96
Views
3
CrossRef citations to date
0
Altmetric
Research Article

Mass Spectrometry and Integrated Virus Detection System Characterization of MS2 Bacteriophage

, , , , , & show all
Pages 241-254 | Received 18 Jul 2006, Accepted 29 Aug 2006, Published online: 09 Oct 2008

REFERENCES

  • Anderson G. M., Purdy W. C. Liquid chromatographic-fluorometric system for the determination of indoles in physiological samples. Anal. Chem. 1979; 51(2)283–286
  • Bothner B., Schneemann A., Marshall D., Reddy V., Johnson J. E., Siuzdak G. Crystallographically identical virus capsids display different properties in solution. Nat. Struct. Biol. 1999; 6: 114–116
  • Bussey H., Storms R. K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B., Badcock K., Benes V., Botstein D., Bowman S., Bruckner M., Carpenter J., Cherry J. M., Chung E., Churcher C., Coster F., Davis K., Davis R. W., Dietrich F. S., Delius H., DiPaolo T., Dubois E., Düsterhöft A., Duncan M., Floeth M., Fortin N., Friesen J. D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L., Hunicke-Smith S., Hyman R., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E. J., Marathe R., Messenguy F., Mewes H. W., Mirtipati S., Moestl D., Müller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F. X., Pohl T. M., Purnelle B., Rajandream M. A., Rechmann S., Rieger M., Riles L., Roberts D., Schäfer M., Scharfe M., Scherens B., Schramm S., Schröder M., Sdicu A. M., Tettelin H., Urrestaraz L. A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S. V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D. H., Hani J. The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI. Nature 1997; 387(6632 Suppl)103–105, other members of the Genome Sequencing Center
  • Cargile B. J., Mcluckey S. A., Stephenson J. L. Identification of bacteriophage MS2 coat protein from E. coli lysates via ion trap collisional activation of intact protein ions. Anal. Chem. 2001; 73: 1277–1285
  • Chong B. E., Yan F., Lubman D. M., Miller F. R. Chromatofocusing nonporous reversed-phase high-performance liquid chromatography/electrospray ionization time-of-flight mass spectrometry of proteins from human breast cancer whole cell lysates: a novel two-dimensional liquid chromatography/mass spectrometry method. J. Rapid Commun. Mass Spectrom. 2001; 15: 291–296
  • Dai Y., Li L., Roser D. C., Long S. R. Detection and identification of low-mass peptides and proteins from solvent suspensions of Escherichia coli by high performance liquid chromatography fractionation and matrix-assisted laser desorption/ionization mass spectrometry. Rapid Commun. Mass Spectrom. 1999; 13: 73–78
  • Davis J. E., Sinsheimer R. L. The replication of bacteriophage MS2. 1. Transfer of parental nucleic acid to progeny phage. J. Mol. Biol. 1963; 6: 203–207
  • Dongre A. R., Eng J., Yates J. R., III. Emerging tandem-mass-spectrometry techniques for the rapid identification of proteins. Trends Biotechnol 1997; 15: 383
  • Ember L. R. Health aftermath of chemical tests on soldiers charted. Chem. Eng. News 2001; 79: 27–32
  • Farrah S. R., Preston D. R., Toranzos G. A., Girard M., Erdos G. A., Vasuhdivan V. Use of modified diatomaceous earth for removal and recovery of viruses in water. Appl. Environ. Microbiol 1991; 57(9)2502–2506
  • Fiers W., Contreras R., Duerinck F., Haegeman G., Iserentant D., Merregaert J., Jou W. M., Molemans F., Raeymaekers A., Berghe A. V., Volckaert G., Ysebaert M. A-protein gene of bacteriophage MS2. Nature 1974; 260: 500–507
