Infection status and circulating strains of rotaviruses in Chinese children younger than 5-years old from 2011 to 2018: systematic review and meta-analysis

References

• Tate JE, Burton AH, Boschi-Pinto C, Steele AD, Duque J, Parashar UD. 2008 estimate of worldwide rotavirus-associated mortality in children younger than 5 years before the introduction of universal rotavirus vaccination programmes: a systematic review and meta-analysis. Lancet Infect Dis. 2012;12:136–41.
   PubMed Web of Science ®Google Scholar
• Tate JE, Burton AH, Boschi-Pinto C, Parashar UD. Global, regional, and national estimates of rotavirus mortality in children <5 years of age, 2000-2013. Clin Infect Dis. 2016;62:S96–s105.
   PubMed Web of Science ®Google Scholar
• Liu N, Xu Z, Li D, Zhang Q, Wang H, Duan ZJ. Update on the disease burden and circulating strains of rotavirus in China: a systematic review and meta-analysis. Vaccine. 2014;32:4369–75. doi:10.1016/j.vaccine.2014.06.018.
   PubMed Web of Science ®Google Scholar
• Kawai K, O’Brien MA, Goveia MG, Mast TC, El Khoury AC. Burden of rotavirus gastroenteritis and distribution of rotavirus strains in Asia: a systematic review. Vaccine. 2012;30:1244–54. doi:10.1016/j.vaccine.2011.12.092.
   PubMed Web of Science ®Google Scholar
• Liu X, Meng L, Li J, Liu X, Bai Y, Yu D, Ren X, Liu H, Shen X, Wang P, et al. Etiological epidemiology of viral diarrhea on the basis of sentinel surveillance in children younger than 5 years in Gansu, northwest China, 2009-2013. J Med Virol. 2015;87:2048–53. doi:10.1002/jmv.24283.
   PubMed Web of Science ®Google Scholar
• Lou JT, Xu XJ, Wu YD, Tao R, Tong MQ. Epidemiology and burden of rotavirus infection among children in Hangzhou, China. J Clin Virol. 2011;50:84–87. doi:10.1016/j.jcv.2010.10.003.
   PubMed Web of Science ®Google Scholar
• Yu J, Lai S, Geng Q, Ye C, Zhang Z, Zheng Y, Wang L, Duan Z, Zhang J, Wu S, et al. Prevalence of rotavirus and rapid changes in circulating rotavirus strains among children with acute diarrhea in China, 2009-2015. J Infect. 2019;78:66–74. doi:10.1016/j.jinf.2018.07.004.
   PubMed Web of Science ®Google Scholar
• Linhares AC, Stupka JA, Ciapponi A, Bardach AE, Glujovsky D, Aruj PK, Mazzoni A, Rodriguez JA, Rearte A, Lanzieri TM, et al. Burden and typing of rotavirus group A in Latin America and the Caribbean: systematic review and meta-analysis. Rev Med Virol. 2011;21:89–109.
   PubMed Web of Science ®Google Scholar
• White RG, Hakim AJ, Salganik MJ, Spiller MW, Johnston LG, Kerr L, Kendall C, Drake A, Wilson D, Orroth K, et al. Strengthening the reporting of observational studies in epidemiology for respondent-driven sampling studies: “STROBE-RDS” statement. J Clin Epidemiol. 2015;68:1463–71. doi:10.1016/j.jclinepi.2015.04.002.
   PubMed Web of Science ®Google Scholar
• Fowkes FG, Fulton PM. Critical appraisal of published research: introductory guidelines. BMJ. 1991;302:1136–40. doi:10.1136/bmj.302.6785.1136.
   PubMed Web of Science ®Google Scholar
• Sanderson S, Tatt ID, Higgins JP. Tools for assessing quality and susceptibility to bias in observational studies in epidemiology: a systematic review and annotated bibliography. Int J Epidemiol. 2007;36:666–76.
