995
Views
4
CrossRef citations to date
0
Altmetric
Research Paper

The isolation and functional identification on producing cellulase of Pseudomonas mendocina

, , , &
Pages 382-391 | Received 09 Mar 2016, Accepted 17 Jun 2016, Published online: 06 Oct 2016

References

  • Schädel C, Blöchl A, Richter A, Hoch G. Short-term dynamics of nonstructural carbohydrates and hemicelluloses in young branches of temperate forest trees during bud break. Tree Physiol 2009;29:901-11; http://dx.doi.org/10.1093/treephys/tpp034
  • Li Y, Tian C, Tian H, Zhang J, He X, Ping W, Lei H. Improvement of bacterial cellulose production by manipulating the metabolic pathways in which ethanol and sodium citrate involved. Appl Microbiol Biotechnol 2012;96:1479-87; PMID:22782249; http://dx.doi.org/10.1007/s00253-012-4242-6
  • Sarah M, Ely M, Yoav B, Dan G, Yitzhak H, Raphael L, Yuval S, Wilson DB, Bayer EA. Deconstruction of lignocellulose into soluble sugars by native and designer cellulosomes. Mbio 2012;3:214104-4.
  • Chiueh PT, Lee KC, Syu FS, Lo SL. Implications of biomass pretreatment to cost and carbon emissions: Case study of rice straw and Pennisetum in Taiwan. Bioresour Technol 2012;108:285-94; PMID:22281146; http://dx.doi.org/10.1016/j.biortech.2012.01.006
  • Zhang YHP, Himmel ME, Mielenz JR. Outlook for cellulase improvement: Screening and selection strategies. Biotechnol Adv 2006;24:452-81; PMID:16690241; http://dx.doi.org/10.1016/j.biotechadv.2006.03.003
  • Zhang L, Guo ZP, Ding ZY, Wang ZX, Shi GY. Construction of the industrial ethanol-producing strain of Saccharomyces cerevisiae able to ferment cellobiose and melibiose. Prikl Biokhim Mikrobiol 2012;48:243-8; PMID:22586919
  • Ha SJ, Galazka JM, Kim SR, Choi JH, Yang XM, Seo JH, Glass NL, Cate JHD, Jin YS. Engineered Saccharomyces cerevisiae capable of simultaneous cellobiose and xylose fermentation. Proc Natl Acad Sci U S A 2011;108:504-9; PMID:21187422; http://dx.doi.org/10.1073/pnas.1010456108
  • Weiss N, Börjesson J, Pedersen LS, Meyer AS. Enzymatic lignocellulose hydrolysis: Improved cellulase productivity by insoluble solids recycling. Biotechnol Biofuels 2013;6:1-14; PMID:23298573; http://dx.doi.org/10.1186/1754-6834-6-5
  • Wesenberg D, Kyriakides I, Agathos SN. White-rot fungi and their enzymes for the treatment of industrial dye effluents. Biotechnol Adv 2003;22:161-87; PMID:14623049; http://dx.doi.org/10.1016/j.biotechadv.2003.08.011
  • Eisenhauer N, Migunova VD, Ackermann M, Ruess L, Scheu S. Changes in plant species richness induce functional shifts in soil nematode communities in experimental grassland. Plos One 2011;6:e24087-7; PMID:21909412; http://dx.doi.org/10.1371/journal.pone.0024087
  • Mao X, Huixin LI, Long M, Feng HU. Effects of bacteria-feeding nematode at its different density on bacterial number, bacterial activity and soil nitrogen mineralization. J Appl Ecol 2005;16:1112-6.
  • Rønn R, Mccaig AE, Griffiths BS, Prosser JI. Impact of protozoan grazing on bacterial community structure in soil microcosms. Appl Environ Microbiol 2002;68:6094-105; PMID:12450833; http://dx.doi.org/10.1128/AEM.68.12.6094-6105.2002
