cDNA-AFLP analysis of salicylic acid- and calcium chloride-induced transcript derived fragments under drought in tomato (Solanum lycopersicum)

References

• Tamirisa S, Vudem DR, Khareedu VR. Overexpression of pigeonpea stress-induced cold and drought regulatory gene (CcCDR) confers drought, salt, and cold tolerance in Arabidopsis. J Exp Bot. 2014;65(17):4769–4781.
   PubMed Web of Science ®Google Scholar
• Wang W, Vinocur B, Altman A. Plant responses to drought, salinity and extreme temperatures: towards genetic engineering for stress tolerance. Planta. 2003;218(1):1–14.
   PubMed Web of Science ®Google Scholar
• Wu W, Ma BL, Whalen JK. Enhancing rapeseed tolerance to heat and drought stresses in a changing climate: perspectives for stress adaptation from root system architecture. Adv Agronomy. 2018;151:87–157.
   Web of Science ®Google Scholar
• Bhattarai K, Louws FJ, Williamson JD, et al. Diversity analysis of tomato genotypes based on morphological traits with commercial breeding significance for fresh market production in eastern USA. Aust J Crop Sci. 2016;10(8):1098–1103.
   Google Scholar
• Kang G, Li G, Guo T. Molecular mechanism of salicylic acid-induced abiotic stress tolerance in higher plants. Acta Physiol Plant. 2014;36(9):2287–2297.
   Web of Science ®Google Scholar
• Sha HJ, Liu HL, Hu BW, et al. Effect of salicylic acid on the dry matter and nitrogen accumulation, partitioning and translocation in two contrasting rice genotypes under salt stress. Pak J Bot. 2019;51(5):1541–1550.
   Web of Science ®Google Scholar
• Fayez KA, Bazaid SA. Improving drought and salinity tolerance in barley by application of salicylic acid and potassium nitrate. J Saudi Soc Agric Sci. 2014;13(1):45–55.
   Google Scholar
• Farooq M, Wahid A, Lee DJ, et al. Drought stress: comparative time course action of the foliar applied glycinebetaine, salicylic acid, nitrous oxide, brassinosteroids and spermine in improving drought resistance of rice. J Agronomy Crop Sci. 2010; 196(5):336–345.
   Web of Science ®Google Scholar
• Chavoushi M, Najafi F, Salimi A, et al. Improvement in drought stress tolerance of safflower during vegetative growth by exogenous application of salicylic acid and sodium nitroprusside. Ind Crops Prod. 2019; 134:168–176.
   Web of Science ®Google Scholar
• Cacho M, Domínguez AT, Elena-Rosselló JA. Role of polyamines in regulating silymarin production in Silybum marianum (L.) Gaertn (Asteraceae) cell cultures under conditions of calcium deficiency. J Plant Physiol. 2013;170(15):1344–1348.
   PubMed Web of Science ®Google Scholar
• Hu W, Tian SB, Di Q, et al. Effects of exogenous calcium on mesophyll cell ultrastructure, gas exchange, and photosystem II in tobacco (Nicotiana tabacum Linn.) under drought stress.Photosynthetica. 2018; 56(4):1204–1211.
   Web of Science ®Google Scholar
• Shi H, Ye T, Zhong B, et al. Comparative proteomic and metabolomic analyses reveal mechanisms of improved cold stress tolerance in bermudagrass (Cynodon dactylon (L.) Pers.) by exogenous calcium. J Integr Plant Biol. 2014;56(11):1064–1079.
   PubMed Web of Science ®Google Scholar
• An B, Li B, Qin G, et al. Exogenous calcium improves viability of biocontrol yeasts under heat stress by reducing ROS accumulation and oxidative damage of cellular protein. Curr Microbiol. 2012;65(2):122–127.
   PubMed Web of Science ®Google Scholar
• Wang X, Komatsu S. Proteomic analysis of calcium effects on soybean root tip under flooding and drought stresses. Plant Cell Physiol. 2017; 58(8):1405–1420.
   PubMed Web of Science ®Google Scholar
• Song Y, Wang Z, Bo W, et al. Transcriptional profiling by cDNA-AFLP analysis showed differential transcript abundance in response to water stress in Populus hopeiensis. BMC Genomics. 2012;13(1):286.
   PubMed Web of Science ®Google Scholar
• Alimohammadi A, Shiran B, Martínez-Gómez P, et al. Identification of water-deficit resistance genes in wild almond Prunus scoparia using cDNA-AFLP. Sci Hortic. 2013;159:19–28.
   Web of Science ®Google Scholar
• Bidabadi MS, Shiran B, Fallahi H, et al. Identification of differential expressed transcripts of almond (Prunus dulcis ‘Sefied’) in response to water-deficit stress by cDNA-AFLP. J For Res. 2015; 20(4):403–410.
   Web of Science ®Google Scholar
• Archangi A, Heidari B, Mohammadi-Nejad G. Association between seed yield-related traits and cDNA-AFLP markers in cumin (Cuminum cyminum) under drought and irrigation regimes. Ind Crops Prod. 2019;133:276–283.
   Web of Science ®Google Scholar
• Zhang D, Xu X. Effect of salicylic acid and calcium chloride on physiological characteristics of tomato seed-lings under drought stress. Zhejiang Agric J. 2016;28(10):1687–1694.
   Google Scholar
• Hummon AB, Lim SR, Difilippantonio MJ, et al Isolation and solubilization of proteins after TRIzol extraction of RNA and DNA from patient material following prolonged storage. Biotechniques. 2007;42(4):467–472.
   PubMed Web of Science ®Google Scholar
• Bassam BJ, Caetano-Anollés G, Gresshoff PM. Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal Biochem. 1991;196(1):80–83.