   PubMed Web of Science ®Google Scholar
• Parashar UD, Gibson CJ, Bresee JS, Glass RI. Rotavirus and severe childhood diarrhea. Emerg Infect Dis. 2006;12:304–06. doi:10.3201/eid1202.050006.
   PubMed Web of Science ®Google Scholar
• World Health Organization. Rotavirus vaccines. WHO position paper – January 2013. Weekly epidemiological record. 2013;88:49–64.
   Google Scholar
• Wang FT, Mast TC, Glass RJ, Loughlin J, Seeger JD. Effectiveness of the pentavalent rotavirus vaccine in preventing gastroenteritis in the United States. Pediatrics. 2010;125:e208–213. doi:10.1542/peds.2009-1246.
   PubMed Web of Science ®Google Scholar
• Hemming-Harlo M, Markkula J, Huhti L, Salminen M, Vesikari T. Decrease of rotavirus gastroenteritis to a low level without resurgence for five years after universal rotateq vaccination in Finland. Pediatr Infect Dis J. 2016;35:1304–08. doi:10.1097/INF.0000000000001305.
   PubMed Web of Science ®Google Scholar
• Clarke MF, Davidson GP, Gold MS, Marshall HS. Direct and indirect impact on rotavirus positive and all-cause gastroenteritis hospitalisations in South Australian children following the introduction of rotavirus vaccination. Vaccine. 2011;29:4663–67. doi:10.1016/j.vaccine.2011.04.109.
   PubMed Web of Science ®Google Scholar
• Chang WC, Yen C, Wu FT, Huang YC, Lin JS, Huang FC, Yu HT, Chi CL, Lin HY, Tate JE, et al. Effectiveness of 2 rotavirus vaccines against rotavirus disease in Taiwanese infants. Pediatr Infect Dis J. 2014;33:e81–86.
   PubMed Web of Science ®Google Scholar
• Gong XH, Wu HY, Li J, Xiao WJ, Zhang X, Chen M, Teng Z, Pan H, Yuan ZA. Epidemiology, aetiology and seasonality of infectious diarrhoea in adult outpatients through active surveillance in Shanghai, China, 2012-2016: a cross-sectional study. BMJ Open. 2018;8:e019699. doi:10.1136/bmjopen-2017-019699.
   PubMed Web of Science ®Google Scholar
• Fu C, He Q, Xu J, Xie H, Ding P, Hu W, Dong Z, Liu X, Wang M. Effectiveness of the Lanzhou lamb rotavirus vaccine against gastroenteritis among children. Vaccine. 2012;31:154–58. doi:10.1016/j.vaccine.2012.10.078.
   PubMed Web of Science ®Google Scholar
• Shi S, Liang J, Liu T, Yuan X, Ruan B, Sun L, Tang Y, Yang B, Hu D, Huang C. Depression increases sympathetic activity and exacerbates myocardial remodeling after myocardial infarction: evidence from an animal experiment. PLoS One. 2014;9:e101734. doi:10.1371/journal.pone.0101734.
   PubMed Web of Science ®Google Scholar
• Fu C, Dong Z, Shen J, Yang Z, Liao Y, Hu W, Pei S, Shaman J. Rotavirus gastroenteritis infection among children vaccinated and unvaccinated with rotavirus vaccine in Southern China: A population-based assessment. JAMA Netw Open. 2018;1:e181382. doi:10.1001/jamanetworkopen.2018.1382.
   PubMed Web of Science ®Google Scholar
• Zhang J, Liu H, Jia L, Payne DC, Hall AJ, Xu Z, Gao Z, Chang Z, Jiang B, Parashar UD, et al. Active, population-based surveillance for rotavirus gastroenteritis in Chinese children: Beijing municipality and Gansu Province, China. Pediatr Infect Dis J. 2015;34:40–46. doi:10.1097/INF.0000000000000505.
