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Original Articles

The Screening of RNA Aptamers Specific for Carbonic Anhydrase I Using the Systematic Evolution of Ligands by an Exponential Enrichment Method (SELEX)

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Pages 697-708 | Received 16 Dec 2013, Accepted 29 May 2014, Published online: 08 Oct 2014

REFERENCES

  • Kivelä, A.J.; Kivelä, J.; Saarnio, J.; Parkkila, S. Carbonic anhydrase in normal gastrointestinal tract and gastrointestinal tumours. World J. Gastroenterol. 2005, 11, 155–163.
  • Sly, W.S.; Hu P.Y. Human carbonic anhydrase and carbonic anhydrase deficiencies. Annu. Rev. Biochem. 1995, 64, 375–401.
  • Winum, J.Y.; Cecchi, A.; Montero, J.L.; Innocenti, A.; Scozzafava, A.; Supuran, C.T.; Carbonic anhydrase inhibitors. Synthesis and inhibition of cytosolic/tumor-associated carbonic anhydrase isozymes I, II, and IX with boron-containing sulfonamides, sulfamides, and sulfamates: Toward agents for boron neutron capture therapy of hypoxic tumors. Bioorg. Med. Chem. Lett. 2005, 15, 33201–3306.
  • Supuran C.T.; Scozzafava A. Carbonic anhydrases as targets for medicinal chemistry. Bioorg. Med. Chem. 2007, 15, 4336–4350.
  • Bayram, E.; Senturk, M.; Kufrevioglu, O.I.; Supuran, C.T. In vitro inhibition of salicylic acid derivatives on human cytosolic carbonic anhydrase isozymes I and II. Bioorg. Med. Chem. 2008, 16, 9101–9105.
  • Supuran, C.T.; Scozzafava, A.; Casini, A. Carbonic anhydrase inhibitors. Med. Res. Rev. 2003, 23, 146–189.
  • Chang, X.; Zheng, Y.; Yang, Q.; Wang, L.; Pan, J.; Xia, Y.; Yan, X.; Han, J. Carbonic anhydrase I (CA1) is involved in the process of bone formation and is susceptible to anylosing spondylitis. Arthritis Res. Ther. 2012, 14, R176.
  • Takakura, M.; Yokomizo, A.; Tanaka, Y.; Kobayashi, M.; Jung, G.; Banno, M.; Sakuma, T.; Imada, K.; Oda, Y.; Kamita, M.; Honda, K.; Yamada, T.; Naito, S.; Ono, M. Carbonic anhydrase I as a new plasma biomarker for prostate cancer. ISNR Oncol. 2012, 768190.
  • Fonti, R.; Latella, G.; Caprilli, R.; Frieri, G.; Marcheggiano, A.; Sambuy, Y. Carbonic anhydrase I reduction in colonic mucosa of patients with active ulcerative colitis. Dig. Dis. Sci. 1998, 43, 2086–2092.
  • Winum, J.Y.; Vullo, D.; Casini, A.; Montero, J.L.; Scozzafava, A.; Supuran, C.T. Carbonic anhydrase inhibitors: Inhibition of transmembrane, tumor- associated isozyme IX, and cytosolic isozyme I and II with aliphatic sulfamates. J. Med. Chem. 2003, 46, 5471–5477.
  • Sarkaya, S.B.Ö.; Gulcin, I.; Supuran, C.T. Carbonic anhydrase inhibitors: Inhibition of human erythrocytes isozymes I and II with a series of phenolic acids. Chem. Biol. Drug Des. 2010, 75, 515–520.
  • Sentürk, M.; Gülcin, I.; Beydemir, S.; Küfrevioglu, Ö.I.; Supuran, C.T. In vitro inhibition of human carbonic anhydrase I and II isozymes with natural phenolic compounds. Chem. Biol. Drug Des. 2011, 77, 494–499.
  • Que-Gewirth, N.S.; Sullenger, B.A. Gene therapy progress and prospects: RNA aptamers. Gene Ther. 2007, 14, 283–291.
  • Khati, M. The future of aptamers in medicine. J. Clin. Pathol. 2010, 63, 480–487.
  • Ellington, A.D.; Szostak, J.W. In vitro selection of RNA molecules that bind specific ligands. Nature 1990, 346, 818–822.
  • Tuerk, C.; Gold, L. Systematic evolution of ligands by exponential enrichment: RNA lignads to bacteriophage T4 DNA polymerase. Science 1990, 249, 505–510.
  • Stoltenburg, R.; Reinemann, C.; Strehlitz, B. SELEX-A (r)evolutionary method to generate high-affinity nucleic acid ligands. Biomol. Eng. 2007, 24, 381–403.
  • Shigdar, S.; Lin, J.; Yu, Y.; Pastuovic, M.; Wei, M.; Duan, W. RNA aptamer against a cancer stem cell marker epithelial cell adhesion molecule. Cancer Sci. 2011, 102, 991–998.
  • Jhaveri, S.D.; Ellington, A.D. In vitro selection of RNA aptamers to a protein target by filter immobilization. Curr. Protoc. Mol. Biol. 2000, 24.3.1–24.3.25.
  • Jeon, J.; Lee, K.H.; Rao, J. A strategy to enhance the binding affinity of fluorophore-aptamer pairs for RNA tagging with neomycin conjugation. Chem. Commun. 2012, 48 10034–10036.
  • Gasteiger, E.; Hoogland, C.; Gattiker, A.; Duvaud, S.; Wilkins, M. R.; Appel, R. D.; Bairoch, A. Protein identification and analysis tools on the ExPASy server. In Walker, J.M. (ed.), The Proteomics Protocols Handbook, Humana Press 2005, 571–607.
  • Supuran, C.T. Carbonic Anhydrases: novel therapeutic applications for inhibitors and activators. Nat. Rev. Drug Discov. 2008, 7, 168–181.
  • Cakir, U. In vitro inhibition effects of some new sulfonamide inhibitors on human carbonic anhydrase I and II. J. Enzyme Inhib. Med. Chem. 2004, 19, 257–261.
  • Kalina, P.H.; Shetier, D.J.; Lewis, R.A.; Kullerstrand, L.J.; Brubaker, R.F. 6-amino-2-benzothiazole-sulfonamide. The effect of a topical carbonic anhydrase inhibitor on aqueous humor formation in the normal human eye. Ophthalmology 1988, 95(6): 772–777.

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