Recent advances in CO₂ uptake and fixation mechanism of cyanobacteria and microalgae

References

• Alber, B. E., and Ferry, J. G. (1994). A carbonic anhydrase from the archaeon Methanosarcina thermophila. Proceedings of the National Academy of Sciences 91, 6909–6913.
   PubMed Web of Science ®Google Scholar
• Baba, M., Suzuki, I., and Shiraiwa, Y. (2011). Proteomic analysis of high-CO2-inducible extracellular proteins in the unicellular green alga. Chlamydomonas reinhardtii. Plant and Cell Physiology 52, 1302–1314.
   PubMed Web of Science ®Google Scholar
• Badger, M. R., Hanson, D., and Price, G .D. (2002). Evolution and diversity of CO2 concentrating mechanisms in cyanobacteria. Functional Plant Biology 29, 161–173.
   PubMed Web of Science ®Google Scholar
• Badger, M. R., Kaplan, A., and Berry, J. A. (1980). Internal inorganic carbon pool of Chlamydomonas reinhardtii. Evidence for a carbon dioxide-concentrating mechanism. Plant Physiology 66, 407–413.
   PubMed Web of Science ®Google Scholar
• Badger, M. R., and Price, G. D. (2003). CO2 concentrating mechanisms in cyanobacteria: molecular components, their diversity and evolution. Journal of Experimental Botany 54, 609–622.
   PubMed Web of Science ®Google Scholar
• Barbieri, M. (2015). The first three billion years code biology (pp. 75–91). Springer International Publishing AG, Switzerland.
   Google Scholar
• Bertrand, J.-C., Brochier-Armanet, C., Gouy, M., and Westall, F. (2015). For three billion years, microorganisms were the only inhabitants of the earth environmental microbiology: fundamentals and applications (pp. 75–106). Springer International Publishing AG, Switzerland.
   Google Scholar
• Betts, R. A., Jones, C. D., Knight, J. R., Keeling, R. F., and Kennedy, J. J. (2016). El Nino and a record CO2 rise. Nature Climate Change advance online publication.
   Web of Science ®Google Scholar
• Blanco-Rivero, A., Shutova, T., Roman, M. J., Villarejo, A., and Martinez, F. (2012). Phosphorylation controls the localization and activation of the lumenal carbonic anhydrase in Chlamydomonas reinhardtii. PloS One 7, e49063.
   PubMed Web of Science ®Google Scholar
• Blankenship, R. E. (2010). Early evolution of photosynthesis. Plant Physiology 154, 434–438.
   PubMed Web of Science ®Google Scholar
• Bozzo, G. G., Colman, B., and Matsuda, Y. (2000). Active transport of CO2 and bicarbonate is induced in response to external CO2 concentration in the green alga Chlorella kessleri. Journal of Experimental Botany 51, 1341–1348.
   PubMed Web of Science ®Google Scholar
• Brueggeman, A. J., Gangadharaiah, D. S., Cserhati, M. F., Casero, D., Weeks, D. P., and Ladunga, I. (2012). Activation of the carbon concentrating mechanism by CO2 deprivation coincides with massive transcriptional restructuring in Chlamydomonas reinhardtii. The Plant Cell Online 24, 1860–1875.
   PubMed Web of Science ®Google Scholar
• Buick, R. (1992). The antiquity of oxygenic photosynthesis: evidence from stromatolites in sulphate-deficient Archaean lakes. Science 255, 74–77.
   PubMed Web of Science ®Google Scholar
• Buitenhuis, E. T., De Baar, H. J. W., and Veldhuis, M. J. W. (1999). Photosynthesis and calcification by Emiliania huxleyi (Prymnesiophyceae) as a function of inorganic carbon species. Journal of Phycology 35, 949–959.
   Web of Science ®Google Scholar
• Burow, M. D., Chen, Z.-Y., Mouton, T. M., and Moroney, J. V. (1996). Isolation of cDNA clones of genes induced upon transfer of Chlamydomonas reinhardtii cells to low CO2. Plant Molecular Biology 31, 443–448.
   PubMed Web of Science ®Google Scholar
• Cameron, J. C., Wilson, S. C., Bernstein, S. L., and Kerfeld, C. A. (2013). Biogenesis of a bacterial organelle: the carboxysome assembly pathway. Cell 155, 1131–1140.
