Transcriptional Effects of Dietary Exposure of Oil-Contaminated Calanus finmarchicus in Atlantic Herring (Clupea harengus)

REFERENCES

• Altschul , S. F. , Madden , T. L. , Schaffer , A. A. , Zhang , J. , Zhang , Z. , Miller , W. and Lipman , D. J. 1997 . Gapped blast and psi-blast: A new generation of protein database search programs . Nucleic Acids Res. , 25 : 3389 – 3402 .
   PubMed Web of Science ®Google Scholar
• Andersen , C. L. , Jensen , J. L. and Orntoft , T. F. 2004 . Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets . Cancer Res. , 64 : 5245 – 5250 .
   PubMed Web of Science ®Google Scholar
• Bayne , C. J. and Gerwick , L. 2001 . The acute phase response and innate immunity of fish . Dev. Comp. Immunol. , 25 : 725 – 743 .
   PubMed Web of Science ®Google Scholar
• Bøhle , B. 1986 . Avoidance of petroleum hydrocarbons by the cod (Gadus morhua) . Fisk. Dir. Skr. Ser. Ernæring , 18 : 97 – 112 .
   Google Scholar
• Brown , E. D. , Baker , T. T. , Hose , J. E. , Kocan , R. M. , Marty , G. D. , McGurk , D. , Norcross , M. D. and Short , J. 1996 . Injury to the early life history stages of Pacific herring in Prince William Sound after the Exxon Valdez oil spill . Am. Fish. Soc. Symp. , 18 : 448 – 462 .
   Google Scholar
• Bue , B. G. , Sharr , S. and Seeb , J. E. 1998 . Evidence of damage to pink salmon populations inhabiting Prince William Sound, Alaska, two generations after the Exxon Valdez oil spill . Trans. Am. Fish. Soc. , 127 : 35 – 43 .
   Web of Science ®Google Scholar
• Bucheli , T. D. and Fent , K. 1995 . Induction of cytochrome P450 as a biomarker for environmental contamination in aquatic ecosystems . Crit. Rev. Environ. Sci. Technol. , 25 : 210 – 268 .
   Google Scholar
• Cambi , A. and Figdor , C. 2009 . Necrosis: C-type lectins sense cell death . Curr. Biol. , 19 : R375 – R378 .
   PubMedGoogle Scholar
• Carls , M. G. , Marty , G. D. and Hose , J. E. 2002 . Synthesis of the toxicological impacts of the Exxon Valdez oil spill on Pacific herring (Clupea pallasi) in Prince William Sound, Alaska, USA . Can. J. Fish. Aquat. Sci. , 59 : 153 – 172 .
   Web of Science ®Google Scholar
• Davis , A. P. , King , B. L. , Mockus , S. , Murphy , C. G. , Saraceni-Richards , C. , Rosenstein , M. , Wiegers , T. and Mattingly , C. J. 2011 . The Comparative Toxicogenomics Database: update 2011 . Nucleic Acids Res. , 39 ( Database issue ) Jan : D1067 – 72 .
   PubMedGoogle Scholar
• Conesa , A. , Gotz , S. , Garcia-Gomez , J. M. , Terol , J. , Talon , M. and Robles , M. 2005 . Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research . Bioinformatics , 21 : 3674 – 3676 .
   PubMed Web of Science ®Google Scholar
• Da Silveira , M. G. , Golovina , E. A. , Hoekstra , F. A. , Rombouts , F. M. and Abee , T. 2003 . Membrane fluidity adjustments in ethanol-stressed Oenococcus oeni cells . Appl. Environ. Microbiol. , 69 : 5826 – 5832 .
   PubMed Web of Science ®Google Scholar
• Devries , A. L. and Wohlschlag , D. E. 1969 . Freezing resistance in some Antarctic fishes . Science , 163 : 1073 – 1075 .
   PubMed Web of Science ®Google Scholar
• Devries , A. L. , Komatsu , S. K. and Feeney , R. E. 1970 . Chemical and physical properties of freezing point-depressing glycoproteins from Antarctic fishes . J. Biol. Chem. , 245 : 2901 – 2908 .
   PubMed Web of Science ®Google Scholar
• Devries , A. L. 1988 . The role of antifreeze glycopeptides and peptides in the freezing avoidance of Antarctic fishes . Comp. Biochem. Physiol. B Biochem. Mol. Biol. , 90 : 611 – 621 .
   Web of Science ®Google Scholar
• Dey , A. C. , Kiceniuk , J. W. , Williams , U. P. , Khan , R. A. and Payne , J. F. 1983 . Long-term exposure of marine fish to crude petroleum. 1. Studies on liver lipids and fatty acids in cod (Gadus morhua) and winter flounder (Pseudopleuronectes americanus). Comp. Biochem. Physiol. C Pharmacol. Toxicol . Endocrinol. , 75 : 93 – 101 .
