Consolidated bioprocessing for cellulosic ethanol conversion by cellulase–xylanase cell-surfaced yeast consortium

References

• Lynd, L.; Zyl, W.; Mcbride, J.; Laser, M. Consolidated Bioprocessing of Cellulosic Biomass: An Update. Curr. Opin. Biotechnol. 2005, 16, 577–583.
   PubMed Web of Science ®Google Scholar
• Zafra, G.; Cortés-Espinosa, D.V. Biodegradation of Polycyclic Aromatic Hydrocarbons by Trichoderma Species: A Mini Review. Environ. Sci. Pollut. Res. 2015, 22, 19426–19433.
   PubMed Web of Science ®Google Scholar
• Druzhinina, I.S.; Kubicek, C.P. Familiar Stranger: Ecological Genomics of the Model Saprotroph and Industrial Enzyme Producer Trichoderma reesei Breaks the Stereotypes. Adv. Appl. Microbiol. 2016, 95, 69–147.
   PubMed Web of Science ®Google Scholar
• Juhasz, T.; Szengyel, Z.; Reczey, K.; Siika-Aho, M.; Viikari, L. Characterization of Cellulases and Hemicellulases Produced by Trichoderma Reesei on Various Carbon Sources. Process Biochem. 2005, 40, 3519–3525.
   Web of Science ®Google Scholar
• Sakamoto, T.; Hasunuma, T.; Hori, Y.; Yamada, R.; Kondo, A. Direct Ethanol Production from Hemicellulosic Materials of Rice Straw by Use of an Engineered Yeast Strain Codisplaying Three Types of Hemicellulolytic Enzymes on the Surface of Xylose-Utilizing Saccharomyces cerevisiae Cells. J. Biotechnol. 2012, 158, 203–210.
   PubMed Web of Science ®Google Scholar
• Mert, M.J.; la Grange, D.C.; Rose, S.H.; van Zyl, W.H. Engineering of Saccharomyces cerevisiae to Utilize Xylan as a Sole Carbohydrate Source by Co-Expression of an Endoxylanase, Xylosidase and a Bacterial Xylose Isomerase. J. Indus. Microbiol. Biotechnol. 2016, 43, 431–440.
   PubMed Web of Science ®Google Scholar
• Prior, B.A.; Day, D.F. Hydrolysis of Ammonia-Pretreated Sugar Cane Bagasse with Cellulase, Beta-Glucosidase, and Hemicellulase Preparations. Appl. Biochem. Biotechnol. 2008, 146, 151–164.
   PubMed Web of Science ®Google Scholar
• Ren, H.; Richard, T.L.; Moore, K.J. The Impact of Enzyme Characteristics on Corn Stover Fiber Degradation and Acid Production During Ensiled Storage. Appl. Biochem. Biotechnol. 2007, 137–140, 221–238.
   PubMed Web of Science ®Google Scholar
• Moraïs, S.; Barak, Y.; Caspi, J.; Hadar, Y.; Lamed, R.; Shoham, Y.; Wilson, D.B.; Bayer, E.A. Cellulase-Xylanase Synergy in Designer Cellulosomes for Enhanced Degradation of a Complex Cellulosic Substrate. MBio. 2010, 1, e00285-10–e00210.
   PubMed Web of Science ®Google Scholar
• Bae, J.; Kuroda, K.; Ueda, M. Proximity Effect among Cellulose-Degrading Enzymes Displayed on the Saccharomyces cerevisiae Cell Surface. Appl. Environ. Microbiol. 2015, 81, 59–66.
   PubMed Web of Science ®Google Scholar
• Song, H.T.; Gao, Y.; Yang, Y.M.; Xiao, W.J.; Liu, S.H.; Xia, W.C.; Liu, Z.L.; Yi, L.; Jiang, Z.B. Synergistic Effect of Cellulase and Xylanase during Hydrolysis of Natural Lignocellulosic Substrates. Bioresour. Technol. 2016, 219, 710–715.
   PubMed Web of Science ®Google Scholar
• Gonçalves, G.A.; Takasugi, Y.; Jia, L.; Mori, Y.; Noda, S.; Tanaka, T.; Ichinose, H.; Kamiya, N. Synergistic Effect and Application of Xylanases as Accessory Enzymes to Enhance the Hydrolysis of Pretreated Bagasse. Enzyme Microb. Technol. 2015, 72, 16–24.