  • Lednická D, Mergaert J, Cnockaert MC, Swings J. Isolation and identification of cellulolytic bacteria involved in the degradation of natural cellulosic fibres. Syst Appl Microbiol 2000;23:292-9; PMID:10930083; http://dx.doi.org/10.1016/S0723-2020(00)80017-X
  • Poll J, Marhan S, Haase S, Hallmann J, Kandeler E, Ruess L. Low amounts of herbivory by root-knot nematodes affect microbial community dynamics and carbon allocation in the rhizosphere. Fems Microbiol Ecol 2007;62:268-79; PMID:17916076; http://dx.doi.org/10.1111/j.1574-6941.2007.00383.x
  • Florencio C, Couri S, Farinas CS. Correlation between agar plate screening and solid-state fermentation for the prediction of cellulase production by Trichoderma strains. Petroleum Drilling Techniques 2011;41:100-5.
  • Liu JM, Xin XJ, Li CX, Xu JH, Bao J. Cloning of thermostable cellulase genes of clostridium thermocellum and their secretive expression in bacillus subtilis. Appl Biochem Biotechnol 2012;166:652-62; PMID:22101447; http://dx.doi.org/10.1007/s12010-011-9456-z
  • Tanskul S, Amornthatree K, Jaturonlak N. A new cellulose-producing bacterium, Rhodococcus sp MI 2: Screening and optimization of culture conditions. Carbohydr Polym 2013;92:421-8; PMID:23218315; http://dx.doi.org/10.1016/j.carbpol.2012.09.017
  • Maurya DP, Singh D, Pratap D, Maurya JP. Optimization of solid state fermentation conditions for the production of cellulase by Trichoderma reesei. J Environ Biol 2012;33:5-8; PMID:23033636
  • Sivakumar S, Nityanandi D, Barathi S, Prabha D, Rajeshwari S, Son HK, Subbhuraam CV. Selected enzyme activities of urban heavy metal-polluted soils in the presence and absence of an oligochaete, Lampito mauritii (Kinberg). J Hazard Mater 2012;227-228:179-84; PMID:22658212; http://dx.doi.org/10.1016/j.jhazmat.2012.05.030
  • Schägger H, Jagow GV. Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal Biochem 1987;166:368-79; PMID:2449095; http://dx.doi.org/10.1016/0003-2697(87)90587-2
  • Wang X, Peng Z, Sun X, Liu D, Chen S, Li F, Xia H, Lu T. The FPase properties and morphology changes of a cellulolytic bacterium, Sporocytophaga sp. JL-01, on decomposing filter paper cellulose. J Gen Appl Microbiol 2012;58:429-36; PMID:23337578; http://dx.doi.org/10.2323/jgam.58.429
  • Gusakov AV, Kondratyeva EG, Sinitsyn AP. Comparison of two methods for assaying reducing sugars in the determination of carbohydrase activities. Int J Anal Chem 2011;26:283658-8; PMID:21647284
  • Borgna JL. Requirements for reliable determination of binding affinity constants by saturation analysis approach. J Steroid Biochem Mol Biol 2004;92:419-33; PMID:15698547; http://dx.doi.org/10.1016/j.jsbmb.2004.08.004
  • Reiken SR, Knob RJ, Briedis DM. Evaluation of intrinsic immobilized kinetics in hollow fiber reactor systems. Enzyme & Microb Technol 1990;12:736-42; PMID:1367479; http://dx.doi.org/10.1016/0141-0229(90)90144-F
  • Karpe F, Hamsten A. Determination of apolipoproteins B-48 and B-100 in triglyceride-rich lipoproteins by analytical SDS-PAGE. J Lipid Res 1994;35:1311-7; PMID:7964192
  • Cheng F, Li S, Li C, Shuang M, Zou L. Isolation, identification and cellulase production of a cellulolytic bacterium from intestines of giant panda. Acta Microbiologica Sinica 2012;52:1113-21; PMID:23236845
