Exploring cotton SFR2’s conundrum in response to cold stress

References

• Quesada B, Vautard R, Yiou P. Cold waves still matter: Characteristics and associated climatic signals in Europe. Clim Change. 2023;176(6):70. doi:10.1007/s10584-023-03533-0.
   Web of Science ®Google Scholar
• Evan K, Steinhaeuser K, Ganguly AR. Persisting cold extremes under 21st-century warming scenarios. Geophys Res Lett. 2011;38(8). doi:10.1029/2011gl047103.
   Google Scholar
• Shen Q, Zhang S, Ge C, Liu S, Chen J, Liu R, Ma H, Song M, Pang C. Genome-wide association study identifies ghsal1 affects cold tolerance at the seedling emergence stage in upland cotton (gossypium hirsutum L.). Theor Appl Genet. 2023;136(2):27. doi:10.1007/s00122-023-04317-x.
   PubMed Web of Science ®Google Scholar
• Wang L, Zhao Y, Long X, Feng S, Guan X. A review of molecular regulation studies of low temperature stress in cotton. Crop Design. 2023;2(2):100039. doi:10.1016/j.cropd.2023.100039.
   Google Scholar
• Ding Y, Shi Y, Yang S. Advances and challenges in uncovering cold tolerance regulatory mechanisms in plants. New Phytol. 2019;222(4):1690–8. doi:10.1111/nph.15696.
   PubMed Web of Science ®Google Scholar
• Thomashow MF. PLANT COLD ACCLIMATION: Freezing tolerance genes and regulatory mechanisms. Annu Rev Plant Phys. 1999;50(June):571–599. doi:10.1146/annurev.arplant.50.1.571.
   Google Scholar
• Barnes AC, Benning C, Roston RL. Chloroplast membrane remodeling during freezing stress is accompanied by cytoplasmic acidification activating SENSITIVE to FREEZING2. Plant Physiol. 2016;171(3):2140–2149. doi:10.1104/pp.16.00286.
   PubMed Web of Science ®Google Scholar
• Cristina B-S, Silvestre S, Haslam RP, Michaelson LV. Lipid remodelling: unravelling the response to cold stress in arabidopsis and its extremophile relative eutrema salsugineum. Plant Sci: Int J Exp Plant Bio. 2017;263(October):194–200. doi:10.1016/j.plantsci.2017.07.017.
   Google Scholar
• Uemura M, Joseph RA, Steponkus PL. Cold acclimation of Arabidopsis thaliana (effect on plasma membrane lipid composition and freeze-induced Lesions). Plant Physiol. 1995;109(1):15–30. doi:10.1104/pp.109.1.15.
   PubMed Web of Science ®Google Scholar
• Yu L, Zhou C, Fan J, Shanklin J, Xu C. Mechanisms and functions of membrane lipid remodeling in plants. Plant J: For Cell Mol Bio. 2021;107(1):37–53. doi:10.1111/tpj.15273.
   PubMed Web of Science ®Google Scholar
• McKown R, Kuroki G, Warren G. Cold responses of arabidopsis mutants impaired in freezing tolerance. J Exp Bot. 1996;47(12):1919–1925. doi:10.1093/jxb/47.12.1919.
   Google Scholar
• Xin Z, Browse J. Eskimo1 mutants of arabidopsis are constitutively freezing-tolerant. Proc Natl Acad Sci Usa. 1998;95(13):7799–7804. doi:10.1073/pnas.95.13.7799.
   PubMed Web of Science ®Google Scholar
• Kidokoro S, Shinozaki K, Yamaguchi-Shinozaki K. Transcriptional regulatory network of plant cold-stress responses. Trends Plant Sci. 2022;27(9):922–935. doi:10.1016/j.tplants.2022.01.008.
   PubMed Web of Science ®Google Scholar
• Fourrier N, Bédard J, Lopez-Juez E, Barbrook A, Bowyer J, Jarvis P, Warren G, Thorlby G. A Role for SENSITIVE to FREEZING2 in protecting chloroplasts against freeze-induced damage in arabidopsis. Plant J: For Cell Mol Bio. 2008;55(5):734–745. doi:10.1111/j.1365-313X.2008.03549.x.
   PubMed Web of Science ®Google Scholar
• Moellering ER, Muthan B, Benning C. Freezing tolerance in plants requires lipid remodeling at the outer chloroplast membrane. Science. 2010;330(6001):226–228. doi:10.1126/science.1191803.
   PubMed Web of Science ®Google Scholar
• Roston RL, Wang K, Kuhn LA, Benning C. Structural determinants allowing transferase activity in SENSITIVE to FREEZING 2, classified as a family i glycosyl hydrolase. J Biol Chem. 2014;289(38):26089–26106. doi:10.1074/jbc.M114.576694.
