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Technical Paper

Fungal bioaerosols in biomethanization facilities

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Pages 1198-1210 | Received 05 Apr 2018, Accepted 20 Jun 2018, Published online: 27 Aug 2018

References

  • Amon, T., B. Amon, V. Kryvoruchko, W. Zollitsch, K. Mayer, and L. Gruber. 2007. Biogas production from maize and dairy cattle manue-Influence of biomass composition on the methane yield. Agric., Ecosyst. & Environ. 118 (1–4):173–182. doi:10.1016/j.agee.2006.05.007.
  • Anastasi, A., G.C. Varese, and V.F. Marchisio. 2005. Isolation and identification of fungal communities in compost and vermicompost. Mycologia 97:33–44. doi:10.3852/mycologia.97.1.33.
  • Anderson, M. J. 2005. PERMANOVA: A FORTRAN computer program for permutational multivariate analysis of variance. Auckland, New Zealand: Department of Statistics, University of Auckland.
  • Bouallagui, H., Y. Touhami, R. B. Cheikh, and M. Hamdi. 2005. Bioreactor performance in anaerobic digestion of fruit and vegetable wastes. Process Biochem. 40 (3–4):989–995. doi:10.1016/j.procbio.2004.03.007.
  • BüNger, J., B. Schappler-Scheele, R. Hilgers, and E. Hallier. 2007. A 5-year follow-up study on respiratory disorders and lung function in workers exposed to organic dust from composting plants. Int. Arch. of Occup. and Environ. Health. 80:306–312. doi:10.1007/s00420-006-0135-2.
  • Bünger, J., M. Antlauf-Lammers, T.G. Schulz, A.G. Westphal, M.M. MüLler, P. Ruhnau, and E. Hallier. 2000. Health complaints and immunological markers of exposure to bioaerosols among biowaste collectors and compost workers. Occup Environ Med. 57:458–464. doi:10.1136/oem.57.7.458.
  • Caporaso, J. G., J. Kuczynski, J. Stombaugh, K. Bittinger, F.D. Bushman, E.K. Costello, R.N. Fiere, A. Gonzalez Pena, J.K. Goodrich, J.I. Gordon, G.A. Huttley, S.T. Kelley, D. Knights, J.E. Koenig, R. E. Ley, C.A. Lozupone, D. McDonald, B.D. Muegge, M. Pirrung, J. Reeder, J.R. Sevinsky, P.J. Turnbaugh, W. A. Walters, J. Widmann, T. Yatsunenko, J. Zaneveld, and R. Knight. 2010. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods. 7 (5):335–336. doi:10.1038/nmeth.f.303.
  • Collagher, M., J. Campbell, and A.M. Brenner. 2017. Collaboration achieves effective management design at Brookfield Place Berth, Western Australia. Procedia Eng. 180 (2017):1763–1772. doi:10.1016/j.proeng.2017.04.339.
  • Dai, X., C. Hu, D. Zhang, and Y. Chen. 2017. A new method for the simultaneous enhancement of methane yield and reduction of hydrogen sulfide production in the anaerobic digestion of waste activated sludge. Bioresour. Technol. 243:914–921. doi:10.1016/j.biortech.2017.07.036.
  • De Gannes, V., G. Eudoxie, and H. J. William. 2013. Insights into fungal communities in composts revealed by 454-pyrosequencing. Implications for Hum. Health and Saf. Front. in Microbiol. 4:164. doi:10.3389/fmicb.2013.00164.
  • Dogra, V., A. K. Sinha, R. Saxena, and D. Talwar. 2016. Aspergillus march: From ABPA to aspergilloma to subacute invasive aspergillosis. Allergy, Asthma & Clin. Immunol. 12:64. doi:10.1186/s13223-016-0170-9.
  • Domingo, J. L., and M. Nadal. 2009. Domestic waste composting facilities: A review of human health risks. Environ. Int. 35 (2):382–389. doi:10.1016/j.envint.2008.07.004.
  • Dubuis, M.E., H. M’Bareche, M. Veillette, B. Bakhiyi, J. Zayed, J. Lavoie, and C. Duchaine. 2017. Bioaerosols concentrations in working areas in biomethanization facilities. J. Air Waste Manage. Assoc. 67 (11):1258–1271. doi:10.1080/10962247.2017.1356762.