   PubMed Web of Science ®Google Scholar
• Zhang, J.; Viikari, L. Impact of Xylan on Synergistic Effects of Xylanases and Cellulases in Enzymatic Hydrolysis of Lignocelluloses. Appl. Biochem. Biotechnol. 2014, 174, 1393–1402.
   PubMed Web of Science ®Google Scholar
• Hu, J.; Arantes, V.; Saddler, J.N. The Enhancement of Enzymatic Hydrolysis of Lignocellulosic Substrates by the Addition of Accessory Enzymes Such as Xylanase: Is It an Additive or Synergistic Effect? Biotechnol. Biofuels 2011, 4, 36.
   PubMed Web of Science ®Google Scholar
• Liu, Z.; Ho, S.H.; Hasunuma, T.; Chang, J.S.; Ren, N.Q.; Kondo, A. Recent Advances in Yeast Cell-Surface Display Technologies for Waste Biorefineries. Bioresour. Technol. 2016, 215, 324–333.
   PubMed Web of Science ®Google Scholar
• Tian, S.; Luo, X.L.; Yang, X.S.; Zhu, J.Y. Robust Cellulosic Ethanol Production from SPORL-Pretreated Lodgepole Pine Using an Adapted Strain Saccharomyces cerevisiae without Detoxification. Bioresour. Technol. 2010, 101, 8678–8685.
   PubMed Web of Science ®Google Scholar
• Lambertz, C.; Garvey, M.; Klinger, J.; Heesel, D.; Klose, H.; Fischer, R.; Commandeur, U. Challenges and Advances in the Heterologous Expression of Cellulolytic Enzymes: A Review. Biotechnol. Biofuels. 2014, 7, 135.
   PubMed Web of Science ®Google Scholar
• Amoah, J.; Ishizue, N.; Ishizaki, M.; Yasuda, M.; Takahashi, K.; Ninomiya, K.; Yamada, R.; Kondo, A.; Ogino, C. Development and Evaluation of Consolidated Bioprocessing Yeast for Ethanol Production from Ionic Liquid-Pretreated Bagasse. Bioresour. Technol. 2017, 245, 1413–1420.
   PubMed Web of Science ®Google Scholar
• Apiwatanapiwat, W.; Murata, Y.; Kosugi, A.; Yamada, R.; Kondo, A.; Arai, T.; Rugthaworn, P.; Mori, Y. Direct Ethanol Production from Cassava Pulp Using a Surface-Engineered Yeast Strain Co-Displaying Two Amylases, Two Cellulases, and β-Glucosidase. Appl. Microbiol. Biotechnol. 2011, 90, 377–384.
   PubMed Web of Science ®Google Scholar
• Jin, Y.; Wang, Z.; Mo, C.L.; Yang, X.S; Tian, S. Construction of Recombinant Saccharomyces cerevisiae Strains through Expressing the Key Genes in the Xylose Metabolism under the Control of Different Promoters for Co-Fermentation Glucose and Xylose. Biotechnol. Bull. 2014, 0, 153–160.
   Google Scholar
• Fan, L.H.; Zhang, Z.J.; Yu, X.Y.; Xue, Y.X.; Tan, T.W. Self-Surface Assembly of Cellulosomes with Two Miniscaffoldins on Saccharomyces cerevisiae for Cellulosic Ethanol Production. Proc. Natl. Acad. Sci. USA. 2012, 109, 13260–13265.
   PubMed Web of Science ®Google Scholar
• Tsai, S.L.; Goyal, G.; Chen, W. Surface Display of a Functional Minicellulosome by Intracellular. Appl. Environ. Microbiol. 2010, 76, 7514–7520.
   PubMed Web of Science ®Google Scholar
• Wood, T.M.; Bhat, K.M. Methods for Measuring Cellulase Activities. Methods Enzymol. 1988, 160, 87–112.
   Web of Science ®Google Scholar
• Mo, C.L.; Chen, N.; Lv, T.; Du, J.L.; Tian, S. Direct Ethanol Production from Steam-Exploded Corn Stover Using a Synthetic Diploid Cellulase-Displaying Yeast Consortium. Bioresources. 2015, 10, 4460–4472.
   Web of Science ®Google Scholar
• Fujita, Y.; Ito, J.; Ueda, M.; Fukuda, H.; Kondo, A. Synergistic Saccharification, and Direct Fermentation to Ethanol, of Amorphous Cellulose by Use of an Engineered Yeast Strain Codisplaying Three Types of Cellulolytic Enzyme. Appl. Environ. Microbiol. 2004, 70, 1207–1212.