   PubMed Web of Science ®Google Scholar
• Jouhet J. Importance of the hexagonal lipid phase in biological membrane organization. Front Plant Sci. 2013;4(December):494. doi:10.3389/fpls.2013.00494.
   PubMedGoogle Scholar
• Barnes AC, Myers JL, Surber SM, Liang Z, Mower JP, Schnable JC, Roston RL, Nakamura Y. Oligogalactolipid production during cold challenge is conserved in early diverging lineages. Journal Of Experimental Botany. 2023 June. 74(17):5405–5417. doi:10.1093/jxb/erad241.
   PubMed Web of Science ®Google Scholar
• Abro AA, Anwar M, Javwad MU, Zhang M, Liu F, Jiménez-Ballesta R, Salama EAA, Ahmed MAA. Morphological and physio-biochemical responses under heat stress in cotton: Overview. Biotechnol Rep. 2023;40(December):e00813. doi:10.1016/j.btre.2023.e00813.
   Google Scholar
• Majeed S, Ahmad Rana I, Salman Mubarik M, Muhammad Atif R, Tehseen Azhar M, Chung G, Jia Y, Du X, Hinze L, Azhar MT. Heat stress in cotton: a review on predicted and unpredicted growth-yield anomalies and mitigating breeding strategies. Agronomy. 2021;11(9):1825. doi:10.3390/agronomy11091825.
   Google Scholar
• Farooq MA, Shafqat Chattha W, Sohaib Shafique M, Karamat U, Tabusam J, Zulfiqar S, Shakeel A. Transgenerational impact of climatic changes on cotton production. Front Plant Sci. 2023 Mar. 14:987514. doi:10.3389/fpls.2023.987514.
   PubMed Web of Science ®Google Scholar
• Gipson JR, Joham HE. Influence of night temperature on growth and development of cotton (Gossypium Hirsutum L.) IV. Seed Quality1. Agron J. 1969;61(3):365–367. doi:10.2134/agronj1969.00021962006100030008x.
   Web of Science ®Google Scholar
• Saini DK, Impa SM, McCallister D, Patil GB, Abidi N, Glen Ritchie SYJ, Jagadish KSV, Jagadish KSV. High day and night temperatures impact on cotton yield and quality—current status and future research direction. J Cotton Res. 2023;6(1):16. doi:10.1186/s42397-023-00154-x.
   Google Scholar
• Singh B, Norvell E, Wijewardana C, Wallace T, Chastain D, Reddy KR. Assessing morphological characteristics of elite cotton lines from different breeding programmes for low temperature and drought tolerance. J Agron Crop Sci. 2018;204(5):467–476. doi:10.1111/jac.12276.
   Web of Science ®Google Scholar
• Snider JL, Thangthong N, Pilon C, Virk G, Tishchenko V. OJIP-Fluorescence parameters as rapid indicators of cotton (gossypium hirsutum l.) seedling vigor under contrasting growth temperature regimes. Plant Physiol Biochem: PPB/Soc Fr de Physiol Vegetale. 2018;132(November):249–257. doi:10.1016/j.plaphy.2018.09.015.
   PubMedGoogle Scholar
• Virk G, Snider JL, Chee P, Jespersen D, Pilon C, Rains G, Roberts P, Kaur N, Ermanis A, Tishchenko V. Extreme temperatures affect seedling growth and photosynthetic performance of advanced cotton genotypes. Ind Crops Prod. 2021;172(November):114025. doi:10.1016/j.indcrop.2021.114025.
   Google Scholar
• Gu L, Hanson PJ, Kaiser DP, Yang B, Nemani R, Pallardy SG, Meyers T, Meyers T. The 2007 Eastern US spring freeze: increased cold damage in a warming world? Bioscience. 2008;58(3):253–262. doi:10.1641/B580311.
   Web of Science ®Google Scholar
• Kargiotidou A, Deli D, Galanopoulou D, Tsaftaris A, Farmaki T. Low Temperature and light regulate delta 12 fatty acid desaturases (fad2) at a transcriptional level in cotton (Gossypium Hirsutum). J Exp Bot. 2008;59(8):2043–2056. doi:10.1093/jxb/ern065.
   PubMed Web of Science ®Google Scholar
• Christopher G, Donald N, Hashimoto K, Kudla J, Schumacher K, Blatt MR. A ubiquitin-10 promoter-based vector set for fluorescent protein tagging facilitates temporal stability and native protein distribution in transient and stable expression studies. Plant J: For Cell Mol Bio. 2010;64(2):355–365. doi:10.1111/j.1365-313X.2010.04322.x.
   PubMed Web of Science ®Google Scholar
• Clough SJ, Bent AF. Floral Dip: A simplified method for agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J: For Cell Mol Bio. 1998;16(6):735–743. doi:10.1046/j.1365-313x.1998.00343.x.