   PubMed Web of Science ®Google Scholar
• Cardol, P., Vanrobaeys, F., Devreese, B., Van Beeumen, J., Matagne, R., and Remacle, C. (2004). Higher plant-like subunit composition of mitochondrial complex I from Chlamydomonas reinhardtii: 31 conserved components among eukaryotes. Biochimica et Biophysica Acta (BBA)-Bioenergetics 1658, 212–224.
   PubMed Web of Science ®Google Scholar
• Chen, P., Andersson, D. I., and Roth, J. R. (1994). The control region of the pdu/cob regulon in Salmonella typhimurium. Journal of Bacteriology 176, 5474–5482.
   PubMed Web of Science ®Google Scholar
• Colombo, S. L., Pollock, S. V., Eger, K. A., Godfrey, A. C., Adams, J. E., Mason, C. B., and Moroney, J. V. (2002). Use of the bleomycin resistance gene to generate tagged insertional mutants of Chlamydomonas reinhardtii that require elevated CO2 for optimal growth. Functional Plant Biology 29, 231–241.
   PubMed Web of Science ®Google Scholar
• Couradeau, E., Benzerara, K., Garard, E., Estave, I., Moreira, D., Tavera, R., and Lapez-Garcaa, P. (2013). Cyanobacterial calcification in modern microbialites at the submicrometer scale. Biogeosciences 10, 5255–5266.
   Web of Science ®Google Scholar
• Drews, G., and Niklowitz, W. (1957). Cytology of blue algae. III. Studies on granular inclusions of Hormogonales. Arch Mikrobiol 25, 333–351.
   PubMedGoogle Scholar
• Duanmu, D., Miller, A. R., Horken, K. M., Weeks, D. P., and Spalding, M. H. (2009b). Knockdown of limiting-CO2-induced gene HLA3 decreases HCO3− transport and photosynthetic Ci affinity in Chlamydomonas reinhardtii. Proceedings of the National Academy of Sciences 106, 5990–5995.
   PubMed Web of Science ®Google Scholar
• Duanmu, D., Wang, Y., and Spalding, M. H. (2009a). Thylakoid lumen carbonic anhydrase (CAH3) mutation suppresses air-dier phenotype of LCIB mutant in Chlamydomonas reinhardtii. Plant Physiology 149, 929–937.
   PubMed Web of Science ®Google Scholar
• Dudoladova, M. V., Kupriyanova, E. V., Markelova, A. G., Sinetova, M. P., Allakhverdiev, S. I., and Pronina, N. A. (2007). The thylakoid carbonic anhydrase associated with photosystem II is the component of inorganic carbon accumulating system in cells of halo-and alkaliphilic cyanobacterium Rhabdoderma lineare. Biochimica et Biophysica Acta (BBA)-Bioenergetics 1767, 616–623.
   PubMed Web of Science ®Google Scholar
• Engel, B. D., Schaffer, M., Cuellar, L. K., Villa, E., Plitzko, J. M., and Baumeister, W. (2015). Native architecture of the Chlamydomonas chloroplast revealed by in situ cryo-electron tomography. eLife 4, e04889.
   PubMed Web of Science ®Google Scholar
• Eriksson, M., Karlsson, J., Ramazanov, Z., Gardestram, P., and Samuelsson, G. (1996). Discovery of an algal mitochondrial carbonic anhydrase: molecular cloning and characterization of a low-CO2-induced polypeptide in Chlamydomonas reinhardtii. Proceedings of the National Academy of Sciences 93, 12031–12034.
   PubMed Web of Science ®Google Scholar
• Falkowski, P. G., and Raven, J. A. (2013). Aquatic photosynthesis. Princeton University Press, New Jersey, USA.
   Google Scholar
• Fang, W., Si, Y., Douglass, S., Casero, D., Merchant, S. S., Pellegrini, M., Ladunga, I., Liu, P., and Spalding, M. H. (2012). Transcriptome-wide changes in Chlamydomonas reinhardtii gene expression regulated by carbon dioxide and the CO2-concentrating mechanism regulator CIA5/CCM1. The Plant Cell Online 24, 1876–1893.
   PubMed Web of Science ®Google Scholar
• Farrelly, D. J., Brennan, L., Everard, C. D., and McDonnell, K. P. (2014). Carbon dioxide utilisation of Dunaliella tertiolecta for carbon bio-mitigation in a semicontinuous photobioreactor. Applied Microbiology and Biotechnology 98, 3157–3164.
