kluwer Academic Publisher .
  • Sun , J. D. , Wolff , R. K. and Kanapilly , G. M. 1982 . Deposition, retention, and biological fate of inhaled benzo[a]pyrene adsorbed onto ultrafine particles and as a pure aerosol . Toxicol. Appl. Pharmacol. , 65 : 231 – 244 .
  • Sutherland , J. B. , Rafii , F. , Khan , A. A. and Cerniglia , C. E. 1995 . “ Mechanisms of polycyclic aromatic hydrocarbon degradation ” . In Microbial Transformation and Degradation of Toxic Organic Chemicals , Edited by: Young , L. Y. and Cerniglia , C. E. 269 – 306 . New York : Wiley-Liss .
  • Swann , E. and Hibbett , D. S. 2003 . Basidiomycota, the club fungi. Version 18 Available at: http://tolweb.org/Basidiomycota/20520/2003.09.18, http://tolweb.org/ September 2003. From the Tree of Life Web Project
  • Thomas , J. M. , Lee , M. D. , Scott , M. J. and Ward , C. H. 1989 . Microbial ecology of the subsurface at an abandoned creosote waste site . Industrial Microbiology and Biotechnology , 4 : 109 – 120 .
  • Trenz , S. P. , Engesser , K. H. , Fischer , P. and Knackmuss , H. J. 1994 . Degradation of fluorene by Brevibacterium sp. strain DPO 1361: A novel C-C bond cleavage mechanism via 1,10-dihydro-1,10-dihydroxyfluoren-9-one . Journal of Bacteriology , 176 : 789 – 795 .
  • Venosa , A. D. , Suidan , M. T. , Wrenn , B. A. , Strohmeier , K. L. , Haines , J. R. , Eberhart , B. L. , King , D. W. and Holder , E. 1996 . Bioremediation of experimental oil spill on the shoreline of Delaware Bay . Environmental Science and Technology , 30 : 1764 – 1775 .
  • Vinas , M. , Sabate , J. , Espuny , M. J. and Solanas , A. M. 2005 . Bacterial community dynamics and polycyclic aromatic hydrocarbon degradation during bioremediation of heavily creosote-contaminated soil . Appl. Environ. Microbiol. , 71 : 7008 – 7018 .
  • Vogtmann , H. and Fricke , K. 1992 . “ Organic chemicals in compost: how relevant are they for use of it ” . In Composting and Compost Quality Assurance Criteria , Edited by: Jackson , D. V. , Merilott , J. M. and L'Hermite , P. 227 – 236 . Luxembourg : Commission of the European Communities .
  • Vyas , B. R. M. , Bakowski , S. , Sasek , V. and Matucha , M. 1994 . Degradation of anthracene by selected white rot fungi . FEMS Microbiol. Ecol. , 14 : 65 – 70 .
  • Wagrowski , D. M. and Hites , R. A. 1997 . Polycyclic aromatic hydrocarbon accumulation in urban, suburban, and rural vegetation . Environ. Sci. Technol. , 31 : 279 – 282 .
  • Walter , U. , Beyer , M. , Klein , J. and Rehm , H.-J. 1991 . Degradation of pyrene by Rhodococcus sp. UW1 . Appl. Microbiol. Biotechnol. , 34 : 671 – 676 .
  • Wang , C. and Bartha , R. 1990 . Effects of bioremediation on residues, activity and toxicity in soil contaminated by fuel spills . Soil, Biology and Biochemistry , 22 : 501 – 505 .
  • Wang , C. , Yu , X. and Bartha , R. 1990 . Effect of bioremediation on polycyclic aromatic hydrocarbon residues in soil . Environmental Science and Technology , 24 : 1086 – 1089 .
  • Warshawsky , D. 1999 . Polycyclic aromatic hydrocarbons in carcinogenesis . Environmental Health Perspectives , 107 : 317 – 319 .
  • Weissenfels , W. D. , Beyer , M. and Klein , J. 1990 . Degradation of phenanthrene, fluorene, fluoranthene by pure bacterial cultures . Appl. Microbiol. Biotechnol. , 32 : 479 – 484 .
  • Wellman , D. E. , Ulery , A. L. , Barcellona , M. P. and Duerr-Auster , S. 2001 . Animal waste-enhanced degradation of hydrocarbon-contaminated soil . Soil and Sediment Contamination , 10 : 511 – 523 .
  • Wilson , S. C. and Jones , K. C. 1993 . Bioremediation of soil contaminated with polynuclear aromatic hydrocarbons (PAHs): A review . Environ Pollut. , 81 : 229 – 249 .
  • Wong , J. W. C. , Fang , M. , Zhao , Z. and Xing , B. 2004 . Effect of surfactants on solubilization and degradation of phenanthrene under thermophilic conditions . Journal of Environmental Quality , 33 : 2015 – 2025 .
  • Wong , J. W. C. , Wan , C. K. and Fang , M. 2002 . Pig manure as a co-composting material for biodegradation of PAH-contaminated soil . Environmental Technology , 23 : 15 – 26 .
  • Yateem , A. , Balba , M. T. , AI-Awadhi , N. and EI-Nawawy , A. S. 1998 . White-rot fungi and their role in remediating oil-contaminated soil . Environ. Int. , 24 : 181 – 187 .
  • Yen , K. M. and Gunsalus , I. C. 1982 . Plasmid gene organisation: Naphthalene/ salicylate oxidation . Proc. Natl. Acad. Sci. USA , 79 : 874 – 878 .

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