   PubMed Web of Science ®Google Scholar
• Cortese MM, Parashar UD. Prevention of rotavirus gastroenteritis among infants and children: recommendations of the advisory committee on immunization practices (ACIP). MMWR Recomm Rep. 2009;58:1–25.
   PubMedGoogle Scholar
• Dzeshka MS, Shahid F, Shantsila A, Lip GYH. Hypertension and atrial fibrillation: an intimate association of epidemiology, pathophysiology, and outcomes. Am J Hypertens. 2017;30:733–55. doi:10.1093/ajh/hpx013.
   PubMed Web of Science ®Google Scholar
• Patton JT. Rotavirus diversity and evolution in the post-vaccine world. Discov Med. 2012;13:85–97.
   PubMed Web of Science ®Google Scholar
• Yen C, Tate JE, Patel MM, Cortese MM, Lopman B, Fleming J, Lewis K, Jiang B, Gentsch J, Steele D, et al. Rotavirus vaccines: update on global impact and future priorities. Hum Vaccin. 2011;7:1282–90. doi:10.4161/hv.7.12.18321.
   PubMed Web of Science ®Google Scholar
• World Health Organization. Global rotavirus information and surveillance bulletin. Reporting Period 2010. 2011. [accessed at 2021 Feb 5]. https://www.who.int/immunization/sage/3_Final_RV_bulletin_Jan_Dec_2010_Data_nov11.pdf
   Google Scholar
• Zaman K, Yunus M, El Arifeen S, Azim T, Faruque AS, Huq E, Hossain I, Luby SP, Victor JC, Dallas MJ, et al. Methodology and lessons-learned from the efficacy clinical trial of the pentavalent rotavirus vaccine in Bangladesh. Vaccine. 2012;30(Suppl 1):A94–100. doi:10.1016/j.vaccine.2011.07.117.
   PubMed Web of Science ®Google Scholar
• Gupta S, Chaudhary S, Bubber P, Ray P. Epidemiology and genetic diversity of group A rotavirus in acute diarrhea patients in pre-vaccination era in Himachal Pradesh, India. Vaccine. 2019;37:5350–56. doi:10.1016/j.vaccine.2019.07.037.
   PubMed Web of Science ®Google Scholar
• Omari JZ. Characterization of rotavirus among children under five years with gastroenteritis at Kenyatta National Hospital, Kenya. Thesis for Master of Science in Molecular Medicine. Kenya. College of Health Science, Jomo Kenyatta University of Agriculture and Technology; 2019.
   Google Scholar
• Koçak AA, Aydın M, Matsumoto T, Yahiro T, Dalgıç B, Bozdayi G, Ahmed K. Emergence of rotavirus G9 in 2012, as the dominant genotype in Turkish children with diarrhea, in a university hospital in Ankara. Rev Rom Med Lab. 2019;27:209–18.
   Web of Science ®Google Scholar
• Tian Y, Chughtai AA, Gao Z, Yan H, Chen Y, Liu B, Huo D, Jia L, Wang Q, MacIntyre CR. Prevalence and genotypes of group A rotavirus among outpatient children under five years old with diarrhea in Beijing, China, 2011-2016. BMC Infect Dis. 2018;18:497. doi:10.1186/s12879-018-3411-3.
   PubMed Web of Science ®Google Scholar
• Dian Z, Wang B, Fan M, Dong S, Feng Y, Zhang AM, Liu L, Niu H, Li Y, Xia X. Completely genomic and evolutionary characteristics of human-dominant G9P[8] group A rotavirus strains in Yunnan, China. J Gen Virol. 2017;98:1163–68. doi:10.1099/jgv.0.000807.
   PubMed Web of Science ®Google Scholar
• Xue R, Tian Y, Zhang Y, Zhang M, Li Z, Chen S, Liu Q. Diversity of group A rotavirus of porcine rotavirus in Shandong province China. Acta Virol. 2018;62:229–34. doi:10.4149/av_2018_216.