   PubMed Web of Science ®Google Scholar
• Fujiwara, S., Fukuzawa, H., Tachiki, A., and Miyachi, S. (1990). Structure and differential expression of two genes encoding carbonic anhydrase in Chlamydomonas reinhardtii. Proceedings of the National Academy of Sciences 87, 9779–9783.
   PubMed Web of Science ®Google Scholar
• Fukuzawa, H., Fujiwara, S., Yamamoto, Y., Dionisio-Sese, M. L., and Miyachi, S. (1990). cDNA cloning, sequence, and expression of carbonic anhydrase in Chlamydomonas reinhardtii: Regulation by environmental CO2 concentration. Proceedings of the National Academy of Sciences 87, 4383–4387.
   PubMed Web of Science ®Google Scholar
• Fukuzawa, H., Suzuki, E., Komukai, Y., and Miyachi, S. (1992). A gene homologous to chloroplast carbonic anhydrase (icfA) is essential to photosynthetic carbon dioxide fixation by Synechococcus PCC7942. Proceedings of the National Academy of Sciences 89, 4437–4441.
   PubMed Web of Science ®Google Scholar
• Galmes, J., Andralojc, P. J., Kapralov, M. V., Flexas, J., Keys, A. J., Molins, A., Parry, M. A. J., and Conesa, M.Ã. (2014). Environmentally driven evolution of RuBisCO and improved photosynthesis and growth within the C3 genus Limonium (Plumbaginaceae). New Phytologist 203, 989–999.
   PubMed Web of Science ®Google Scholar
• Gao, H., Wang, Y., Fei, X., Wright, D. A., and Spalding, M. H. (2015). Expression activation and functional analysis of HLA3, a putative inorganic carbon transporter in Chlamydomonas reinhardtii. The Plant Journal 82, 1–11.
   PubMed Web of Science ®Google Scholar
• Giordano, M., Norici, A., Forssen, M., Eriksson, M., and Raven, J. A. (2003). An anaplerotic role for mitochondrial carbonic anhydrase in Chlamydomonas reinhardtii. Plant Physiology 132, 2126–2134.
   PubMed Web of Science ®Google Scholar
• Hanson, D. T., Franklin, L. A., Samuelsson, G., and Badger, M. R. (2003). The Chlamydomonas reinhardtii cia3 mutant lacking a thylakoid lumen-localized carbonic anhydrase is limited by CO2 supply to RuBisCO and not photosystem II function in vivo. Plant Physiology 132, 2267–2275.
   PubMed Web of Science ®Google Scholar
• Heinhorst, S., Cannon, G. C., and Shively, J. M. (2014). Carboxysomes and their structural organization in prokaryotes nanomicrobiology (pp. 75–101). Springer International Publishing AG, Switzerland.
   Google Scholar
• Higgins, C. F. (2001). ABC transporters: physiology, structure and mechanism: an overview. Research in Microbiology 152, 205–210.
   PubMed Web of Science ®Google Scholar
• Hohmann-Marriott, M. F., and Blankenship, R. E. (2011). Evolution of photosynthesis. Annual Review of Plant Biology 62, 515–548.
   PubMed Web of Science ®Google Scholar
• IEA. (2008). World Energy Outlook 2008.
   Google Scholar
• Im, C. S., and Grossman, A. R. (2002). Identification and regulation of high light-induced genes in Chlamydomonas reinhardtii. The Plant Journal 30, 301–313.
   PubMed Web of Science ®Google Scholar
• Jacob-Lopes, E., Scoparo, C. H. G., Lacerda, L.M.C.F., and Franco, T. T. (2009). Effect of light cycles (night/day) on CO2 fixation and biomass production by microalgae in photobioreactors. Chemical Engineering and Processing: Process Intensification 48, 306–310.
   Web of Science ®Google Scholar
• Jiang, H.-B., Cheng, H.-M., Gao, K.-S., and Qiu, B.-S. (2013). Inactivation of Ca2+/H+ exchanger in Synechocystis sp. Strain PCC 6803 promotes cyanobacterial calcification by upregulating CO2 concentrating mechanisms. Applied and Environmental Microbiology 79, 4048–4055.
