References
- Ali ME, Razzak MA, Hamid SBA. 2014. Multiplex PCR in species authentication: probability and prospects—a review. Food Anal Methods. 7(10):1933–1949. https://doi.org/https://doi.org/10.1007/s12161-014-9844-4
- Andreoletti O, Budka H, Buncic S, Colin P, Collins JD, Koeijer A, De Griffin J, Havelaar A, Hope J, Klein G, et al. 2007. Opinion of the scientific panel on biological hazards on a request from the European Parliament on the assessment of the health risks of feeding of ruminants with fishmeal in relation to the risk of TSE. EFSA J. 443:1–26.
- Chen R, Gao XB, Mei MZ, Duan YY, Liu ZL, Weng WC, Yang J. 2019. A novel multiplex xMAP assay for generic detection of avian, fish, and ruminant DNA in feed and feedstuffs. Appl Microbiol Biotechnol. 103(11):4575–4584. https://doi.org/https://doi.org/10.1007/s00253-019-09833-9
- Chiş L-M, Vodnar DC. 2019. Detection of the species of origin for pork, chicken and beef in meat food products by real-time PCR. Safety. 5(4):83. https://doi.org/https://doi.org/10.3390/safety5040083
- Das HK, Hattula MT, Myllymäki OM, Mälkki Y. 1993. Effects of formulation and processing variables on dry fish feed pellets containing fish waste. J Sci Food Agric. 61(2):181–187. https://doi.org/https://doi.org/10.1002/jsfa.2740610208
- Department of Chemistry. 2020. Detection of porcine DNA in chicken. Jakarta (Indonesia): KIMIA PT.
- Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics. 26(19):2460–2461. https://doi.org/https://doi.org/10.1093/bioinformatics/btq461
- Edgar RC. 2016. SINTAX: a simple non-Bayesian taxonomy classifier for 16S and ITS sequences. BioRxiv. 074161; https://doi.org/https://doi.org/10.1101/074161
- Espiñeira M, González-Lavín N, Vieites JM, Santaclara FJ. 2008. Authentication of anglerfish species (Lophius spp) by means of polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) and forensically informative nucleotide sequencing (FINS) methodologies. J Agric Food Chem. 56(22):10594–10599. https://doi.org/https://doi.org/10.1021/jf801728q
- Frezza D, Giambra V, Chegdani F, Fontana C, Maccabiani G, Losio N, Faggionato E, Chiappini B, Vaccari G, von Holst C, et al. 2008. Standard and light-cycler PCR methods for animal DNA species detection in animal feedstuffs. Innov Food Sci Emerg Technol. 9(1):18–23. https://doi.org/https://doi.org/10.1016/j.ifset.2007.04.008
- Fumière O, Dubois M, Baeten V, Von Holst C, Berben G. 2006. Effective PCR detection of animal species in highly processed animal byproducts and compound feeds. Anal Bioanal Chem. 385(6):1045–1054. https://doi.org/https://doi.org/10.1007/s00216-006-0533-z
- Hołda K, Natonek-Wiśniewska M, Krzyścin P, Głogowski R. 2018. Qualitative and quantitative detection of chicken deoxyribonucleic acid (DNA) in dry dog foods. J Anim Physiol Anim Nutr. 102:37–42. https://doi.org/https://doi.org/10.1111/jpn.12887
- Horvath-Ungerboeck C, Widmann K, Handl S. 2017. Detection of DNA from undeclared animal species in commercial elimination diets for dogs using PCR. Vet Dermatol. 28(4):373–386. https://doi.org/https://doi.org/10.1111/vde.12431
- Jedrejek D, Levic J, Wallaca J, Oleszek W. 2016. Animal by-products for feed: characteristics, European regulatory framework, and 2 potential impacts on human and animal health and the environment. J Animal Feed Sci. 26(3):189–202. https://doi.org/https://doi.org/10.22358/jafs/65548/2016
- Krcmar P, Rencova E. 2005. Quantitative detection of species-specific DNA in feedstuffs and fish meals. J Food Prot. 68(6):1217–1221. https://doi.org/https://doi.org/10.4315/0362-028X-68.6.1217
- Latif AA, Osman G. 2017. Comparison of three genomic DNA extraction methods to obtain high DNA quality from maize. Plant Meth. 13:1–9. https://doi.org/https://doi.org/10.1186/s13007-016-0152-4
- Li MH. 1998. Feed formulation and processing. In: Lovell T, editor. Nutrition and Feeding of Fish. Boston, MA: Springer. https://doi.org/https://doi.org/10.1007/978-1-4615-4909-3_8
