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Article

Characterization of guava (Psidium guajava L.) germplasm through morphological traits and SCoT markers

ORCID Icon, , , , &
Pages 374-383 | Accepted 19 Oct 2022, Published online: 12 Nov 2022

References

  • Agarwal, A., Gupta, V., Haq, S. U., Jatav, P. K., Kothari, S. L., & Kachhwaha, S. (2019). Assessment of genetic diversity in 29 rose germplasms using SCoT marker. Journal of King Saud University – Science, 31(4), 780–788. https://doi.org/10.1016/j.jksus.2018.04.022
  • A.O.A.C. (1980). Methods of analysis (15th ed.). Association of the Official Analytical Chemists.
  • Azeem, S., Khan, A. I., Awan, F. S., Riaz, A., & Bahadur, S. (2012). Genetic diversity of rose germplasm in Pakistan characterized by random amplified polymorphic DNA (RAPD) markers. African Journal of Biotechnology, 11(47), 10650–10654.
  • Chen, C., Durand, E., Forbes, F., & Francois, O. (2007). Bayesian clustering algorithms ascertaining spatial population structure: A new computer program and a comparison study. Molecular Ecology Resources, 7(5), 747–756.
  • Choudhary, S. M., Musmade, A. M., & Singh, R. (2022). Impact of pruning time on bio-chemical parameters of guava (Psidium guajava L.). Indian Research Journal of Extension Education, 22(2), 84–89. https://doi.org/10.54986/irjee/2022/apr_jun/84-89
  • Collard, B. C. Y., & Mackill, D. J. (2009). Start codon targeted (SCoT) polymorphism: A simple, novel DNA marker technique for generating gene-targeted markers in plants. Plant Molecular Biology Reporter, 27(1), 86–93. https://doi.org/10.1007/s11105-008-0060-5
  • Dolkar, D., Bakshi, P., Wali, V. K., Bhushan, B., & Sharma, A. (2014). Growth and yield attributes of commercial guava (Psidium guajava L.) cultivars under sub-tropical condition. Indian Journal of Plant Physiology, 19(1), 79–82. https://doi.org/10.1007/s40502-014-0076-9
  • Doyle, J. J., & Doyle, J. J. (1987). A rapid DNA isolation procedure from small quantities of fresh leaf tissues. Phytochemical Bulletin, 19(1), 11–15.
  • Elframawy, A., Deif, H., & El-Bakatoushi, R. (2016). Genetic variation among fragmented populations of Atriplex halimus L. using start codon targeted (SCoT) and ITS1-5.8S-ITS2 region markers. American Journal of Molecular Biology, 6(02), 101. https://doi.org/10.4236/ajmb.2016.62011
  • Guo, D. L., Zhang, J. Y., & Liu, C. H. (2012). Genetic diversity in some grape varieties revealed by SCoT analyses. Molecular Biology Reports, 39(5), 5307–5313. https://doi.org/10.1007/s11033-011-1329-6
  • Haq, S., Jain, R., Sharma, M., Kachhwaha, S., & Kothari, S. L. (2014). Identification and characterization of micRosatellites in expressed sequence tags and their cross transferability in different plants. International Journal of Genomics, 12. https://doi.org/10.1155/2014/863948
  • Hoque, M., & Rahman, L. (2007). Estimation of Euclidian distance for different morpho-physilogical characters in some wild and cultivated rice genotypes (Oryza sativa L.). The Journal of Biological Sciences, 7(1), 77–79. https://doi.org/10.3923/jbs.2007.86.88
  • Jaccard, P. (1908). NouvellesRecherches sur la distribution florale. Bulletin de la SocieteVaudoise des Sciences Naturelles, 44(163), 223–270.
  • Jyani, A., Aulakh, P. S., Singh, A., & Singh, H. (2022). A survey on productivity status of guava (Psidium guajawa L.) orchards in Hisar district of Haryana. The Pharma Innovation Journal, 11(3), 1802–1808.