   Google Scholar
• Dommasnes , A. , Melle , W. , Dalpadado , P. and Ellertsen , B. 2004 . Herring as a major consumer in the Norwegian Sea . ICES J. Mar. Sci. , 6 : 739 – 751 .
   Google Scholar
• Engelke , M. , Tahti , H. and Vaalavirta , L. 1996 . Perturbation of artificial and biological membranes by organic compounds of aliphatic, alicyclic and aromatic structure . Toxicol. In Vitro , 10 : 111 – 115 .
   PubMedGoogle Scholar
• Fletcher , G. L. , Hew , C. L. and Davies , P. L. 2001 . Antifreeze proteins of teleost fishes . Annu. Rev. Physiol. , 63 : 359 – 390 .
   PubMed Web of Science ®Google Scholar
• Garner , J. , Inglis , S. R. , Hook , J. , Separovic , F. and Harding , M. M. 2008 . A solid-state NMR study of the interaction of fish antifreeze proteins with phospholipid membranes . Eur. Biophys. J. Biophys. Lett. , 37 : 1031 – 1038 .
   PubMedGoogle Scholar
• Gene Ontology Consortium 2010. http://www.geneontology.org/ (http://www.geneontology.org/)
   Google Scholar
• Gomme , P. T. and McCann , K. B. 2005 . Transferrin: structure, function and potential therapeutic actions . Drug Discov. Today , 10 : 267 – 273 .
   PubMed Web of Science ®Google Scholar
• Harding , M. M. , Anderberg , P. I. and Haymet , A. D. J. 2003 . ‘Antifreeze’ glycoproteins from polar fish . Eur. J. Biochem. , 270 : 1381 – 1392 .
   PubMedGoogle Scholar
• Hasselberg , L. , Meier , S. , Svardal , A. , Hegelund , T. and Celander , M. 2004 . Effects of alkylphenols on CYP1A and CYP3A expression in first spawning Atlantic cod (Gadus morhua) . Aquat. Toxicol. , 67 : 303 – 313 .
   PubMed Web of Science ®Google Scholar
• Heintz , R. A. , Rice , S. D. , Wertheimer , A. C. , Bradshaw , R. F. , Thrower , F. P. , Joyce , J. E. and Short , J. W. 2000 . Delayed effects on growth and marine survival of pink salmon Oncorhynchus gorbuscha after exposure to crude oil during embryonic development . Mar. Ecol. Prog. Ser. , 208 : 205 – 216 .
   Web of Science ®Google Scholar
• Holst , J. C. , Røttingen , I. and Melle , W. 2004 . “ The herring ” . In The Norwegian Sea ecosystem , Edited by: Skjoldal , H. R. 203 – 226 . Trondheim : Tapir Academic Press .
   Google Scholar
• Hu , W. Y. , Jones , P. D. , DeCoen , W. , King , L. , Fraker , P. , Newsted , J. and Giesy , J. P. 2003 . Alterations in cell membrane properties caused by perfluorinated compounds . Comp. Biochem. Physiol. C Toxicol. Pharmacol. , 135 : 77 – 88 .
   PubMed Web of Science ®Google Scholar
• Hylland , K. 2006 . Polycyclic aromatic hydrocarbon (PAH) ecotoxicology in marine ecosystems . J. Toxicol. Environ. Health A , 69 : 109 – 123 .
   PubMed Web of Science ®Google Scholar
• Hylland , K. , Beyer , J. , Berntssen , M. , Klungsoyr , J. , Lang , T. and Balk , L. 2006 . May organic pollutants affect fish populations in the North Sea? . J. Toxicol. Environ. Health A , 69 : 125 – 138 .
   PubMed Web of Science ®Google Scholar
• Jimenez , M. , Aranda , F. J. , Teruel , J. A. and Ortiz , A. 2002 . The chemical toxic benzo[a]pyrene perturbs the physical organization of phosphatidylcholine membranes . Environ. Toxicol. Chem. , 21 : 787 – 793 .
   PubMedGoogle Scholar
• Kocan , R. M. and Hose , J. E. 1997 . “ Laboratory and field observations of sublethal damage in marine fish larvae: lessons from the effects of the Exxon Valdez oil spill ” . In Chemically induced alterations in functional development and reproduction of fishes , Edited by: Rolland , R. M. , Gilbertson , M. and Peterson , R. E. 167 – 176 . Pensacola, FL : SETAC Press .
