Virulence and genetic variability among Colletotrichum lindemuthianum (Sacc. & Magnus) Briosi & Cavara isolates from common bean (Phaseolus vulgaris L.)

References

• Teshome A, Amsalu B, Gabrekiristos E. On-farm improved common bean variety demonstration and evaluation in Central Rift Valley of Ethiopia: case of bora, Adami-Tullu, jido and kombolcha districts. Ethiop J Crop Sci. 2022;9:1–10.
   Google Scholar
• Gabrekiristos E, Wondimu M. Emerging and reemerging diseases of common bean (Phaseolus vulgaris L.) in major production areas: in the case of Ethiopia. J Agric Sci. 2022;14(4):19–34.
   Google Scholar
• Gonçalves-Vidigal MC, Meirelles AC, Poletine JP, et al. Genetic analysis of anthracnose resistance in ‘pitanga’ dry bean cultivar. Plant Dis. 2012;131(3):423–429.
   Google Scholar
• Mpeguzi M, Susan NM, Mabagala R, et al. Races of C. lindemuthianum (sacc. & magnus) Briosi & cavara in major bean growing regions in tanzania. Afr J Plant Sci. 2020;14(8):308–314.
   Google Scholar
• Pastor-Corrales MA, Otoya MM, Molina A. Resistance to colletotrichum lindemuthianum isolates from Middle america and andean South america in different common bean races. Plant Dis. 1995;79(1):63–67.
   Web of Science ®Google Scholar
• Ansari KI, Palacios N, Araya C, et al. Pathogenic and genetic variability among colletotrichum lindemuthianum isolates of different geographic origins. Plant Pathol. 2004;53(5):635–642.
   Web of Science ®Google Scholar
• Mahuku GS, Jara CE, Cajiao C, et al. Sources of resistance to C. lindemuthianum in the secondary gene Pool of Phaseolus vulgaris and in crosses of primary and secondary gene pools. Plant Dis. 2002;86(12):1383–1387.
   PubMed Web of Science ®Google Scholar
• Kelly JD, Afanador L, Cameron L. New races of colletotrichum lindemuthianum in Michigan and implications in dry bean resistance breeding. Plant Dis. 1994;78(9):892–894.
   Web of Science ®Google Scholar
• Mahuku SG, Riascos JJ. Virulence and molecular diversity within C. lindemuthianum isolates from andean and mesoamerican bean varieties and regions. European J Plant Pathol. 2004;110(3):253–263. 10.1023/B:EJPP.0000019795.18984.74.
   Web of Science ®Google Scholar
• Barcelos Q, Souza E, Silva KJD. Vegetative compatibility and genetic analysis of colletotrichum lindemuthianum isolates from Brazil. Genet Mol Res. 2011;10(1):230–242.
   PubMed Web of Science ®Google Scholar
• Pastor-Corrales MA. Standardization of differential varieties and designation of races of colletotrichum lindemuthianum. Phytopatholoy. 1991;81(6):694.
   Google Scholar
• Batureine MJ. Diversity of Colletotrichum lindemuthianum and reaction of common bean germplasm to anthracnose disease MSc thesis presented to the school of graduate studies of makerere university 2009.
   Google Scholar
• Meziadi C, Richard MS, Derquennes A, et al. Development of molecular markers linked to disease resistance genes in common bean based on whole genome sequence. Plant Sci. 2016;242:351–357.
   PubMed Web of Science ®Google Scholar
• BARC. Crop protection division progress report., Bako Research Center, Bako, Ethiopia. 2011.
   Google Scholar
• Rezene Y, Genome Wide Marker Trait Association Study, Molecular Characterization and Pathogenic Variability among Pseudocercospora griseola (Sacc.) Crous & Braun, Isolates the Causal Agent of Angular Leaf Spot Disease of Common Bean in Ethiopia. Doctoral Dissertation, Department of Cellular Microbial and Molecular Biology, Addis Ababa University. 2018.
   Google Scholar
• Rezene Y, Tesfaye K, Clare M, et al. Rep-PCR genomic fingerprinting revealed genetic diversity and population structure among ethiopian isolates of pseudocercospora griseola pathogen of the common bean (Phaseolus vulgaris L.). J Plant Pathol Microbiol. 2018;9(11):1–9.
   Google Scholar
• Kiryowa MJ, Ebinu A, Kyaligonza V, et al. Pathogenic variation of colletotrichum lindenuthianum causing anthracnose of beans (Phaseolus vulgaris) in Uganda. Int. J. Phytopathol. 2017;5(3):89–98.
   Google Scholar
• Schwartz HF. Anthracnose. In: hall, E. Compendium of bean diseases. St Paul, APS Press, 1991. pp. 16–17.
   Google Scholar
• Sharma N, Kumari N, Sharma SK, et al. Investigating the virulence and genetic diversity of colletotrichum lindemuthianum populations distributed in the North Western himalayan hill states. J Plant Pathol. 2019;101(3):677–688.
   Web of Science ®Google Scholar
• Kelly JD, Vallejo VA. A comprehensive review of the major genes conditioning resistance to anthracnose in common bean. HortSci. 2004;39(6):1196–1207.
   Web of Science ®Google Scholar
• Tu JC. A detached leaf technique for screening beans (Phaseolus vulgaris L.) in vitro against anthracnose (colletotrichum lindemuthianum. Can. J. Plant Sci. 1986;66(3):805–809.) https://cdnsciencepub.com/doi/10.4141/cjps86-100
   Web of Science ®Google Scholar
• Balardin RS, Kelly JD. Interaction between colletotrichum lindemuthianum races and gene Pool diversity in Phaseolus vulgaris. jashs. 1998;123(6):1038–1047.
