MiR-140 inhibits classical swine fever virus replication by targeting Rab25 in swine umbilical vein endothelial cells

References

• Heinz FX, Stiasny K, Allison SL. The entry machinery of flaviviruses. In: Calisher CH, Griffin DE, editors. Emergence and control of zoonotic viral encephalitides. Vienna: Springer Vienna; 2004. p. 133–137.
   Google Scholar
• Agarwal R, Jurisica I, Mills GB, et al. The emerging role of the RAB25 small GTPase in cancer. Traffic. 2009;10:1561.
   PubMed Web of Science ®Google Scholar
• Bos JL, Rehmann H, Wittinghofer A. GEFs and GAPs: critical elements in the control of small G proteins. Cell. 2007;129:865–877.
   PubMed Web of Science ®Google Scholar
• Stenmark H. Rab GTPases as coordinators of vesicle traffic. Nat Rev Mol Cell Biol. 2009;10:513–525.
   PubMed Web of Science ®Google Scholar
• Tzaban S, Rhyen M. The recycling and transcytotic pathways for IgG transport by FcRn are distinct and display an inherent polarity. J Cell Biol. 2009;185:673.
   PubMed Web of Science ®Google Scholar
• Wang S, Hu C, Wu F, et al. Rab25 GTPase: functional roles in cancer. Oncotarget. 2017;8:64591–64599.
   PubMedGoogle Scholar
• Ambros V. The functions of animal microRNAs. Nature. 2004;431:350–355.
   PubMed Web of Science ®Google Scholar
• Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004;116:281–297.
   PubMed Web of Science ®Google Scholar
• Li Y, Shi X. MicroRNAs in the regulation of TLR and RIG-I pathways. Cell Mol Immunol. 2013;10:65–71.
   PubMed Web of Science ®Google Scholar
• Lau NC, Lim LP, Weinstein EG, et al. An abundant class of tiny RNAs with probable regulatory roles in C. elegans. Science. 2001;294:858–862.
   PubMed Web of Science ®Google Scholar
• Jonesrhoades MW, Bartel DP, Bartel B. microRNAs and their regulatory roles in plants. Annu Rev Plant Biol. 2006;57:19–53.
   PubMed Web of Science ®Google Scholar
• Wienholds E, Kloosterman WP, Miska E, et al. MicroRNA expression in zebrafish embryonic development. Science. 2005;309:310–311.
   PubMed Web of Science ®Google Scholar
• Bartel DP. Metazoan MicroRNAs. Cell. 2018;173:20–51.
   PubMed Web of Science ®Google Scholar
• Fromm B, Billipp T, Peck LE, et al. A uniform system for the annotation of vertebrate microRNA genes and the evolution of the human microRNAome. Annu Rev Genet. 2015;49:213–242.
   PubMed Web of Science ®Google Scholar
• Gottwein E, Cullen BR. Viral and cellular microRNAs as determinants of viral pathogenesis and immunity. Cell Host Microbe. 2008;3:375–387.
   PubMed Web of Science ®Google Scholar
• Triboulet R, Mari B, Lin YL, et al. Suppression of microRNA-silencing pathway by HIV-1 during virus replication. Science. 2007;315:1579–1582.
   PubMed Web of Science ®Google Scholar
• Reinhart BJ, Slack FJ, Basson M, et al. The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans. Nature. 2000;403:901–906.
   PubMed Web of Science ®Google Scholar
• Benderska N, Dittrich AL, Knaup S, et al. miRNA-26b overexpression in ulcerative colitis-associated carcinogenesis. Inflamm Bowel Dis. 2015;21:2039–2051.
   PubMed Web of Science ®Google Scholar
• Cummins JM, He Y, Leary RJ, et al. The colorectal microRNAome. Proc Natl Acad Sci U S A. 2006;103:3687–3692.
   PubMed Web of Science ®Google Scholar
• Xiao S, Wang X, Ni H, et al. MicroRNA miR-24-3p promotes porcine reproductive and respiratory syndrome virus replication through suppression of heme oxygenase-1 expression. J Virol. 2015;89:4494–4503.
   PubMed Web of Science ®Google Scholar
• Chen D, ZHANG Y-M, ZHANG Q, et al. A microRNA catalog of swine umbilical vein endothelial cells identified by deep sequencing. Agricul Sci China. 2011;10:1467–1474.
   Google Scholar
• Dai C Construction of report gene with untranslation region sequences of CSFV and screening of 3ʹ TUR sequences subclone (In Chinese) [Thesis for Masters Degree]. Northwest A & F University; 2009.