   PubMed Web of Science ®Google Scholar
• Jiang, H.-B., Song, W.-Y., Cheng, H.-M., and Qiu, B.-S. (2015). The hypothetical protein Ycf46 is involved in regulation of CO2 utilization in the cyanobacterium Synechocystis sp. PCC 6803. Planta 241, 145–155.
   PubMed Web of Science ®Google Scholar
• Kaplan, A., and Reinhold, L. (1999). CO2 concentrating mechanisms in photosynthetic microorganisms. Annual Review of Plant Biology 50, 539–570.
   PubMed Web of Science ®Google Scholar
• Karlsson, J., Clarke, A. K., Chen, Z. Y., Hugghins, S. Y., Park, Y. I., Husic, H. D., Moroney, J. V., and Samuelsson, G. (1998). A novel α-type carbonic anhydrase associated with the thylakoid membrane in Chlamydomonas reinhardtii is required for growth at ambient CO2. The EMBO Journal 17, 1208–1216.
   PubMed Web of Science ®Google Scholar
• Kimpel, D. L., Togasaki, R. K., and Miyachi, S. (1983). Carbonic anhydrase in Chlamydomonas reinhardtii I. Localization. Plant and Cell Physiology 24, 255–259.
   Web of Science ®Google Scholar
• Kupriyanova, E., Villarejo, A., Markelova, A., Gerasimenko, L., Zavarzin, G., Samuelsson, G., Los, D. A., and Pronina, N. (2007). Extracellular carbonic anhydrases of the stromatolite-forming cyanobacterium Microcoleus chthonoplastes. Microbiology 153, 1149–1156.
   PubMed Web of Science ®Google Scholar
• Kupriyanova, E. V., Cho, S. M., Park, Y.-I., Pronina, N. A., and Los, D. A. (2016). The complete genome of a cyanobacterium from a soda lake reveals the presence of the components of CO2-concentrating mechanism. Photosynthesis Research, 1–15 (doi:10.1007/s11120-016-0235-0).
   Web of Science ®Google Scholar
• Kupriyanova, E. V., Sinetova, M. A., Cho, S. M., Park, Y.-I., Los, D. A., and Pronina, N. A. (2013). CO2-concentrating mechanism in cyanobacterial photosynthesis: organization, physiological role, and evolutionary origin. Photosynthesis Research 117, 133–146.
   PubMed Web of Science ®Google Scholar
• Kupriyanova, E. V., Sinetova, M. A., Markelova, A. G., Allakhverdiev, S. I., Los, D. A. and Pronina, N. A. (2011). Extracellular β-class carbonic anhydrase of the alkaliphilic cyanobacterium Microcoleus chthonoplastes. Journal of Photochemistry and Photobiology B: Biology, 103, 78–86.
   Google Scholar
• Kustu, S., and Inwood, W. (2006). Biological gas channels for NH3 and CO2 : evidence that Rh (Rhesus) proteins are CO2 channels. Transfusion Clinique et Biologique 13, 103–110.
   PubMed Web of Science ®Google Scholar
• Ma, W., and Ogawa, T. (2015). Oxygenic photosynthesis-specific subunits of cyanobacterial NADPH dehydrogenases. IUBMB Life 67, 3–8.
   PubMed Web of Science ®Google Scholar
• Maeda, S., Badger, M. R., and Price, G. D. (2002). Novel gene products associated with NdhD3/D4-containing NDH-1 complexes are involved in photosynthetic CO2 hydration in the cyanobacterium, Synechococcus sp. PCC7942. Molecular Microbiology 43, 425–435.
   PubMed Web of Science ®Google Scholar
• Mangan, N. M., and Brenner, M. P. (2014). Systems analysis of the CO2 concentrating mechanism in cyanobacteria. eLife 3, e02043.
   PubMed Web of Science ®Google Scholar
• Merchant, S. S., Prochnik, S. E., Vallon, O., Harris, E. H., Karpowicz, S. J., Witman, G. B., Terry, A., Salamov, A., Fritz-Laylin, L. K., and Marchal-Drouard, L. (2007). The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science 318, 245–250.
   PubMed Web of Science ®Google Scholar
• Meyer, M., and Griffiths, H. (2013). Origins and diversity of eukaryotic CO2-concentrating mechanisms: lessons for the future. Journal of Experimental Botany 64, 769–786.
   PubMed Web of Science ®Google Scholar
• Mikhodyuk, O. S., Zavarzin, G. A., and Ivanovsky, R. N. (2008). Transport systems for carbonate in the extremely natronophilic cyanobacterium Euhalothece sp. Microbiology 77, 412–418.