  • Kareem, A., Jaskani, M. J., Mehmood, A., Khan, I. A., Awan, F. S., & Sajid, M. W. (2018). Morpho-genetic profiling and phylogenetic relationship of guava (Psidium guajava l.) as genetic resources in Pakistan. Revista Brasileira de Fruticultura, 40(4). https://doi.org/10.1590/0100-29452018069
  • Kumar, G. M. S., Bhowmick, N., Chakraborty, A., Dey, A. N., Ghosh, A., & Dutta, P. (2022). Response of shoot pruning on growth, flowering and fruiting characteristics of guava under Sub-Himalayan Terai Region of West Bengal. Indian Journal of Ecology, 49(2), 502–507.
  • Kumari, S., Arumugam, N., Singh, R., Srivastav, M., Banoth, S., Mithra, A. C., Arun, M. B., Goswami, A. K., & Khan, Y. J. (2018). Diversity analysis of guava (Psidium guajava) germplasm collection. Indian Journal of Agricultural Sciences, 88(3), 489–497.
  • Kumar, C., Kumar, R., Singh, S. K., Goswami, A. K., Nagaraja, A., Paliwal, R., & Singh, R. (2020). Development of novel g-SSR markers in guava (Psidium guajaval.L) cv. Allahabad safeda and their application in genetic diversity, population structure and cross transferability studies. Plos One, https://doi.org/10.1371/journal.pone.0237538.
  • Liu, X., & Yang, G. (2012). Adventitious shoot regeneration of oriental lily (Lilium orientalis) and genetic stability evaluation based on ISSR marker variation. In Vitro Cellular & Developmental Biology - Plant, 48(2), 172–179. https://doi.org/10.1007/s11627-012-9429-0
  • Ma, Z., Liu, S., Liang, Z., Xu, S., & Hu, W. (2020). Analysis of genetic diversity of 45 guava germplasm evaluated using SSR markers. International Journal of Fruit Science, 20(3), 385–393. https://doi.org/10.1080/15538362.2019.1640168
  • Methela, N. J., Faruk, O., Islam, M. S., & Hossain, M. M. (2019). Morphological characterization of guava germplasm (Psidium sp.). Journal of Bioscience and Agriculture Research, 20(1), 1671–1680. https://doi.org/10.18801/jbar.200119.203
  • Omayio, D. G., Abong, G. O., Okoth, M. W., Gachuiri, C. K., & Mwangombe, A. (2022). Physicochemical and processing qualities of guava varieties in Kenya. International Journal of Fruit Science, 22(1), 22. https://doi.org/10.1080/15538362.2022.2039342
  • Padmakar, B., Sailaja, D., & Aswath, C. (2015). Molecular exploration of guava (Psidium guajava L.) genome using SSR and RAPD markers: A step towards establishing linkage map. Journal of Horticultural Sciences, 10(2), 130–135.
  • Pandey, P., Kumar, R., Mishra, D. S., Jeena, A. S., & Kumar, J. (2017). Morphological and molecular characterization of guava. International Journal of Chemical Studies, 5(4), 533–538.
  • Prakash, D. P., Narayanaswamy, P., & Sondur, S. N. (2002). Analysis of molecular diversity in guava using RAPD markers. Journal of Horticultural Science & Biotechnology, 77(3), 287–293. https://doi.org/10.1080/14620316.2002.11511494
  • Raji, M. R., & Farajpour, M. (2021). Genetic fidelity of regenerated plants via shoot regeneration of muskmelon by inter simple sequence repeat and flow cytometry. Journal of the Saudi Society of Agricultural Sciences, 20(2), 88–93. https://doi.org/10.1016/j.jssas.2020.12.003
  • Rohlf, F. J. (2000). NTSYSpc numerical taxonomy and multivariate analysis version 2.0.H (p. 25). Applied Biostatics Inc.
  • Samriti, S., Kaur, R., Malhotra, S., Malhotra, E. V., & Kumar, P. (2017). Assessment of genetic diversity in Rubus ellipticus(smith) using molecular markers. Proceedings of Indian National Science Academy, 83(0), 669–679. https://doi.org/10.16943/ptinsa/2017/49120
  • Sanjana, U., Kavino, M., Auxcilia, J., & Raveendran, M. (2022). Evaluation of half sib progenies of guava var. Arka Kiran for fruit yield and quality. Biological Forum – an International Journal, 14(2), 1451–1455.