   Web of Science ®Google Scholar
• Keterew Y, Dawit W, Thangavel S, et al. Physiological characterization and evaluation of common bean genotypes against anthracnose (colletotrichum lindemuthianum (sacc. and magnus) Lams-Scriber) races in west shewa. Ethiopia. Int J Life Sci. 2018;6(3):744–754.
   Google Scholar
• Versalovic J, de Bruijn FJ, Lupski JR. Repetitive sequence-based PCR (rep-PCR) DNA fingerprinting of bacterial genomes. In: de Bruijn FJ ,Lupski JR, Weinstock GM (eds) Bacterial genomes. Springer, Boston. 1998.
   Google Scholar
• De Bruijn FJ. Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergeneric consensus) sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria. Appl Environ Microbiol. 1992;58(7):2180–2187.
   PubMed Web of Science ®Google Scholar
• Nei M. Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci U S A. 1973;70(12):3321–3323.
   PubMed Web of Science ®Google Scholar
• Lewontin RC. Testing the theory of natural selection. Nature. 1972;236(5343):181–182.
   Google Scholar
• Peakall R, Smouse PE. GENALEX 6.1: genetic analysis in excel. Population genetic software for teaching and research. Mol Ecol Notes. 2006;6(1):288–295.
   Web of Science ®Google Scholar
• Saitou N, Nei M. The NJ method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 1987;4(4):406–425.
   PubMed Web of Science ®Google Scholar
• Tamura K, Stecher G, Peterson D, et al. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 2013;30(12):2725–2729.
   PubMed Web of Science ®Google Scholar
• González-Chavira M, Rodríguez-Guerra R, Hernández-Godínes F, et al. Analysis of pathotypes of colletotrichum lindemuthianum found in the Central region of Mexico and resistance in elite germplasm of Phaseolus vulgaris. Plant Dis. 2004;88(2):152–156. 1094/PDIS.2004.88.2.152
   PubMed Web of Science ®Google Scholar
• Sharma PN, Padder BA, Sharma OP, et al. Pathological and molecular diversity in colletotrichum lindemuthianum (bean anthracnose) across Himachal Pradesh, a North-Western himalayan state of India. Austral. Plant Pathol. 2007;36(2):191–197.
   Web of Science ®Google Scholar
• Padder BA, Sharma PN, Awale HE, et al. Colletotrichum lindemuthianum, the causal agent of bean anthracnose. J Plant Pathol. 2017;99(2):317–330.
   Web of Science ®Google Scholar
• Madakbas SY, Hiz CM, Kucukyan S, et al. Transfer of Co-1 gene locus for anthracnose disease resistance to fresh bean (Phaseolus vulgaris L.) through hybridization and molecular marker-assisted selection (MAS). JAS. 2013;5(4):94–102.
   Google Scholar
• Castro SA, Gonçalves-Vidigal MC, Gilio TAS, et al. Genetics and mapping of a new anthracnose resistance locus in andean common bean paloma. BMC Genomics. 2017;18(1):306.
   PubMedGoogle Scholar
• Gezahegn A, Chala A, Ayana G. Physiological races of colletotrichum lindemuthianum, the cause of bean anthracnose in major bean growing regions of Southern and Central Ethiopia. Eur J Plant Pathol. 2021;15(2):103–114.
   Google Scholar
• Mwesigwa JB. Diversity of Colletotrichum lindemuthianum and reaction of common bean germplasm to anthracnose disease. PhD thesis Makerere University, Uganda, 2009.
   Google Scholar
• Gonzaz KK. Identification of Colletotrichum lindemuthianum and introgression of its resistance gene(s) to common bean (Phaseolus vulgaris L.) adapted in Tanzania. MSc thesis presented to the School of Graduate studies of Sokoine University, Tanzania, 2016.
   Google Scholar
• Ddamulira G. Characterization of Pseudocercospora griseola, identification of local sources of resistance and effectiveness of gene pyramiding in controlling angular leaf spot in common bean. A PhD Thesis, Makerere University Kampala, Uganda, 2015.
   Google Scholar
• Sicard D, Buchet S, Michalakis Y, et al. Genetic variability of colletotrichum lindemuthianum in wild populations of common bean. Plant Pathol. 1997;46(3):355–365.
   Web of Science ®Google Scholar
• Silva-Damasceno KJ, Souza EA, Ishikawa FH. Characterization of colletotrichum lindemuthianum isolates from the state of Minas Gerais, Brazil. J Phytopathol. 2007;155(4):241–247.
   Web of Science ®Google Scholar
• Talamini V, Souza EA, Pozza EA, et al. Genetic divergence among and within colletotrichum lindemuthianum races assessed by RAPD. Fitopatol. bras. 2006;31(6):545–550.
   Google Scholar
• Marulanda ML, López AM, Isaza L, et al. Microsatellite isolation and characterization for colletotrichum spp., causal agent of anthracnose in andean blackberry. Genet Mol Res. 2014;13(3):7673–7685.
   PubMed Web of Science ®Google Scholar
• Zelalem F, Tesfaye K, Dagne K, et al. Genetic diversity and population structure of common bean (Phaseolus vulgaris L) germplasm of Ethiopia as revealed by microsatellite markers. Afr. J. Biotechnol. 2016;15(52):2824–2847.
   Google Scholar
• Da Silva RB, Valicente FH. Molecular characterization of Bacillus thuringiensis using rep PCR. Springer Plus. 2013;2(1):641.
   PubMedGoogle Scholar