   Web of Science ®Google Scholar
• Mitchell, M. C., Meyer, M. T., and Griffiths, H. (2014). Dynamics of carbon-concentrating mechanism induction and protein Relocalization during the dark-to-light transition in Synchronized Chlamydomonas reinhardtii. Plant Physiology 166, 1073–1082.
   PubMed Web of Science ®Google Scholar
• Mitra, M., Lato, S. M., Ynalvez, R. A., Xiao, Y., and Moroney, J. V. (2004). Identification of a new chloroplast carbonic anhydrase in Chlamydomonas reinhardtii. Plant Physiology 135, 173–182.
   PubMed Web of Science ®Google Scholar
• Miura, K., Yamano, T., Yoshioka, S., Kohinata, T., Inoue, Y., Taniguchi, F., Asamizu, E., Nakamura, Y., Tabata, S., and Yamato, K. T. (2004). Expression profiling-based identification of CO2-responsive genes regulated by CCM1 controlling a carbon-concentrating mechanism in Chlamydomonas reinhardtii. Plant Physiology 135, 1595–1607.
   PubMed Web of Science ®Google Scholar
• Moroney, J. V., Husic, H. D., and Tolbert, N. E. (1985). Effect of carbonic anhydrase inhibitors on inorganic carbon accumulation by Chlamydomonas reinhardtii. Plant Physiology 79, 177–183.
   PubMed Web of Science ®Google Scholar
• Moroney, J. V., Ma, Y., Frey, W. D., Fusilier, K. A., Pham, T. T., Simms, T. A., DiMario, R. J., Yang, J., and Mukherjee, B. (2011). The carbonic anhydrase isoforms of Chlamydomonas reinhardtii: intracellular location, expression, and physiological roles. Photosynthesis Research 109, 133–149.
   PubMed Web of Science ®Google Scholar
• Moroney, J. V., and Ynalvez, R. A. (2007). Proposed carbon dioxide concentrating mechanism in Chlamydomonas reinhardtii. Eukaryotic Cell 6, 1251–1259.
   PubMed Web of Science ®Google Scholar
• Nordhaus, W. D. (1991). Economic approaches to greenhouse warming. MIT Press, Cambridge MA, USA, 33–36.
   Google Scholar
• Ohnishi, N., Mukherjee, B., Tsujikawa, T., Yanase, M., Nakano, H., Moroney, J. V., and Fukuzawa, H. (2010). Expression of a Low CO2-inducible protein, LCI1, increases inorganic carbon uptake in the green alga Chlamydomonas reinhardtii. The Plant Cell Online 22, 3105–3117.
   PubMed Web of Science ®Google Scholar
• Omata, T., Gohta, S., Takahashi, Y., Harano, Y., and Maeda, S.-I. (2001). Involvement of a CbbR homolog in low CO2-induced activation of the bicarbonate transporter operon in cyanobacteria. Journal of Bacteriology 183, 1891–1898.
   PubMed Web of Science ®Google Scholar
• Omata, T., Price, G. D., Badger, M. R., Okamura, M., Gohta, S., and Ogawa, T. (1999). Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942. Proceedings of the National Academy of Sciences 96, 13571–13576.
   PubMed Web of Science ®Google Scholar
• Palenik, B., Grimwood, J., Aerts, A., Rouzo, P., Salamov, A., Putnam, N., Dupont, C., Jorgensen, R., Derelle, E., and Rombauts, S. (2007). The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Proceedings of the National Academy of Sciences 104, 7705–7710.
   PubMed Web of Science ®Google Scholar
• Park, Y.-I., Karlsson, J., Rojdestvenski, I., Pronina, N., Klimov, V., Aquist, G., and Samuelsson, G. (1999). Role of a novel photosystem II-associated carbonic anhydrase in photosynthetic carbon assimilation in Chlamydomonas reinhardtii. FEBS Letters 444, 102–105.
   PubMed Web of Science ®Google Scholar
• Peers, G., and Niyogi, K. K. (2008). Pond scum genomics: The genomes of Chlamydomonas and Ostreococcus. The Plant Cell Online 20, 502–507.
   PubMed Web of Science ®Google Scholar
• Price, G. D. (2011). Inorganic carbon transporters of the cyanobacterial CO2 concentrating mechanism. Photosynthesis Research 109, 47–57.