  • Sharma, S., Chahal, A., Prasad, H., Walia, A., Kumar, R., & Dobhal, S. (2022a). Identification, phylogeny and transcript profiling of ERF family genes during temperature stress treatment in Pea (Pisum sativum L.). Journal of Plant Biochemistry and Biotechnology, 31(3), 561–572. https://doi.org/10.1007/s13562-021-00709-6
  • Sharma, S., Chauhan, A., Kumar, R., Dobhal, S., Kaur, R., Kumar, K., & Verma, K. (2022b). Horticultural crops tackling stresses: Genetic and epigenetic alterations. Genetic Resources and Crop Evolution, 69(1), 11–38. https://doi.org/10.1007/s10722-021-01298-y
  • Sharma, S., Dobbal, S., Kumar, R., & Thakur, S. (2019). Morphological, physiological and molecular analysis of line 3 tester in Populus deltoides Bartr. Indian Journal of Plant Physiology. https://doi.org/10.1007/s40502-019-00479-3
  • Sharma, S., Dobhal, S., & Thakur, S. (2018). Analysis of genetic diversity in parents and hybrids of Populus deltoides Bartr. using microsatellite markers. Applied Biological Research, 20(3), 262–270. https://doi.org/10.5958/0974-4517.2018.00036.8
  • Sharma, S., Kaur, R., & Kumar, K. (2019). Studies on genetic fidelity of long term micropropagated culture derived plants of Ofra strawberry using molecular markers. Indian Journal of Horticulture, 76(4), 596–603. https://doi.org/10.5958/0974-0112.2019.00096.3
  • Sharma, S., Kaur, R., Kumar, K., & Prasad, H. (2021). Genetic variability in strawberry (Fragaria x ananassa Duch.) cultivars assessed by morphological traits and EST-SSR markers of Rubus ellipticus. Indian Journal of Biotechnology, 20(1), 81–90.
  • Sharma, S., Kaur, R., Solanke, A. K. U., Dubey, H., Tiwari, S., & Kumar, K. (2019). Transcriptome sequencing of Himalayan Raspberry (Rubus ellipticus) and development of simple sequence repeat markers. 3 Biotech, 9(4). https://doi.org/10.1007/s13205-019-1685-9
  • Sharma, S., & Sharma, A. (2018). Molecular markers based plant breeding. Advances in Research, 16(1), 1–15. https://doi.org/10.9734/AIR/2018/43316
  • Silva, F. A., Viana, A. P., Corrêa, C. C. G., Carvalho, B. M., Sousa, C. M. B., Amaral, B. D., Ambrosio, M., & Gloria, L. S. (2020). Impact of bayesian inference on the selection of Psidium guajava. Scientific Reports, 10(1), 1999. https://doi.org/10.1038/s41598-020-58850-6
  • Silva, F. A., Viana, A. P., Corrêa, C. C. G., Santos, E. A., Oliveira, J. A. V. S., Andrade, J. D. G., Ribeiro, R. M., & Glória, L. S. (2021). Bayesian ridge regression shows the best fit for SSR markers in Psidium guajava among Bayesian models. Scientific Reports, 11(1), 13639. https://doi.org/10.1038/s41598-021-93120-z
  • Singh, T. J., Gupta, T., & Sharma, S. (2019). Development and purity identification of hybrids by using molecular marker in wild pomegranate (Punica granatum L.). Scientia Horticulturae, 247, 436–448. https://doi.org/10.1016/j.scienta.2018.12.007
  • Singh, S. K., Malhotra, S. K., Bhargava, R., Singh, R. S., & Shukla, A. K. (2017). Morphological and physiological characterization of guava (Psidium guajava) under hot-arid zone of Rajasthan. Indian Journal of Agricultural Sciences, 87(4), 491–495.
  • Sneath, P. H. A., & Sokal, R. R. (1973). NumericalTaxonomy. WH Freeman and Company.
  • Thalita, N. M., Lourismar, M. A., Petterson, B. L., Leonarda, G. N., & Marco, A. A. B. (2017). Genetic diversity of Passiflora accessions based on morphophysiological seed descriptors. Revista Brasileira de Fruticultura, Jaboticabal, 39(5), 365. https://doi.org/10.1590/0100-29452017365

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