   PubMed Web of Science ®Google Scholar
• Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods. 2001;25(4):402–408.
   PubMed Web of Science ®Google Scholar
• Cao L, Lu X, Zhang P, et al. Systematic analysis of differentially expressed maize ZmbZIP genes between drought and rewatering transcriptome reveals bZIP family members involved in abiotic stress responses. Int J Mol Sci. 2019; 20(17):4103.
   PubMed Web of Science ®Google Scholar
• Zhong B. Function analysis of PYR/PYL interacting protein POSF21 in Arabidopsis. Chinese Academy of Sciences (Wuhan Botanical Garden); 2016.
   Google Scholar
• Haider MS, Kurjogi MM, Khalil-Ur-Rehman M, et al. Grapevine immune signaling network in response to drought stress as revealed by transcriptomic analysis. Plant Physiol Biochem. 2017;121:187–195.
   PubMed Web of Science ®Google Scholar
• Park CJ, Seo YS. Heat shock proteins: a review of the molecular chaperones for plant immunity. Plant Pathol J. 2015;31(4):323–333.
   PubMed Web of Science ®Google Scholar
• Xu J, Shu J, Zhang Q. Expression of the Tribolium castaneum (Coleoptera: Tenebrionidae) hsp83 gene and its relation to oogenesis during ovarian maturation. J Genet Genomics. 2010; 37(8):513–522.
   PubMed Web of Science ®Google Scholar
• Dong H, Xu B, Ji K. Comparative transcriptome analysis of genes involved in response to thermal stress and leaf colour change of Acer palmatum. Sci Hortic. 2019;255:77–85.
   Web of Science ®Google Scholar
• Haider MS, Zhang C, Kurjogi MM, et al. Insights into grapevine defense response against drought as revealed by biochemical, physiological and RNA-Seq analysis. Sci Rep. 2017;7(1):1–15.
   PubMed Web of Science ®Google Scholar
• Popova OV, Dietz KJ, Golldack D. Salt-dependent expression of a nitrate transporter and two amino acid transporter genes in Mesembryanthemum crystallinum. Plant Mol Biol. 2003;52(3):569–578.
   PubMed Web of Science ®Google Scholar
• Aranjuelo I, Molero G, Erice G, et al. Plant physiology and proteomics reveals the leaf response to drought in alfalfa (Medicago sativa L.). J Exp Bot. 2011;62(1):111–123.
   PubMed Web of Science ®Google Scholar
• Chen J, Song Y, Zhang H, et al. Genome-wide analysis of gene expression in response to drought stress in Populus simonii. Plant Mol Biol Rep. 2013;31(4):946–962.
   Web of Science ®Google Scholar
• Matsuda S, Funabiki A, Furukawa K, et al. Genome-wide analysis and expression profiling of half-size ABC protein subgroup G in rice in response to abiotic stress and phytohormone treatments. Mol Genet Genomics. 2012;287(10):819–835.
   PubMed Web of Science ®Google Scholar
• Nguyen VNT, Moon S, Jung K-H. Genome-wide expression analysis of rice ABC transporter family across spatio-temporal samples and in response to abiotic stresses. J Plant Physiol. 2014;171(14):1276–1288.
   PubMed Web of Science ®Google Scholar
• Matsuda S, Takano S, Sato M, et al. Rice stomatal closure requires guard cell plasma membrane ATP-binding cassette transporter RCN1/OsABCG5. Mol Plant. 2016;9(3):417–427.
   PubMed Web of Science ®Google Scholar
• Li W, Zhang C, Lu Q, et al. The combined effect of salt stress and heat shock on proteome profiling in Suaeda salsa. J Plant Physiol. 2011;168(15):1743–1752.
   PubMed Web of Science ®Google Scholar
• Zhao P, Lu J. MAIGO2 is involved in gibberellic acid, sugar, and heat shock responses during germination and seedling development in Arabidopsis. Acta Physiol Plant. 2014;36(2):315–321.
   Web of Science ®Google Scholar
• Chaudhary N, Khurana P. Cloning, functional characterisation and transgenic manipulation of vitamin E biosynthesis genes of wheat. Funct Plant Biol. 2013;40(11):1129–1136.
   PubMed Web of Science ®Google Scholar
• Xu G, Li C, Yao Y. Proteomics analysis of drought stress-responsive proteins in Hippophae rhamnoides L. Plant Mol Biol Rep. 2009;27(2):153–161.
   Web of Science ®Google Scholar
• Ji CY, Kim YH, Kim HS, et al. Molecular characterization of tocopherol biosynthetic genes in sweetpotato that respond to stress and activate the tocopherol production in tobacco. Plant Physiol Biochem. 2016;106:118–128.
   PubMed Web of Science ®Google Scholar
• Kuluev B, Mikhaylova E, Ermoshin A, et al. The ARGOS-LIKE genes of Arabidopsis and tobacco as targets for improving plant productivity and stress tolerance. J Plant Physiol. 2019;242:153033.
   PubMed Web of Science ®Google Scholar
• Shi J, Gao H, Wang H, et al ARGOS8 variants generated by CRISPR-Cas9 improve maize grain yield under field drought stress conditions. Plant Biotechnol J. 2017;15(2):207–216.
   PubMed Web of Science ®Google Scholar
• Zhao Y, Tian X, Li Y, et al. Molecular and functional characterization of wheat ARGOS genes influencing plant growth and stress tolerance. Front Plant Sci. 2017;8:170.
   PubMed Web of Science ®Google Scholar
• Shi J, Habben JE, Archibald RL, et al. Overexpression of ARGOS genes modifies plant sensitivity to ethylene, leading to improved drought tolerance in both Arabidopsis and maize. Plant Physiol. 2015;169(1):266–282.
   PubMed Web of Science ®Google Scholar