   Google Scholar
• Kristiansen , E. and Zachariassen , K. E. 2005 . The mechanism by which fish antifreeze proteins cause thermal hysteresis . Cryobiology , 51 : 262 – 280 .
   PubMedGoogle Scholar
• Kurita , Y. , Meier , S. and Kjesbu , O. S. 2003 . Oocyte growth and fecundity regulation by atresia of Atlantic herring (Clupea harengus) in relation to body condition throughout the maturation cycle . J. Sea Res. , 49 : 203 – 219 .
   Web of Science ®Google Scholar
• Lavarias , S. , Dreon , M. S. , Pollero , R. J. and Heras , H. 2005 . Changes in phosphatidylcholine molecular species in the shrimp Macrobrachium borellii in response to a water-soluble fraction of petroleum . Lipids , 40 : 487 – 494 .
   PubMedGoogle Scholar
• Lavarias , S. , Garcia , F. , Pllero , R. J. and Heras , H. 2007 . Effect of water-soluble fraction of petroleum on microsomal lipid metabolism of Macrobrachium borellii (Arthropoda: Crustacea) . Aquat. Toxicol. , 82 : 265 – 271 .
   PubMedGoogle Scholar
• Lee , R. F. , Hagen , W. and Kattner , G. 2006 . Lipid storage in marine zooplankton . Mar. Ecol. Prog. Ser. , 307 : 273 – 306 .
   Web of Science ®Google Scholar
• Lie , K. K. , Meier , S. and Olsvik , P. A. 2009 . Effects of environmental relevant doses of pollutants from offshore oil production on Atlantic cod (Gadus morhua) . Comp. Biochem.Physiol. C Toxicol. Pharmacol. , 150 : 141 – 149 .
   PubMedGoogle Scholar
• Liebscher , R. S. , Richards , R. C. , Lewis , J. M. , Short , C. E. , Muise , D. M. , Driedzic , W. R. and Ewart , K. V. 2006 . Seasonal freeze resistance of rainbow smelt (Osmerus mordax) is generated by differential expression of glycerol-3-phosphate dehydrogenase, phosphoenolpyruvate carboxykinase, and antifreeze protein genes . Physiol. Biochem. Zool. , 79 : 411 – 423 .
   PubMedGoogle Scholar
• Liu , Y. , Li , Z. J. , Lin , Q. S. , Kosinski , J. , Seetharaman , J. , Bujnicki , J. M. , Sivaraman , J. and Hew , C. L. 2007 . Structure and evolutionary origin of Ca2+-dependent herring type II antifreeze protein . Plos ONE , 6 : e548
   Google Scholar
• Marty , G. D. , Hose , J. E. , McGurk , M. D. , Brown , E. D. and Hinton , D. E. 1997 . Histopathology and cytogenetic evaluation of Pacific herring larvae exposed to petroleum hydrocarbons in the laboratory or in Prince William Sound, Alaska, after the Exxon Valdez oil spill . Can. J. Fish. Aquat. Sci. , 54 : 1846 – 1857 .
   Web of Science ®Google Scholar
• Marty , G. D. 2008 . “ Effects of the Exxon Valdez oil spill on Pacific herring in Prince William Sound, Alaska ” . In In The toxicology of fishes , Edited by: Guiulio , R. T. and Hinton , D. E. 925 – 932 . Boca Raton, FL : CRC Press .
   Google Scholar
• Matsushita , M. , Matsushita , A. , Endo , Y. , Nakata , M. , Kojima , N. , Mizuochi , T. and Fujita , T. 2004 . Origin of the classical complement pathway: Lamprey orthologue of mammalian C1q acts as a lectin . Proc. Natl. Acad. Sci. USA , 101 : 10127 – 10131 .
   PubMedGoogle Scholar
• Meier , S. , Andersen , T. E. , Norberg , B. , Thorsen , A. , Taranger , G. L. , Kjesbu , O. S. , Dale , R. , Morton , H. C. , Klungsoyr , J. and Svardal , A. 2007 . Effects of alkylphenols on the reproductive system of Atlantic cod (Gadus morhua) . Aquat. Toxicol. , 81 : 207 – 218 .
   PubMed Web of Science ®Google Scholar
• Nelson , A. 1987 . Penetration of mercury-adsorbed phospholipid monolayers by polynuclear aromatic-hydrocarbons . Anal. Chim. Acta , 194 : 139 – 149 .
   Google Scholar
• Palace , V. P. , Klaverkamp , J. F. , Baron , C. L. and Brown , S. B. 1997 . Metabolism of 3H-retinol by lake trout (Salvelinus namaycush) pre-exposed to 3,3′,4,4′,5-pentachlorobiphenyl (PCB 126) . Aquat. Toxicol. , 39 : 321 – 332 .