   PubMed Web of Science ®Google Scholar
• Than VT, Jeong S, Kim W. A systematic review of genetic diversity of human rotavirus circulating in South Korea. Infect Genet Evol. 2014;28:462–69. doi:10.1016/j.meegid.2014.08.020.
   PubMed Web of Science ®Google Scholar
• Wu FT, Bányai K, Jiang B, Liu LT, Marton S, Huang YC, Huang LM, Liao MH, Hsiung CA. Novel G9 rotavirus strains co-circulate in children and pigs, Taiwan. Sci Rep. 2017;7:40731. doi:10.1038/srep40731.
   PubMed Web of Science ®Google Scholar
• Almalki SSR. Circulating rotavirus G and P strains post rotavirus vaccination in Eastern Mediterranean Region. Saudi Med J. 2018;39:755–66. doi:10.15537/smj.2018.8.21394.
   PubMed Web of Science ®Google Scholar
• Kaplon J, Grangier N, Pillet S, Minoui-Tran A, Vabret A, Wilhelm N, Prieur N, Lazrek M, Alain S, Mekki Y, et al. Predominance of G9P[8] rotavirus strains throughout France, 2014–2017. Clin Microbiol Infect. 2018;24:660.e661-660.e664. doi:10.1016/j.cmi.2017.10.009.
   PubMed Web of Science ®Google Scholar
• Tapisiz A, Bedir Demirdag T, Cura Yayla BC, Gunes C, Ugraş Dikmen A, Tezer H, Baran Aksakal N, Bozdayi G, Ozkan S. Rotavirus infections in children in Turkey: A systematic review. Rev Med Virol. 2019;29:e2020. doi:10.1002/rmv.2020.
   PubMed Web of Science ®Google Scholar
• Ianiro G, Micolano R, Di Bartolo I, Scavia G, Monini M. Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017. Euro Surveill. 2019;15:24.
   Google Scholar
• Ogden KM, Tan Y, Akopov A, Stewart LS, McHenry R, Fonnesbeck CJ, Piya B, Carter MH, Fedorova NB, Halpin RA, et al. Multiple introductions and antigenic mismatch with vaccines may contribute to increased predominance of G12P[8] rotaviruses in the United States. J Virol. 2019:93(1).
   Web of Science ®Google Scholar
• Damtie D, Melku M, Tessema B, Vlasova AN. Prevalence and genetic diversity of rotaviruses among under-five children in ethiopia: a systematic review and meta-analysis. Viruses. 2020;12(1):62.
   Web of Science ®Google Scholar
• Lartey BL, Damanka S, Dennis FE, Enweronu-Laryea CC, Addo-Yobo E, Ansong D, Kwarteng-Owusu S, Sagoe KW, Mwenda JM, Diamenu SK, et al. Rotavirus strain distribution in Ghana pre- and post- rotavirus vaccine introduction. Vaccine. 2018;36:7238–42. doi:10.1016/j.vaccine.2018.01.010.
   PubMedGoogle Scholar
• Yandle Z, Coughlan S, Dean J, Tuite G, Conroy A, De Gascun CF. Group A rotavirus detection and genotype distribution before and after introduction of a national immunisation programme in Ireland: 2015-2019. Pathogens. 2020;9(6).
   Web of Science ®Google Scholar
• Santos VS, Nóbrega FA, Soares MWS, Moreira RD, Cuevas LE, Gurgel RQ. Rotavirus genotypes circulating in Brazil before and after the national rotavirus vaccine program: a review. Pediatr Infect Dis J. 2018;37:e63–e65. doi:10.1097/INF.0000000000001770.
   PubMed Web of Science ®Google Scholar
• Degiuseppe JI, Stupka JA. Genotype distribution of group A rotavirus in children before and after massive vaccination in Latin America and the Caribbean: systematic review. Vaccine. 2020;38:733–40. doi:10.1016/j.vaccine.2019.11.017.
   PubMed Web of Science ®Google Scholar