   Google Scholar
• Hong HX, Zhang YM, Xu H, et al. Immortalization of swine umbilical vein endothelial cells with human telomerase reverse transcriptase. Mol Cells. 2007;24:358–363.
   PubMed Web of Science ®Google Scholar
• Lv H, Dong W, Guo K, et al. Tumor necrosis factor receptor-associated factor 5 interacts with the NS3 protein and promotes classical swine fever virus replication. Viruses. 2018;10:6.
   Web of Science ®Google Scholar
• Qian G, Lv H, Lin J, et al. FHC, an NS4B-interacting protein, enhances classical swine fever virus propagation and acts positively in viral anti-apoptosis. Sci Rep. 2018;8:8318.
   PubMed Web of Science ®Google Scholar
• Pasquinelli AE, Reinhart BJ, Slack F, et al. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA. Nature. 2000;408:86–89.
   PubMed Web of Science ®Google Scholar
• Sodroski C, Lowey B, Hertz L, et al. MicroRNA-135a modulates hepatitis C virus genome replication through downregulation of host antiviral factors. Virol Sin. 2019;34:197–210
   PubMed Web of Science ®Google Scholar
• Liu F, Wang H, Du L, et al. Feng W-h. MicroRNA-30c targets the interferon–alpha/beta receptor beta chain to promote type 2 PRRSV infection. J Gen Virol. 2018;99:1671–1680
   Web of Science ®Google Scholar
• Zhang P, Wang L, Li Y, et al. Identification and characterization of microRNA in the lung tissue of pigs with different susceptibilities to PCV2 infection. Vet Res. 2018;49:18.
   PubMed Web of Science ®Google Scholar
• Bree JD, Laevens H, Jong MCMD. Within- and between-pen transmission of classical swine fever virus: a new method to estimate the basic reproduction ratio from transmission experiments. Epidemiol Infect. 2002;128:293–299.
   PubMed Web of Science ®Google Scholar
• Summerfield A, Knötig SM, Mccullough KC. Lymphocyte apoptosis during classical swine fever: implication of activation-induced cell death. J Virol. 1998;72:1853.
   PubMed Web of Science ®Google Scholar
• Summerfield A, Knoetig SM, Tschudin R, et al. Pathogenesis of granulocytopenia and bone marrow atrophy during classical swine fever involves apoptosis and necrosis of uninfected cells. Virology. 2000;272:50.
   PubMed Web of Science ®Google Scholar
• Dai P, Wang W, Cao H, et al. Modified vaccinia virus Ankara triggers type I IFN production in murine conventional dendritic cells via a cGAS/STING-mediated cytosolic DNA-sensing pathway. PLoS Pathog. 2014;10:e1003989.
   PubMed Web of Science ®Google Scholar
• Nicolas FE, Pais H, Schwach F, et al. Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140. RNA. 2008;14:2513–2520.
   PubMed Web of Science ®Google Scholar
• Pais H, Nicolas FE, Soond SM, et al. Analyzing mRNA expression identifies Smad3 as a microRNA-140 target regulated only at protein level. RNA. 2010;16:489–494.
   PubMed Web of Science ®Google Scholar
• Takata A, Otsuka M, Yoshikawa T, et al. MicroRNA-140 acts as a liver tumor suppressor by controlling NF-κB activity by directly targeting DNA methyltransferase 1 (Dnmt1) expression. Hepatology. 2013;57:162–170.
   PubMed Web of Science ®Google Scholar
• Takata A, Otsuka M, Kojima K, et al. MicroRNA-22 and microRNA-140 suppress NF-κB activity by regulating the expression of NF-κB coactivators. Biochem Biophys Res Commun. 2011;411:826–831.
   PubMed Web of Science ®Google Scholar
• Lin J, Wang C, Liang W, et al. Rab1A is required for assembly of classical swine fever virus particle. Virology. 2018;514:18–29.
   PubMed Web of Science ®Google Scholar
• Liang W, Zheng M, Bao C, et al. CSFV proliferation is associated with GBF1 and Rab2. J Biosci. 2017;42:43–56.
   PubMed Web of Science ®Google Scholar
• Lin J, Wang C, Zhang L, et al. Rab5 enhances classical swine fever virus proliferation and interacts with viral NS4B protein to facilitate formation of NS4B related complex. Front Microbiol. 2017;8:1468
   PubMed Web of Science ®Google Scholar
• Welz T, Wellbourne-Wood J, Kerkhoff E. Orchestration of cell surface proteins by Rab11. Trends Cell Biol. 2014;24:407–415.
   PubMed Web of Science ®Google Scholar