  • Edgar, R.C. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinf. 26 (19):2460–2461. doi:10.1093/bioinformatics/btq461.
  • Edgar, R.C. 2013. UPARSE: Highly accurate OTU sequences from microbial amplicon reads. Nat. Methods 10 (10):996–998. doi:10.1038/nmeth.2604.
  • Edgar, R.C., B.J. Haas, J.C. Clemente, C. Quince, and R. Knight. 2011. UCHIME improves sensitivity and speed of chimera detection. Bioinf. 27 (16):2194–2200. doi:10.1093/bioinformatics/btr381.
  • El-Mashad, H.M., G. Zeeman, W.K.P. Van Loon, G.P.A. Bot, and G. Lettinga. 2003. Effect of temperature and temperature fluctuation on thermophilic anaerobic digestion of cattle manure. 95 (2):191–201.
  • Epstein, E., N.C. Wu, C. Youngberg, and G. Croteau. 2001. Dust and bioaerosols at a biosolids composting facility. Compost Sci. & Utilisation. 9 (3):250–255. doi:10.1080/1065657X.2001.10702042.
  • Floudas, D., [xxx et al.]. 2012. The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 Fungal Genomes. Sci. 336:1715. doi:10.1126/science.1221748.
  • Fuchs, J.G., and B. Bieri. 2000. New biotests to measure the biological qualities of composts. Agrarforschung. 7:314–319.
  • Fung, F., and R.F. Clark. 2004. Health effects of mycotoxins: A toxicological overview. J. Toxicol. Clin. Toxicol. 42 (2):217–234. doi:10.1081/CLT-120030947.
  • Geiser, D.M., C. Gueidan, J. Miadlikowska, F. Lutzoni, F. Kauff, V. Hofstetter, E. Fraker, C.L. Schoch, L. Tibell, W.A. Untereiner, and A. Aptroot. 2006. Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae. Mycologia. 98 (Iss):6. doi:10.1080/15572536.2006.11832633.
  • Greenberger, P.A. 2002 November. Allergic bronchopulmonary aspergillosis. J. of Allergy and Clin. Immunol. 110 (5):685–692. doi:10.1067/mai.2002.130179.
  • Haitjema, C. H., K.V. Solomon, J.K. Henske, M.K. Theodorou, and M.A. O’Malley. 2014. Anaerobic gut fungi: Advances in isolation, culture, and cellulolytic enzyme discovery for biofuel production. Biotechnol. and Bioeng. 111:1471–1482. doi:10.1002/bit.25264.
  • Hansgate, A.M., P.D. Schloss, A.G. Hay, and L.P. Walker. 2005. Molecular characterization of fungal community dynamics in the initial stages of composting. FEMS Microbiol. Ecol. 51:209–214. doi:10.1016/j.femsec.2004.08.009.
  • Haugland, R.A., M. Varma, L.J. Wymer, and S.J. Vesper. 2004. Quantitative PCR analyses of selected Aspergillus, Penicillium and Paecilomyces species. Syst. Appl. Microbiol. 27 (2):198–210. doi:10.1078/072320204322881826.
  • Hibbett, D.S., and P.B. Matheny. 2009. The relative ages of ectomycorrhizal mushrooms and their plant hosts estimated using Bayesian relaxed molecular clock analyses. BMC Biol. 7:13. doi:10.1186/1741-7007-7-13.
  • Hoorman, J.J. 2011. The role of soil fungus. Fact sheet. Agricultural and Natural Resources. SAG-14-11. Columbus, OH: Ohio State University.
  • Hoornweg, D., and P. Bhada-Tata. 2012. What a waste: A global review of solid waste management. Urban Development Series; Knowledge Papers no. 15. Washington, DC: World Bank. https://openknowledge.worldbank.org/handle/10986/17388 (accessed November 14, 2017).
  • Ishii, K., M. Fukui, and S. Takii. 2000. Microbial succession during a composting process as evaluated by denaturing gradient gel electrophoresis analysis. J. Appl. Microbiol. 89:768–777. doi:10.1046/j.1365-2672.2000.01177.x.
  • Karakurt, I., G. Aydin, and K. Aydiner. February 2011. Mine ventilation air as a sustainable energy source. Renewable Sustainable Energy Rev. 15 (2):1042–1049. doi: 10.1016/j.rser.2010.11.030.