   PubMed Web of Science ®Google Scholar
• Liu, Z.; Inokuma, K.; Ho, S.H.; Haan, R.D.; Hasunuma, T.; van Zyl, W.H.; Kondo, A. Combined Cell-Surface Displayand Secretion-Based Strategies for Production of Cellulosic Ethanol with Saccharomyces cerevisiae. Biotechnol. Biofuels. 2015, 8, 162.
   PubMed Web of Science ®Google Scholar
• Ostergaard, S.; Olsson, L.; Nielsen, J. Metabolic Engineering of Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 2000, 64, 34–50.
   PubMed Web of Science ®Google Scholar
• Tang, X.S.; Zhang, X.W. Saccharomyces cerevisiae Expression System. Life Sci. Res. 2004, 8, 106–109.
   Google Scholar
• Bill, R.M. Recombinant Protein Production in Yeast: Methods and Protocols. Humana Press: New Jersey, USA, 2005; p 245–259.
   Google Scholar
• Xu, L.; Shen, Y.; Hou, J.; Peng, B.; Tang, H.; Bao, X. Secretory Pathway Engineering Enhances Secretion of Cellobiohydrolase I from Trichoderma Reesei in Saccharomyces cerevisiae. J. Biosci. Bioeng. 2014, 117, 45–52.
   PubMed Web of Science ®Google Scholar
• Wang, T.Y.; Huang, C.J.; Chen, H.L.; Ho, P.C.; Ke, H.M.; Cho, H.Y.; Ruan, S.K.; Hung, K.Y.; Wang, I.L.; Cai, Y.W.; et al. Systematic Screening of Glycosylation- and Trafficking-Associated Gene Knockouts in Saccharomyces cerevisiae Identifies Mutants with Improved Heterologous Exocellulase Activity and Host Secretion. BMC Biotechnol. 2013, 13, 71.
   PubMed Web of Science ®Google Scholar
• Suzuki, H.; Imaeda, T.; Kitagawa, T.; Kohda, K. Deglycosylation of Cellulosomal Enzyme Enhances Cellulosome Assembly in Saccharomyces cerevisiae. J. Biotechnol. 2012, 157, 64–70.
   PubMed Web of Science ®Google Scholar
• Ho, N.W.; Chen, Z.; Brainard, A.P. Genetically Engineered Saccharomyces Yeast Capable of Effective Cofermentation of Glucose and Xylose. Appl. Environ. Microbiol. 1998, 64, 1852–1859.
   PubMed Web of Science ®Google Scholar
• Hahn-Ha¨Gerdal, B.; Karhumaa, K.; Jeppsson, M.; Gorwa-Grauslund, M.F. Metabolic Engineering for Pentose Utilization in Saccharomyces cerevisiae. Adv. Biochem. Eng. Biotechnol. 2007, 108, 147–177.
   PubMed Web of Science ®Google Scholar
• Matsushika, A.; Inoue, H.; Kodaki, T.; Sawayama, S. Ethanol Production from Xylose in Engineered Saccharomyces cerevisiae Strains: Current State and Perspectives. Appl. Microbiol. Biotechnol. 2009, 84, 37–53.
   PubMed Web of Science ®Google Scholar
• Van Vleet, J.H.; Jeffries, T.W. Yeast Metabolic Engineering for Hemicellulosic Ethanol Production. Curr. Opin. Biotechnol. 2009, 20, 300–306.
   PubMed Web of Science ®Google Scholar
• Inokuma, K.; Hasunuma, T.; Kondo, A. Efficient Yeast Cell-Surface Display of Exo- and Endo-Cellulase Using the SED1 Anchoring Region and Its Original Promoter. Biotechnol. Biofuels. 2014, 7, 8.
   PubMed Web of Science ®Google Scholar
• Yamada, R.; Taniguchi, N.; Tanaka, T.; Ogino, C.; Fukuda, H.; Kondo, A. Direct Ethanol Production from Cellulosic Materials Using a Diploid Strain of Saccharomyces cerevisiae with Optimized Cellulase Expression. Biotechnol. Biofuels. 2011, 4, 8.
   PubMed Web of Science ®Google Scholar
• Katahira, S.; Fujita, Y.; Mizuike, A.; Fukuda, H.; Kondo, A. Construction of a Xylan-Fermenting Yeast Strain through Codisplay of Xylanolytic Enzymes on the Surface of Xylose-Utilizing Saccharomyces cerevisiae Cells. Appl. Environ. Microbiol. 2004, 70, 5407–5414.
   PubMed Web of Science ®Google Scholar