- Lunestad BT, Nesse L, Lassen J, Svihus B, Nesbakken T, Fossum K, Rosnes JT, Kruse H, Yazdankhah S. 2007. Salmonella in fish feed; occurrence and implications for fish and human health in Norway. Aquaculture. 265(1–4):1–8. https://doi.org/https://doi.org/10.1016/j.aquaculture.2007.02.011
- Machida R, Leray M, Ho SL. et al. 2017. Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples. Sci Data. 4:170027. https://doi.org/https://doi.org/10.1038/sdata.2017.27
- Marcel M. 2011. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet.journal. 17:10–12. https://doi.org/https://doi.org/10.14806/ej.17.1.200
- Nesic K, Pavlovic N, Pavlovic M, Tasic A, Kureljusic J, Rokvic N, Radosavljevic V. 2019. Testing animal feed for the presence of ruminant DNA using the official real-time PCR method. IOP Conf Ser: Earth Environ Sci. 333(1):012086. https://doi.org/https://doi.org/10.1088/1755-1315/333/1/012086
- Pegels N, González I, López-Calleja I, Fernández S, García T, Martín R. 2012. Evaluation of a TaqMan real-time PCR assay for detection of chicken, turkey, duck, and goose material in highly processed industrial feed samples. Poult Sci. 91(7):1709–1719. https://doi.org/https://doi.org/10.3382/ps.2011-01954
- Riudavets J, Lucas É, José Pons M. 2002. Insects and mites of stored products in northeast of Spain. Bull OILB/SROP. 25(3):41–44.
- Safdar M, Junejo Y. 2015. Development and validation of fast duplex real-time PCR assays based on SYBER green florescence for detection of bovine and poultry origins in feedstuffs. Food Chem. 173:660–664. https://doi.org/https://doi.org/10.1016/j.foodchem.2014.10.088
- Saidin N, Rahman FA. 2016. Halal feed for halal food: an exploratory study of the Malaysian legal and regulatory framework on animal feed. In: Manan SKA, Rahman FA, Sahri M, editors. Contemporary issues and development in the global halal industry. Amsterdam (The Netherlands): Springer; p. 141–151. https://doi.org/https://doi.org/10.1007/978-981-10-1452-9_13
- Sarri C, Stamatis C, Sarafidou T, Galara I, Godosopoulos V, Kolovos M, Liakou C, Tastsoglou S, Mamuris Z. 2014. A new set of 16S rRNA universal primers for identification of animal species. Food Control. 43:35–41. https://doi.org/https://doi.org/10.1016/j.foodcont.2014.02.036
- Shepherd CJ, Jackson AJ. 2013. Global fishmeal and fish-oil supply: inputs, outputs and markets. J Fish Biol. 83(4):1021–1046. https://doi.org/https://doi.org/10.1111/jfb.12224
- Steinhilber AE, Schmidt FF, Naboulsi W, Planatscher H, Niedzwiecka A, Zagon J, Braeuning A, Lampen A, Joos TO, Poetz O. 2018. Species differentiation and quantification of processed animal proteins and blood products in fish feed using an 8-plex mass spectrometry-based immunoassay. J Agric Food Chem. 66(39):10327–10335. https://doi.org/https://doi.org/10.1021/acs.jafc.8b03934
- Tacon AGJ, Hasan MR, Metian M. 2011. Demand and supply of feed ingredients for farmed fish and crustaceans: trends and prospects. In: FAO fisheries and aquaculture technical paper. Vol. 564. Rome (Italy): Food and Agriculture Organization.
- Tacon AGJ, Metian M. 2015. Feed matters: satisfying the feed demand of aquaculture. Rev Fish Sci Aquac. 23(1):1–10. https://doi.org/https://doi.org/10.1080/23308249.2014.987209
- Xing RR, Wang N, Hu RR, Zhang JK, Han JX, Chen Y. 2019. Application of next generation sequencing for species identification in meat and poultry products: a DNA metabarcoding approach. Food Control. 101:173–179. https://doi.org/https://doi.org/10.1016/j.foodcont.2019.02.034
- Zia Q, Alawami M, Fadhilah N, Mokhtar K, Mohd R, Raja H, Hanish I, Mind AN, Shati A, Qatif A, et al. 2020. Current analytical methods for porcine identification in meat and meat products. Food Chem. 324:126664. https://doi.org/https://doi.org/10.1016/j.foodchem.2020.126664