  • Béguin P. Molecular biology of cellulose degradation. Ann Rev Microbiol 1990;44:219-48; http://dx.doi.org/10.1146/annurev.mi.44.100190.001251
  • Chen YL, Xu CL, Xu XN, Xie H, Zhang BX, Qin HG, Zhou WQ, Li DS. Evaluation of predation abilities of Blattisocius dolichus (Acari: Blattisociidae) on a plant-parasitic nematode, Radopholus similis (Tylenchida: Pratylenchidae). Exp Appl Acarol 2013;60:289-98; PMID:23269565; http://dx.doi.org/10.1007/s10493-012-9650-x
  • Duboisset J, Ferrand P, He W, Wang X, Rigneault H, Brasselet S. Thioflavine-T and Congo Red reveal the polymorphism of insulin amyloid fibrils when probed by polarization-resolved fluorescence microscopy. J Phys Chem B 2013;117:784-8; PMID:23289901; http://dx.doi.org/10.1021/jp309528f
  • Farnet AM, Qasemian L, Peter-Valence F, Ruaudel F, Savoie JM, Ferré E. Capacity for colonization and degradation of horse manure and wheat-straw-based compost by different strains of Agaricus subrufescens during the first two weeks of cultivation. Bioresour Technol 2012;131C:266-73; PMID:23357087
  • Vaughan NE, Lenton TM. Interactions between reducing CO2 emissions, CO2 removal and solar radiation management. Philos Trans Royal Soc A Math Phys Eng Sci 2012;370:4343-64; PMID:22869802; http://dx.doi.org/10.1098/rsta.2012.0188
  • Mandels M, Hontz L, Nystrom J, Ib LRL. Enzymatic hydrolysis of waste cellulose. Biotechnol Bioeng 2010;105:1-2; PMID:19937801; http://dx.doi.org/10.1002/bit.22603
  • Gu W, Zhang F, Xu P, Xie K. Screening of two straw-cellulose degrading actinomycetes. Acta Microbiologica Sinica 2012;52:1085-93; PMID:23236842
  • Aragone MR, Maurizi DM, Clara LO, Navarro Estrada JL, Ascione A. Pseudomonas mendocina, an environmental bacterium isolated from a patient with human infective endocarditis. J Clin Microbiol 1992;30:1583-4; PMID:1624580
  • Reyes MP, Palutke WA, Wylin RF. Pseudomonas endocarditis in the Detroit Medical Center. 1969-1972. Medicine 1973;52:173-94; PMID:20407410; http://dx.doi.org/10.1097/00005792-197305000-00001
  • Yen KM, Karl MR, Blatt LM, Simon MJ, Winter RB, Fausset PR, Lu HS, Harcourt AA, Chen KK. Cloning and characterization of a Pseudomonas mendocina KR1 gene cluster encoding toluene-4-monooxygenase. J Bacteriol 1991;173:5315-27; PMID:1885512
  • Guo W, Song C, Kong M, Geng W, Wang Y, Wang S. Simultaneous production and characterization of medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides by Pseudomonas mendocina NK-01. Appl Microbiol Biotechnol 2011;92:791-801; PMID:21617928; http://dx.doi.org/10.1007/s00253-011-3333-0
  • Anzai Y, Kim H, Park JY, Wakabayashi H, Oyaizu H. Phylogenetic affiliation of the pseudomonads based on 16 S rRNA sequence. Int J Syst Evol Microbiol 2000;50:1563-89; PMID:10939664; http://dx.doi.org/10.1099/00207713-50-4-1563
  • Rousk J, Bååth E, Brookes PC, Lauber CL, Lozupone C, Caporaso JG, Knight R, Fierer N. Soil bacterial and fungal communities across a pH gradient in an arable soil. Isme J 2010;4:1340-51; PMID:20445636
  • Kim S, Sun HH, Cho K, Lee I, Yoo G, Kang H. Effects of elevated CO 2 and Pb on the microbial community in the rhizosphere of Pinus densiflora. J Microbiol 2012;50:895-901; PMID:23274974; http://dx.doi.org/10.1007/s12275-012-2207-1

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.