   PubMed Web of Science ®Google Scholar
• Price, G. D., Badger, M. R., Woodger, F. J., and Long, B. M. (2008). Advances in understanding the cyanobacterial CO2−concentrating-mechanism (CCM): functional components, Ci transporters, diversity, genetic regulation and prospects for engineering into plants. Journal of Experimental Botany 59, 1441–1461.
   PubMed Web of Science ®Google Scholar
• Price, G. D., Pengelly, J. J. L., Forster, B., Du, J., Whitney, S. M., von Caemmerer, S., Badger, M. R., Howitt, S. M., and Evans, J. R. (2013). The cyanobacterial CCM as a source of genes for improving photosynthetic CO2 fixation in crop species. Journal of Experimental Botany 64, 753–768.
   PubMed Web of Science ®Google Scholar
• Price, G. D., Woodger, F. J., Badger, M. R., Howitt, S. M., and Tucker, L. (2004). Identification of a SulP-type bicarbonate transporter in marine cyanobacteria. Proceedings of the National Academy of Sciences 101, 18228–18233.
   PubMed Web of Science ®Google Scholar
• Pulz, O., and Gross, W. (2004). Valuable products from biotechnology of microalgae. Applied Microbiology and Biotechnology 65, 635–648.
   PubMed Web of Science ®Google Scholar
• Qiu, H., Yoon, H. S., and Bhattacharya, D. (2013). Algal endosymbionts as vectors of horizontal gene transfer in photosynthetic eukaryotes. Frontiers in Plant Science 4.
   PubMed Web of Science ®Google Scholar
• Rae, B. D., Long, B. M., Whitehead, L. F., Forster, B., Badger, M. R., and Price, G. D. (2013). Cyanobacterial carboxysomes: microcompartments that facilitate CO2 fixation. Journal of Molecular Microbiology and Biotechnology 23, 300–307.
   PubMed Web of Science ®Google Scholar
• Raven, J. A. (1997). CO2 concentrating mechanisms: a direct role for thylakoid lumen acidification? Plant, Cell & Environment 20, 147–154.
   Web of Science ®Google Scholar
• Raven, J. A., Beardall, J., and Giordano, M. (2014). Energy costs of carbon dioxide concentrating mechanisms in aquatic organisms. Photosynthesis Research 121, 111–124.
   PubMed Web of Science ®Google Scholar
• Raven, J. A., Johnston, A. M., Kaœbler, J. E., Korb, R., McInroy, S. G., Handley, L. L., Scrimgeour, C. M., Walker, D. I., Beardall, J., and Clayton, M. N. (2002). Seaweeds in cold seas: evolution and carbon acquisition. Annals of Botany 90, 525–536.
   PubMed Web of Science ®Google Scholar
• Rawat, M., and Moroney, J. V. (1995). The regulation of carbonic anhydrase and ribulose-1, 5-bisphosphate carboxylase/oxygenase activase by light and CO2 in Chlamydomonas reinhardtii. Plant Physiology 109, 937–944.
   PubMed Web of Science ®Google Scholar
• Riding, R. (2006). Cyanobacterial calcification, carbon dioxide concentrating mechanisms, and Proterozoic Cambrian changes in atmospheric composition. Geobiology 4, 299–316.
   Web of Science ®Google Scholar
• Rocap, G., Distel, D. L., Waterbury, J. B., and Chisholm, S. W. (2002). Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences. Applied and Environmental Microbiology 68, 1180–1191.
   PubMed Web of Science ®Google Scholar
• Rolland, N., Dorne, A. J., Amoroso, G., Saltemeyer, D. F., Joyard, J., and Rochaix, J. D. (1997). Disruption of the plastid ycf10 open reading frame affects uptake of inorganic carbon in the chloroplast of Chlamydomonas. The EMBO Journal 16, 6713–6726.
   PubMed Web of Science ®Google Scholar
• Sandrini, G., Matthijs, H. C. P., Verspagen, J. M. H., Muyzer, G., and Huisman, J. (2014). Genetic diversity of inorganic carbon uptake systems causes variation in CO2 response of the cyanobacterium Microcystis. The ISME Journal 8, 589–600.