  • Fleischmann R., Adams M., White O., Clayton R., Kirkness E., Kerlavage A., Bult C., Tomb J., Dougherty B., Merrick J. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 1995; 269: 496–512
  • Fox A., Black G. E., Fox K., Rostovtseva S. J. Determination of carbohydrate profiles of Bacillus anthracis and Bacillus cereus including identification of O-methyl methylpentoses by using gas chromatography-mass spectrometry. J. Clin. Microbiol. 1993; 31: 887–896
  • Friedmann A., Shlomai J., Becker Y. Electron microscopy of herpes simplex virus DNA molecules isolated from infected cells by centrifugation in CsCl density gradients. J. Gen. Virol. 1977; 34(3)507–522
  • Henderson D. A. The looming threat of bioterrorism. Science 1999; 283: 1279–1282
  • Hu J. Y., Ong S. L., Song L. F., Feng Y. Y., Liu W. T., Tan T. W., Lee L. Y., Ng W. J. Treatability of organic fractions derived from secondary effluent by reverse osmosis membrane. Water Res. 2003; 37(19)4801–4809
  • Hurst G. B., Doktycz M. J., Vass A. A., Buchanan M. V. Detection of bacterial DNA polymerase chain reaction products by matrix-assisted laser desorption/ionization mass spectrometry. J. Rapid Commun. Mass Spectrom. 1996; 10: 377–382
  • Jensen P. K., Pasa-Tolic L., Anderson G. A., Horner J. A., Lipton M. S., Bruce. J. E., Smith R. D. Probing proteomes using capillary isoelectric focusing-electrospray ionization fourier transform ion cyclotron resonance mass spectrometry. Anal. Chem. 1999; 71: 2076–2084
  • Kachman M. T., Wang H., Schwartz D. R., Cho K. R., Lubman D. M. Differential screening and mass mapping of proteins from premalignant and cancer cell lines using nonporous reversed-phase HPLC coupled with mass spectrometric analysis. Anal. Chem. 2002; 74: 1219–1227
  • Kaneki N., Xu Y., Kumari A., Halsall H. B., Heineman W. R. Gamma-irradiation-induced grafting of poly (styrenesulfonate) to poly(tetrafluoroethylene) shielded microelectrodes. Anal. Chim. Acta 1994; 287: 253–258
  • Karty J. A., Lato S., Reilly J. P. Detection of the bacteriological sex factor in E. coli by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. J. Rapid Commun. Mass Spectrom. 1998; 12: 625–629
  • Kim Y. J., Freas A., Fenselau C. Analysis of viral glycoproteins by MALDI-TOF mass spectrometry. Anal. Chem. 1998; 70: 3863
  • Krishnamurthy T., Rajamani U., Ross P. L., Jabbour R., Nair H., Eng J., Yates J., Davis M. T., Stahl D. C., Lee T. D. Mass spectral investigations on microorganisms. J. Toxicol. Toxin Rev. 2000; 19: 95–117
  • Kuzmanovic D. A., Elashvili I., Wick C., O'Connell C., Krueger S. Bacteriophage MS2: molecular weight and spatial distribution of the protein and RNA components by small-angle neutron scattering and virus counting. Structure (Camb). 2003; 11(11)1339–1348
  • Laemmli U. K., Molbert E., Showe M., Kellenberger E. Form-determining function of the genes required for the assembly of the head of bacteriophage T4. J. Mol. Biol. 1970; 49(1)99–113
  • Maniatis T., Fritsch E. F., Sambrook J. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY 1982
  • McBride M. T., Gammon S., Pitesky M., O'Brien T. W., Smith T., Aldrich J., Langlois R. G., Colston B., Venkateswaran K. S. Multiplexed liquid arrays for simultaneous detection of simulants of biological warfare agents. Anal. Chem. 2003; 75: 1924–1930
  • Morse A. Classification of bacteria. Medical Microbiology 20th ed., E. Jawetz, J. L. Melnick. Lange Medical, London 1995; 35–43
