Identification of Clonostachys and Trichoderma spp. from banana fruit surfaces by cultural, morphological and molecular methods

References

• Alvindia , DG and Natsuaki , KT. 2008 . Evaluation of fungal epiphytes isolated from banana fruit surfaces for biocontrol of banana crown rot disease . Crop Prot , 27 : 1200 – 1207 .
   Web of Science ®Google Scholar
• Alvindia , DG , Kobayashi , T , Yaguchi , Y and Natsuaki , KT. 2000 . Symptoms and the associated fungi of postharvest diseases on non-chemical bananas imported from the Philippines . Jpn J Trop Agric. , 44 : 87 – 93 .
   Google Scholar
• Alvindia , DG , Kobayashi , T , Yaguchi , Y and Natsuaki , KT. 2002 . Pathogenicity of fungi isolated from non-chemical bananas . Jpn J Trop Agric. , 44 : 215 – 223 .
   Google Scholar
• Batta , YA. 2007 . Control of postharvest diseases of fruit with an invert emulsion formulation of Trichoderma harzianum Rifai . Postharv Biol Technol. , 43 : 143 – 150 .
   Web of Science ®Google Scholar
• Burgess , DR , Bretag , T and Keane , PJ. 1997 . Biocontrol of seedborne Botrytis cinerea in chickpea with Gliocladium roseum . Plant Pathol. , 46 : 298 – 305 .
   Web of Science ®Google Scholar
• Chaverri , P and Samuels , GJ. 2004 . Hypocrea/Trichoderma (Ascomycota, Hypocreales, Hypocreaceae): Species with green ascospores . Stud Mycol. , 48 : 1 – 116 .
   Google Scholar
• Elad , Y , Chet , I and Katan , J. 1980 . Trichoderma harzianum: a biocontrol agent against Sclerotium rolfsii and Rhizoctonia solani . Phytopathology , 70 : 119 – 121 .
   Web of Science ®Google Scholar
• Finlay , AR and Brown , EA. 1993 . The relative importance of Colletotrichum musae as a crown rot pathogen on Windward Island bananas . Plant Pathol. , 40 : 568 – 575 .
   Google Scholar
• Gams , W and Bissett , J. 1998 . “ Morphology and identification of Trichoderma ” . In Trichoderma and Gliocladium , Edited by: Kubicek , CP , Harman , GE. and Editors . Vol. 1 , 1 – 34 . London : Taylor and Francis .
   Google Scholar
• Gams , W and Meyer , W. 1998 . What exactly is Trichoderma harzianum? . Mycologia , 90 : 904 – 915 .
   Web of Science ®Google Scholar
• Harman , GE and Stasz , TE. 1989 . Combining effective strains of Trichoderma harzianum and solid matrix priming to provide improved biological seed treatment systems . Plant Dis. , 72 : 631 – 637 .
   Google Scholar
• Hermosa , M , Grondona , I , Iturriaga , E.A , Diaz-Minguez , JM , Castro , C , Monte , E and Garcia-Acha , I. 2000 . Molecular characterization and identification of biocontrol isolates of Trichoderma spp . Appl Environ Microbiol. , 66 : 1890 – 1898 .
   PubMed Web of Science ®Google Scholar
• Hirata , T , Kimishima , E , Aoki , T , Nirenberg , HI and O'Donnell , K. 2001 . Morphological and molecular characterization of Fusarium verticillioides from rotten banana imported into Japan . Mycoscience , 42 : 155 – 166 .
   Google Scholar
• Hjeljord , LG and Tronsmo , A. 1998 . “ Trichoderma and Gliocladium in biological control: an overview ” . In Trichoderma and Gliocladium: Enzymes, Biological Control and Commercial Application , Edited by: Harman , GE and Kubicek , CP. Vol. 2 , 131 – 151 . London : Taylor & Francis .
   Google Scholar
• Howell , CR. 1987 . Relevance of mycoparasitism in the biological control of Rhizoctonia solani by Gliocladium virens . Phytopathology , 77 : 992 – 994 .
   Web of Science ®Google Scholar
• Howell , CR. 2003 . Mechanisms employed by Trichoderma species in the biological control of plant diseases: The history and evolution of current concepts . Plant Dis. , 87 : 1 – 10 .
   Google Scholar
• Howell , CR. 2002 . Cotton seedling preemergence damping-off incited by Rhizopus oryzae and Pythium spp. and its biological control with Trichoderma spp . J Phytopathol. , 92 : 177 – 180 .
   Google Scholar
• Janisiewicz , WJ , Peterson , DL and Bors , R. 1994 . Control of storage rots of apples with Sporobolomyces roseus . Plant Dis. , 78 : 466 – 470 .
   Web of Science ®Google Scholar
• Jensen , DF , Knudsen , IMB , Lübeck , M , Mamarabadi , M , Hockenhull , J and Jensen , B. 2007 . Development of a biocontrol agent for plant disease control with special emphasis on the near commercial fungal antagonist Clonostachys rosea strain ‘IK726’ . Australas Plant Pathol. , 36 : 95 – 101 .
   Google Scholar
• Jimenez , M , Logrieco , A and Bottalico , A. 1993 . Occurrence and pathogenicity of Fusarium species in banana fruits . J Phytopathol. , 137 : 214 – 220 .
   Web of Science ®Google Scholar
• Johanson , A and Blazquez , B. 1992 . Fungi associated with banana crown rot on field packed fruit from the Windward Islands and assessment of their sensitivity to fungicides thiabendazole, procloraz and imazalil . Crop Prot. , 11 : 79 – 83 .