   PubMed Web of Science ®Google Scholar
• Sawaya, M. R., Cannon, G. C., Heinhorst, S., Tanaka, S., Williams, E. B., Yeates, T. O., and Kerfeld, C. A. (2006). The structure of β-carbonic anhydrase from the carboxysomal shell reveals a distinct subclass with one active site for the price of two. Journal of Biological Chemistry 281, 7546–7555.
   PubMed Web of Science ®Google Scholar
• Seckbach, J., and Oren, A. (2007). Oxygenic photosynthetic microorganisms in extreme environments algae and cyanobacteria in extreme environments (pp. 3–25). Springer International Publishing AG, Switzerland.
   Google Scholar
• Seckbach, J., Oren, A., and Stan-Lotter, H. (2013). Polyextremophiles: life under multiple forms of stress. Springer International Publishing AG, Switzerland.
   Google Scholar
• Shibata, M., Ohkawa, H., Kaneko, T., Fukuzawa, H., Tabata, S., Kaplan, A., and Ogawa, T. (2001). Distinct constitutive and low-CO2-induced CO2 uptake systems in cyanobacteria: genes involved and their phylogenetic relationship with homologous genes in other organisms. Proceedings of the National Academy of Sciences 98, 11789–11794.
   PubMed Web of Science ®Google Scholar
• Shively, J. M., Ball, F., Brown, D. H., and Saunders, R. E. (1973). Functional organelles in prokaryotes: polyhedral inclusions (carboxysomes) of Thiobacillus neapolitanus. Science 182, 584–586.
   PubMed Web of Science ®Google Scholar
• Singh, S. K., Bansal, A., Jha, M. K., and Dey, A. (2011). Comparative studies on uptake of wastewater nutrients by immobilized cells of chlorella minutissima and dairy waste isolated algae. Indian Chemical Engineer 53, 211–219.
   Google Scholar
• Singh, S. K., Bansal, A., Jha, M. K., and Dey, A. (2012). An integrated approach to remove Cr (VI) using immobilized Chlorella minutissima grown in nutrient rich sewage wastewater. Bioresource Technology 104, 257–265.
   PubMed Web of Science ®Google Scholar
• Singh, S. K., Rahman, A., Dixit, K., Nath, A., and Sundaram, S. (2016). Evaluation of promising algal strains for sustainable exploitation coupled with CO2 fixation. Environmental Technology 37, 613–622.
   PubMed Web of Science ®Google Scholar
• Singh, S. K., Sundaram, S., and Kishor, K. (2014). Photosynthetic microorganism-based CO₂ mitigation system: integrated approaches for global sustainability photosynthetic microorganisms (pp. 83–123). Springer International Publishing AG, Switzerland.
   Google Scholar
• Skjanes, K., Lindblad, P., and Muller, J. (2007). Bio-CO2: a multidisciplinary, biological approach using solar energy to capture CO2 while producing H2 and high value products. Biomolecular Engineering 24, 405–413.
   PubMedGoogle Scholar
• So, A. K. C., Van Spall, H. G. C., Coleman, J. R., and Espie, G. S. (1998). Catalytic exchange of 18O from 13C18O-labelled CO2 by wild-type cells and ecaA, ecaB, and ccaA mutants of the cyanobacteria Synechococcus PCC7942 and Synechocystis PCC6803. Canadian Journal of Botany 76, 1153–1160.
   Google Scholar
• Soltes-Rak, E., Mulligan, M. E., and Coleman, J. R. (1997). Identification and characterization of a gene encoding a vertebrate-type carbonic anhydrase in cyanobacteria. Journal of Bacteriology 179, 769–774.
   PubMed Web of Science ®Google Scholar
• Soupene, E., Inwood, W., and Kustu, S. (2004). Lack of the Rhesus protein Rh1 impairs growth of the green alga Chlamydomonas reinhardtii at high CO2. Proceedings of the National Academy of Sciences of the United States of America 101, 7787–7792.
   PubMed Web of Science ®Google Scholar
• Spalding, M. H. (2008). Microalgal carbon-dioxide-concentrating mechanisms: Chlamydomonas inorganic carbon transporters. Journal of Experimental Botany 59, 1463–1473.
   PubMed Web of Science ®Google Scholar
• Tabita, F. R., Satagopan, S., Hanson, T. E., Kreel, N. E., and Scott, S. S. (2008). Distinct form I, II, III, and IV RuBisCO proteins from the three kingdoms of life provide clues about RuBisCO evolution and structure/function relationships. Journal of Experimental Botany 59, 1515–1524.