  • Niwa O., Tabei H., Solomon B. P., Xie F., Kissinger P. T. Improved detection limit for catecholamines using liquid chromatography-electrochemistry with a carbon interdigitated array microelectrode. J. Chromatogr. B Biomed. Appl. 1995; 670(1)21–28
  • Niwa O., Xu Y., Halsall H. B., Heineman W. R. Small-volume voltammetric detection of 4-aminophenol with interdigitated array electrodes and its application to electrochemical enzyme immunoassay. Anal. Chem. 1993; 65: 1559–1563
  • Pompeia C., Ortis F., Armelin M. C. Immunopurification of polyclonal antibodies to recombinant proteins of the same gene family. Biotechniques 1996; 6: 986–988, 990
  • Rowe C. A., Tender L. M., Feldstein M. J., Golden J. P., Scruggs S. B., MacCraith B. D., Cras J. J., Ligler F. S. Array biosensor for simultaneous identification of bacterial, viral, and protein analytes. Anal. Chem. 1999; 71: 3846–3852
  • Sambrook J., Russell D. W. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY 2001
  • Scott T. M., Lukasik J., Farrah S. R. Characterization of virus adsorption by using DEAE-sepharose and octyl-sepharoser. Appl. Environ. Microbiol. 2002; 8: 3965–3968
  • Smith R. D., Loo J. A., Edmonds C. G., Baringa C. J., Udseth H. R. Bicyclization of a weak oxytocin agonist produces a highly potent oxytocin antagonist. Anal. Chem. 1990; 62: 882
  • Strauss J. H., Sinsheimer R. L. Purification and properties of bacteriophage MS2 and of its ribonucleic acid. J. Mol. Biol. 1963; 7: 43–54
  • Thomas J. J., Falk B., Fenselau C., Jackman J., Ezzell J. Viral characterization by direct analysis of capsid proteins. Anal. Chem. 1998; 70: 3863–3867
  • Thomas J. H., Kim S. K., Hesketh P. J., Halsall H. B., Heineman W. R. Bead-based electrochemical immunoassay for bacteriophage MS2. Anal. Chem. 2004; 76(10)2700–2707
  • Tito M. A., Tars K., Valegard K., Hajdu J., Robinson C. Electrospray time-of-flight mass spectrometry of the intact MS2 virus capsid. JACS. 2000; 122: 3550–3551
  • Tong W., Link A., Eng J. K., Yates J. R. Identification of proteins in complexes by solid-phase microextraction/multistep elution/capillary electrophoresis/tandem mass spectrometry. Anal. Chem. 1999; 71: 2270–2278
  • Valegard K., Liljas L., Fridborg K., Unge T. The three-dimensional structure of the bacterial virus MS2. Nature 1990; 345: 36–41
  • Wehmeyer K. R., Halsall H. B., Heineman W. R. Heterogeneous enzyme immunoassay with electrochemical detection: competitive and “sandwich”-type immunoassays. Clin. Chem. 1985; 31: 1546–1549
  • Wijayawardhana C. A., Wittstock G., Halsall H. B., Heineman W. R. Spatially addressed deposition and imaging of biochemically active bead microstructures by scanning electrochemical microscopy. Anal. Chem. 2000; 72: 333–338
  • Wick C. H., Anderson D., McCubbin P. E. Characterization of the Integrated Virus Detection System (IVDS) Using MS-2 Bacteriophage, ECBC-TR-018. May, 1997
  • Wick C. H., McCubbin P. E. Characterization of purified MS2 bacteriophage by the physical counting methodology used in the Integrated Virus Detection System (IVDS). Toxicol. Methods 1999a; 9: 245–252
  • Wick C. H., McCubbin P. E. Purification of MS2 bacterio-phage from complex growth media and resulting analysis by the Integrated Virus Detection System (IVDS). Toxicol. Methods 1999b; 9: 253–263
  • Wick C. H., McCubbin P. E., Birenzvige A. Detection and Identification of Viruses Using the Integrated Virus Detection System (IVDS), ECBC-TR-463. November, 2005
  • Yates J. R., III. Mass spectrometry and the age of the proteome. J. Mass Spectrom. 1998; 33: 1–19

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.