   Google Scholar
• Pedersen , S. A. , Kristiansen , E. , Hansen , B. H. , Andersen , R. A. and Zachariassen , K. E. 2006 . Cold hardiness in relation to trace metal stress in the freeze-avoiding beetle Tenebrio molitor . J. Insect Physiol. , 52 : 846 – 853 .
   PubMedGoogle Scholar
• Peterson , C. H. , Rice , S. D. , Short , J. W. , Esler , D. , Bodkin , J. L. , Ballachey , B. E. and Irons , D.B. 2003 . Long-term ecosystem response to the Exxon Valdez oil spill . Science , 302 : 2082 – 2086 .
   PubMed Web of Science ®Google Scholar
• Royal Norwegian Ministry of the Environment. 2006. Integrated management of the marine environment of the Barents Sea and the sea areas off the Lofoten Islands. Report No. 8 to the Storting, 2005–2006 http://www.regjeringen.no/nb/dep/md/tema/hav-og-vannforvaltning/forvaltningsplan-barentshavet.html?id=87148 (http://www.regjeringen.no/nb/dep/md/tema/hav-og-vannforvaltning/forvaltningsplan-barentshavet.html?id=87148)
   Google Scholar
• Richards , R. C. , Achenbach , J. C. , Short , C. E. , Kimball , J. , Reith , M. E. , Driedzic , W. R. and Ewart , K. V. 2008 . Seasonal expressed sequence tags of rainbow smelt (Osmerus mordax) revealed by subtractive hybridization and the identification of two genes up-regulated during winter . Gene , 424 : 56 – 62 .
   PubMedGoogle Scholar
• Rolland , R. M. 2000 . A review of chemically-induced alterations in thyroid and vitamin A status from field studies of wildlife and fish . J. Wildl. Dis. , 36 : 615 – 635 .
   PubMed Web of Science ®Google Scholar
• Røe , T. I. 1998 . Produced water discharges to the North Sea: A study of bioavailability of organic produced water compounds to marine organisms , Trondhein, , Norway : Dr. scient. thesis, Norwegian University of Science and Technology .
   Google Scholar
• Sikkema , J. , Debont , J. A. M. and Poolman , B. 1995 . Mechanisms of membrane toxicity of hydrocarbons . Microbiol. Rev. , 59 : 201 – 222 .
   PubMedGoogle Scholar
• Suwalsky , M. , Rodriguez , C. , Villena , F. , Aguilar , F. and Sotomayor , C. P. 1998 . The organochlorine pesticide lindane interacts with the human erythrocyte membrane . Pestic. Biochem. Physiol. , 62 : 87 – 95 .
   Google Scholar
• Thorne , R. E. and Thomas , G. L. 2008 . Herring and the “Exxon Valdez” oil spill: An investigation into historical data conflicts . ICES J. Mar. Sci. , 65 : 44 – 50 .
   Web of Science ®Google Scholar
• Tomczak , M. M. , Hincha , D. K. , Estrada , S. D. , Feeney , R. E. and Crowe , J. H. 2001 . Antifreeze proteins differentially affect model membranes during freezing . Biochim. Biophys. Acta Biomembr. , 1511 : 255 – 263 .
   PubMedGoogle Scholar
• Vandesompele , J. , De Preter , K. , Pattyn , F. , Poppe , B. , Van Roy , N. , De Paepe , A. and Speleman , F. 2002 . Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes . Genome Biol. , 3 RESEARCH0034
   PubMed Web of Science ®Google Scholar
• Videira , R. A. , Antunes-Madeira , M. C. and Madeira , V. M. C. 1999 . Perturbations induced by alpha- and beta-endosulfan in lipid membranes: A DSC and fluorescence polarization study . Biochim. Biophys. Acta Biomembr. , 1419 : 151 – 163 .
   Google Scholar
• Waagbø , R. 2006 . “ Feeding and disease resistance in fish ” . In Biology of growing animals , Edited by: Mosenthin , R. , Zentek , J. and Zebrowska , T. 387 – 415 . Edinburgh : Elsevier .
   Google Scholar
• Williams , E. E. and Hazel , J. R. 1994 . “ Thermal adaptation in fish membranes: temporal resolution of adaptive mechanisms ” . In Temperature adaptation of biological membranes , Edited by: Cossins , A. R. 169 – 185 . London : Portland Press .
   Google Scholar
• Zelensky , A. N. and Gready , J. E. 2004 . C-type lectin-like domains in Fugu rubripes . BMC Genomics , 5 : 51
   PubMedGoogle Scholar