   Web of Science ®Google Scholar
• Keinath , AP , Fravel , DR and Papavizas , GC. 1991 . Potential of Gliocladium roseum for biocontrol of Verticillium dahliae . J Phytopathol. , 81 : 644 – 648 .
   Google Scholar
• Knight , C , Cutts , DF and Colhoun , J. 1977 . The role of Fusarium semitectum in causing crown rot of bananas . Phytopathol Z. , 89 : 170 – 176 .
   Google Scholar
• Knudsen , IMB , Hockenhull , J and Jensen , DF. 1995 . Biocontrol of seedling diseases of barley and wheat caused by Fusarium culmorum and Bipolaris sorokiniana: effects of selected fungal antagonists on growth and yield components . Plant Pathol. , 44 : 467 – 477 .
   Web of Science ®Google Scholar
• Kornerup , A and Wanscher , JH. 1978 . Methuen handbook of colour , 252 London : Eyre Methuen. p .
   Google Scholar
• Krauss , U and Johanson , A. 2000 . Recent advances in the control of crown rot of banana in the Windward Islands . Crop Prot. , 19 : 151 – 160 .
   Web of Science ®Google Scholar
• Krauss , U and Soberanis , W. 2001 . Biocontrol of cocoa pod diseases with mycoparasite mixtures . Biol Control , 22 : 149 – 158 .
   Web of Science ®Google Scholar
• Krauss , U , Bidwell , R and Ince , J. 1998 . Isolation and preliminary evaluation of mycoparasites as biocontrol agents of crown rot of banana . Biol Control , 13 : 111 – 119 .
   Google Scholar
• Martijn ten Hoopen , G , Crozier , J , Buddie , A , Flood , J , Astorga , C and Krauss , U. 2006 . “ Genetic population and structure of Clonostachys byssicola and genetic diseases resistance in cocoa (Theobroma cacao L.) ” . In International Permanent Working Group for Cocoa Pests and Diseases, Costa Rica (abstract only)
   Google Scholar
• Moody , AR and Gindrat , D. 1977 . Biological control of cucumber black root rot by Gliocladium roseum . J Phytopathol. , 67 : 1159 – 1162 .
   Google Scholar
• O'Donnell , K and Cigelnik , E. 1997 . Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous . Mol Phylogenet Evol. , 7 : 103 – 116 .
   PubMed Web of Science ®Google Scholar
• O'Donnell , K , Cigelnik , E , Weber , NJ and Trappe , JM. 1997 . Phylogenetic relationships among ascomycetous truffles and the true and false morels inferred from 18S and 28S ribosomal DNA sequence analysis . Mycologia , 89 : 48 – 65 .
   Web of Science ®Google Scholar
• Ogawa , JM. 1970 . Postharvest diseases of bananas in China (Taiwan) . FAO Plant Prot Bull. , 18 : 31 – 42 .
   Google Scholar
• Papavivaz , GC. 1985 . Trichoderma and Gliocladium: Biology, ecology, and potential for biocontrol . Annu Rev Phytopathol. , 23 : 23 – 54 .
   Google Scholar
• Saito , N and Nei , M. 1987 . The neighbor-joining method: a new method for reconstructing phylogenetic trees . Mycol Biol Evol. , 4 : 406 – 425 .
   PubMed Web of Science ®Google Scholar
• Samuels , GJ. 2006 . Trichoderma: Systematics, the sexual state, and ecology . J Phytopathol. , 96 : 195 – 206 .
   Google Scholar
• Sant , D , Casanova , E , Segarra , G , Avilés , M , Reis , M and Trillas , MI. 2010 . Effect of Trichoderma asperellum strain T34 on Fusarium wilt and water usage in carnation grown on compost-based growth medium . Biol Control , 53 : 291 – 296 .
   Web of Science ®Google Scholar
• Schroers , HJ. 2001 . A monograph of Bionectria (Ascomycota, Hypocreales, Bionectriaceae) and its Clonostachys anamorphs . Stud Mycol. , 46 : 1 – 214 .
   Google Scholar
• Sivapalan , A. 1993 . Fungi associated with broccoli seed and evaluation of fungal antagonists and fungicides for the control of seed-borne Alternaria brassicicola . Seed Sci Technol. , 21 : 237 – 245 .
   Google Scholar
• Sutton , JC , Li , DW , Peng , G , Yu , H , Zhang , PG and Valdebenito-Sanhueza , RM. 1997 . Gliocladium roseum: A versatile adversary of Botrytis cinerea in crops . Plant Dis. , 81 : 316 – 328 .
   PubMed Web of Science ®Google Scholar
• Ten Hoopen , GM , Rees , R , Aisa , P , Stirrup , T and Krauss , U. 2003 . Population dynamics of epiphytic mycoparasites of the genera Clonostachys and Fusarium for the biocontrol of black pod (Phytophthora palmivora) and moniliasis (Moniliophthora roreri) on cocoa (Theobroma cacao) . Mycol Res. , 107 : 587 – 596 .
   PubMed Web of Science ®Google Scholar
• Thompson , JD , Higgins , DG and Gibson , TJ. 1994 . Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice . Nucleic Acid Res. , 22 : 4673 – 4680 .
   PubMed Web of Science ®Google Scholar
• Verma , M , Brar , SK , Tyagi , RD , Surampally , RY and Valéro , JR. 2007 . Antagonistic fungi, Trichoderma spp.: panoply of biological control . J Biochem Eng. , 37 : 1 – 20 .
   Google Scholar
• White , TJ , Bruns , T , Lee , S and Taylor , J. 1990 . “ Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics ” . In PCR Protocols , Edited by: Innis , MA , Gelfand , DH , Sninsky , JJ and White , TJ. 315 – 322 . A guide to methods and applications, San Diego : Academic Press .
   Google Scholar