  • Kazda, M., S. Langer, and F.R. Bengelsdorf. 2014. Fungi open new possibilities for anaerobic fermentation of organic residues. Energy, Sustainability and Soc. 4:6. doi:10.1186/2192-0567-4-6.
  • Langarica-Fuentes, A., U. Zafar, A. Heyworth, T. Brown, G. Fox, and D.G. Robson. 2014. Fungal succession in an in-vessel composting system characterized using 454 pyrosequencing. FEMS Microbiol. Ecol. 88:296–308. doi:10.1111/1574-6941,12293.
  • Latgé, J.P. 1999. Aspergillus fumigatus and Aspergillosis. Clin.Microbiol. Rev. 12 (2):310–350.
  • Le Goff, O., V. Bru-Adan, H. Bacheley, J.J. Godon, and N. Wéry. 2010. The microbial signature of aerosols produced during the thermophilic phase of composting. J. Appl. Microbiol. 108:325–340. doi:10.1111/j.1365-2672.
  • Lee, S.Y., and G.D. Holder. June 2001. Methane hydrates potential as a future energy source. Fuel Process. Technol. 71 (1–3):181–186. doi: 10.1016/S0378-3820(01)00145-X.
  • Lim, S.L., L.H. Lee, and T.Y. Wu. 2016 January16.Sustainability of using composting and vermicomposting technologies for organic solid waste biotransformation: recent overview, greenhouse gases, emissions and economic analysis. J. Cleaner Prod. 111 (Part A):262–278. doi:10.1016/j.jclepro.2015.08.083.
  • Macias-Corral, M., Z. Samani, A. Hanson, G. Smith, P. Funk, H. Yu, and J. Longworth. 2008. Anaerobic digestion of municipal solid waste and agricultural waste and the effect of co-digestion with dairy cow manure. Bioresour. Technol. 99 (17):8288–8293. doi:10.1016/j.biortech.2008.03.057.
  • Mahajan, J., and J.A. Vakhariya. 2016. Waste management: A reverse supply chain perspective. Vikalpa 41 (3):197–208. doi:10.1177/0256090916659029.
  • Mata-Alvarez, J. 2003. Biomethanization of the organic fraction of municipal solid waste. London, UK: IWA publishing.
  • Matsuzawa, T., R. Tanka, Y. Horie, T. Gonoi, and T. Yaguchi. 2010. Development of rapid and specific molecular discrimination methods for pathogenic Emericella species. Jap. J. of Med. Mycol. 51:109–116. doi:10.3314/jjmm.51.109.
  • Mbareche, H., M. Veillette, L. Bonifait, M.E. Dubuis, Y. Bernard, G. Marchand, G.J. Bilodeau, and C. Duchaine. 2017. A next generation sequencing approach with a suitable bioinformatics workflow to study fungal diversity in bioaerosols released from two different types of compost plants. Sci. Total Environ. 601–602:1306–1314. doi:10.1016/j.scitotenv.2017.05.235.
  • Mistry, J., R.D. Finn, S.R. Eddy, A. Bateman, and M. Punta. 2013. Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions. Nucleic Acids Res. 41:e121. doi:10.1093/nar/gkt263.
  • Morgenstern, I., S. Klopman, and D.S. Hibbett. 2008. Molecular evolution and diversity of lignin degrading heme peroxidases in the Agaricomycetes. J. of Mol. Evol. 66:243. doi:10.1007/s00239-008-9079-3.
  • Murto, M., L. Björnsson, and B. Mattiasson. 2004. Impact of food industrial waste on anaerobic co-digestion of sewage sludge and pig manure. J. Environ. Manage. 70 (2):101–107.
  • Nucci, M., and E. Anaissie. 2007. Fusarium infections in immunocomprised patients. Clin. Microbiol. Rev. 20(4):695–704. doi:10.1128/CMR.00014-07.
  • Persoons, R., S. Parat, M. Stoklov, A. Perdrix, and A. Maitre. 2010. Critical working tasks and determinants of exposure to bioaerosols and MVOC at composting facilities. Int. J. of Hyg. and Environ. Health. 213 (2010):247–338. doi:10.1016/j.ijheh.2010.06.001.