   PubMed Web of Science ®Google Scholar
• Shomo ZD, Mahboub S, Vanviratikul H, McCormick M, Tulyananda T, Roston RL, Warakanont J. All members of the arabidopsis dgat and pdat acyltransferase families operate during high and low Temperatures. Plant Physiol. 2024 Feb. 195(1):685–697. doi:10.1093/plphys/kiae074.
   PubMedGoogle Scholar
• Samira M, Zachery DS, Maxwell Regester R, Albusharif M, Rebecca LR. Three methods to extract membrane glycerolipids: comparing sensitivity to lipase degradation and yield. Methods Mol Biol. 2021;2295:15–27.
   PubMedGoogle Scholar
• Bligh EG, Dyer WJ. A rapid method of total lipid extraction and purification. Can J Biochem Physiol. 1959;37(8):911–917. doi:10.1139/y59-099.
   PubMedGoogle Scholar
• Wang Z, Benning C. Arabidopsis thaliana polar glycerolipid Profiling by Thin Layer Chromatography (TLC) Coupled with Gas-Liquid Chromatography (GLC). J Visualized Exp: JoVE. 2011 Mar. (49). doi:10.3791/2518.
   Web of Science ®Google Scholar
• Warren G, McKown R, Marin AL, Teutonico R. Isolation of mutations affecting the development of freezing tolerance in Arabidopsis thaliana (L.) heynh. Plant Physiol. 1996;111(4):1011–1019. doi:10.1104/pp.111.4.1011.
   PubMed Web of Science ®Google Scholar
• Thorlby G, Fourrier N, Warren G. The SENSITIVE to FREEZING2 gene, required for freezing tolerance in Arabidopsis thaliana, encodes a beta-glucosidase. Plant Cell. 2004;16(8):2192–2203. doi:10.1105/tpc.104.024018.
   PubMed Web of Science ®Google Scholar
• Shimamura C, Ohno R, Nakamura C, Takumi S. Improvement of freezing tolerance in tobacco plants expressing a cold-responsive and chloroplast-targeting protein WCOR15 of wheat. J Plant Physiol. 2006;163(2):213–219. doi:10.1016/j.jplph.2005.06.008.
   PubMed Web of Science ®Google Scholar
• NDong C, Danyluk J, Wilson KE, Pocock T, Huner NPA, Sarhan F. Cold-regulated cereal chloroplast late embryogenesis abundant-like proteins. molecular characterization and Functional Analyses. Plant Physiol. 2002;129(3):1368–1381. doi:10.1104/pp.001925.
   PubMed Web of Science ®Google Scholar
• Li W, Chen Y, Ye M, Lu H, Wang D, Chen Q. Evolutionary history of the c-repeat binding factor/dehydration-responsive element-binding 1 (CBF/DREB1) protein family in 43 plant species and characterization of cbf/dreb1 proteins in solanum tuberosum. BMC Evol Biol. 2020;20(1):142. doi:10.1186/s12862-020-01710-8.
   PubMed Web of Science ®Google Scholar
• Li H, Chen M, Duan L, Zhang T, Cao Y, Zhang Z. Domain swap approach reveals the critical roles of different domains of symrk in root nodule symbiosis in lotus japonicus. Front Plant Sci. 2018;9(June):697. doi:10.3389/fpls.2018.00697.
   PubMedGoogle Scholar
• Wulff BB, Thomas CM, Smoker M, Grant M, Jones JD. Domain swapping and gene shuffling identify sequences required for induction of an avr-dependent hypersensitive response by the tomato Cf-4 and Cf-9 proteins. Plant Cell. 2001;13(2):255–272. doi:10.1105/tpc.13.2.255.
   PubMed Web of Science ®Google Scholar
• Wang K, Lynn Hersh H, Benning C. SENSITIVE to FREEZING2 aids in resilience to salt and drought in freezing-sensitive tomato. Plant Physiol. 2016;172(3):1432–1442. doi:10.1104/pp.16.01183.
   PubMed Web of Science ®Google Scholar
• Gasulla F, Vom Dorp K, Dombrink I, Zähringer U, Gisch N, Dörmann P, Bartels D. The Role of lipid metabolism in the acquisition of desiccation tolerance in craterostigma plantagineum: a comparative approach. Plant J: For Cell Mol Bio. 2013;75(5):726–741. doi:10.1111/tpj.12241.
   PubMed Web of Science ®Google Scholar
• National Cotton Council of America. The story of cotton: where cotton grows. n.d [Accessed 2024 Mar 5]. https://www.cotton.org/pubs/cottoncounts/story/where.cfm#:~:text=Cotton%20Cotton%20grows%20in%20warm,are%20Brazil%2C%20Pakistan%20and%20Turkey.
   Google Scholar