   PubMed Web of Science ®Google Scholar
• Tirumani, S., Kokkanti, M., Chaudhari, V., Shukla, M., and Rao, B. J. (2014). Regulation of CCM genes in Chlamydomonas reinhardtii during conditions of light-dark cycles in synchronous cultures. Plant Molecular Biology 85, 277–286.
   PubMed Web of Science ®Google Scholar
• Van, K., and Spalding, M. H. (1999). Periplasmic carbonic anhydrase structural gene (Cah1) mutant in Chlamydomonas reinhardtii. Plant Physiology 120, 757–764.
   PubMed Web of Science ®Google Scholar
• Villand, P., Eriksson, M., and Samuelsson, G. (1997). Carbon dioxide and light regulation of promoters controlling the expression of mitochondrial carbonic anhydrase in Chlamydomonas reinhardtii. Biochemical Journal 327, 51–57.
   PubMed Web of Science ®Google Scholar
• Wang, X., Piao, S., Ciais, P., Friedlingstein, P., Myneni, R. B., Cox, P., Heimann, M., Miller, J., Peng, S., and Wang, T. (2014). A two-fold increase of carbon cycle sensitivity to tropical temperature variations. Nature 506, 212–215.
   PubMed Web of Science ®Google Scholar
• Wang, Y., and Spalding, M. H. (2006). An inorganic carbon transport system responsible for acclimation specific to air levels of CO2 in Chlamydomonas reinhardtii. Proceedings of the National Academy of Sciences 103, 10110–10115.
   PubMed Web of Science ®Google Scholar
• Whitehead, L., Long, B. M., Price, G. D., and Badger, M. R. (2014). Comparing the in vivo function of α-carboxysomes and β-carboxysomes in two model cyanobacteria. Plant Physiology 165, 398–411.
   PubMed Web of Science ®Google Scholar
• Wu, X., Wu, Z., and Song, L. (2011). Phenotype and temperature affect the affinity for dissolved inorganic carbon in a cyanobacterium Microcystis. Hydrobiologia 675, 175–186.
   Web of Science ®Google Scholar
• Xu, M., Bernat, G., Singh, A., Mi, H., Ragner, M., Pakrasi, H. B., and Ogawa, T. (2008). Properties of mutants of Synechocystis sp. strain PCC 6803 lacking inorganic carbon sequestration systems. Plant and Cell Physiology 49, 1672–1677.
   PubMed Web of Science ®Google Scholar
• Yamano, T., Asada, A., Sato, E., and Fukuzawa, H. (2014). Isolation and characterization of mutants defective in the localization of LCIB, an essential factor for the carbon-concentrating mechanism in Chlamydomonas reinhardtii. Photosynthesis Research 121, 193–200.
   PubMed Web of Science ®Google Scholar
• Yamano, T., and Fukuzawa, H. (2009). Carbon concentrating mechanism in a green alga, Chlamydomonas reinhardtii, revealed by transcriptome analyses. Journal of Basic Microbiology 49, 42–51.
   PubMed Web of Science ®Google Scholar
• Yamano, T., Tsujikawa, T., Hatano, K., Ozawa, S.-I., Takahashi, Y., and Fukuzawa, H. (2010). Light and low-CO2-dependent LCIB-LCIC complex localization in the chloroplast supports the carbon-concentrating mechanism in Chlamydomonas reinhardtii. Plant and Cell Physiology 51, 1453–1468.
   PubMed Web of Science ®Google Scholar
• Ynalvez, R. A., Xiao, Y., Ward, A. S., Cunnusamy, K., and Moroney, J. V. (2008). Identification and characterization of two closely related beta-carbonic anhydrases from Chlamydomonas reinhardtii. Physiologia Plantarum 133, 15–26.
   PubMed Web of Science ®Google Scholar
• Yoo, C., Jun, S.-Y., Lee, J.-Y., Ahn, C.-Y., and Oh, H.-M. (2010). Selection of microalgae for lipid production under high levels carbon dioxide. Bioresource Technology 101, S71–S74.
   PubMed Web of Science ®Google Scholar
• Yu, J.-W., Price, G. D., Song, L., and Badger, M. R. (1992). Isolation of a putative carboxysomal carbonic anhydrase gene from the cyanobacterium Synechococcus PCC7942. Plant Physiology 100, 794–800.
   PubMed Web of Science ®Google Scholar