  • Pieckova, E., and K. Wilkins. 2004. Airway toxicity of house dust and its fungal composition. Ann. of Agric. and Environ. v 11:67–73.
  • Pitt, J.I., and A.D. Hocking. 2009. The ecology of fungal food spoilage. In Fungi and food spoilage, ed. Boston, MA: Springer Science.
  • Rodriguez, Z. C., and M.G. Ramos. 2014. Acremonium species associated fungemia: A novel pathogen in the immunosuppressed patient. Boletín de la Asociación Médica de Puerto Rico 106 (3):29–31.
  • Ryckeboer, J., J. Mergaert, K. Vaes, S. Klammer, D. De Clercq, J. Coosemans, et al.2003. A survey of bacteria and fungi occurring during composting and self-heating processes. Ann. of Microbiol. 53:349–410.
  • Sánchez-Monedero, M. A., E.I. Stentiford, and S.T. Urpilainen. 2005. Bioaerosol generation at large-scale green waste composting plants. J. Air & Waste Manage. Assoc. 55 (5):612–618. doi:10.1080/10473289.2005.10464652.
  • Schloss, P. D. et al. 2009. Introducing mother: Open-source, platform-independent, communitt-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75 (23):7537–7541. doi:10.1128/AEM.01541-09.
  • Selman, M., Y. Lacasse, A. Pardo, and Y. Cormier. 2010. Hypersensitivity pneumonitis caused by fungi. Proc. of the Am. Thoracic. Soc. 7:229–236. doi:10.1513/pats.200906-041AL.
  • Sosnowski, P., A. Wieczorek, and S. Ledakowicz. 2003. Anaerobic co-digestion of sewage sludge and organic fraction of municipal solid wastes. Adv. Environ. Res. 7(3):609–616. doi:10.1016/S1093-0191(02)00049-7.
  • Swan, J.R. M., A. Kelsey, and B. Crook. 2003. Occupational and environmental exposure to bioaerosols from composts and potential health effects—A critical review of published data. Research Report 130. Health & Safety Executive, The Composting Association.
  • Sykes, P., K. Jones, and J.D. Wildsmith. 2007. Managing the potential public health risks from bioaerosol liberation at commercial composting sites in the UK: An analysis of the evidence base. Resour., Conserv. and Recycl. 52:410. doi:10.1016/j.resconrec.2007.05.005.
  • Taha, P.M.P., S.J.T. Pollard, U. Sarkar, and P. Longhurst. 2005. Estimating fugitive bioaerosol releases from static compost windrows: Feasibility of a portable wind tunnel approach. Waste Manage. 25:445–450. doi:10.1016/j.wasman.2005.02.013.
  • Tedersoo, L., S. Anslan, M. Bahram, S. Põlme, T. Riit, I. Liiv, U. Kõljalg, V. Kisand, R.H. Nilsson, F. Hildebrand, P. Bork, and K. Abarenkov. 2015. Shotgun metagenomes and multiple primer pair barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi. MycoKeys 10:4852. doi:10.3897/mycokeys.10.4852.
  • United Nations Department of Social and Economic Development. n.d. Sustainable Development Knowledge Platform Goal 11: Make cities and human settlements inclusive, safe, resilient and sustainable. https://sustainabledevelopment.un.org/sdg11( accessed August 1, 2017).
  • Velegraki, A., C. Cafarchia, G. Gaitanis, R. Iatta, and T. Boekhou. 2015. Malassezia infections in humans and animals: Pathophysiology, detection, and treatment. PLoS Pathog. 11 (1):e1004523. doi:10.1371/journal.ppat.1004523.
  • Viegas, C., T. Faria, M. Dos Santos, E. Carolino, Q.A. Gomes, R. Sabino, and S. Viegas. 2015. Fungal burden in waste industry: An occupational risk to be solved. Environ. Monit. Assess. 187:199. doi:10.1007/s10661-015-4412-y.
  • Wéry, N. 2014. Bioaerosols from composting facilities—A review. Front. Cell. Infect. Microbiol. 4:42. doi:10.3389/fcimb.2014.00042.
  • Wyngaarden, J.B., L.H. Smith, and J.C. Bennett, eds. 1992. Cecil textbook of medicine, 19th ed., 399 and 407. Philadelphia, PA: W.B. Saunders.

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