A PCR-lateral flow assay system based on gold magnetic nanoparticles for CYP2C19 genotyping and its clinical applications

References

• Hou X, Han W, Gan Q, et al. CYP2C19 and ABCB1 genetic polymorphisms correlate with the recurrence of ischemic cardiovascular adverse events after clopidogrel treatment. J Clin Lab Anal. 2018;32:e22369.
   PubMed Web of Science ®Google Scholar
• Matetzky S, Shenkman B, Guetta V, et al. Clopidogrel resistance is associated with increased risk of recurrent atherothrombotic events in patients with acute myocardial infarction. Circulation. 2004;109:3171–3175.
   PubMed Web of Science ®Google Scholar
• Jia DM, Chen ZB, Zhang MJ, et al. CYP2C19 polymorphisms and antiplatelet effects of clopidogrel in acute ischemic stroke in China. Stroke. 2013;44:1717–1719.
   PubMed Web of Science ®Google Scholar
• Jeong YH, Tantry US, Kim IS, et al. Effect of CYP2C19*2 and *3 loss-of-function alleles on platelet reactivity and adverse clinical events in East Asian acute myocardial infarction survivors treated with clopidogrel and aspirin. Circ Cardiovasc Interv. 2011;4:585–594.
   PubMed Web of Science ®Google Scholar
• Grant JR, Arantes AS, Liao X, et al. In-depth annotation of SNPs arising from resequencing projects using NGS-SNP. Bioinformatics. 2011;27:2300–2301.
   PubMed Web of Science ®Google Scholar
• Ahsan M, Li X, Lundberg AE, et al. Identification of candidate genes and mutations in QTL regions for chicken growth using bioinformatic analysis of NGS and SNP-chip data. Front Genet. 2013;4:226.
   PubMedGoogle Scholar
• Radvansky J, Resko P, Surovy M, et al. High-resolution melting analysis for genotyping of the myotonic dystrophy type 1 associated Alu insertion/deletion polymorphism. Anal Biochem. 2010;398:126–128.
   PubMed Web of Science ®Google Scholar
• Harrington CT, Lin EI, Olson MT, et al. Fundamentals of pyrosequencing. Arch Pathol Lab Med. 2013;137:1296–1303.
   PubMed Web of Science ®Google Scholar
• Howarth R, Yearwood C, Harvey JF. Application of dHPLC for mutation detection of the fibrillin-1 gene for the diagnosis of Marfan syndrome in a National Health Service Laboratory. Genet Test. 2007;11:146–152.
   PubMedGoogle Scholar
• Kriegsmann M, Arens N, Endris V, et al. Detection of KRAS, NRAS, and BRAF by mass spectrometry – a sensitive, reliable, fast and cost-effective technique. Diagn Pathol. 2015;10:132.
   Web of Science ®Google Scholar
• Martinez-Serra J, Robles J, Nicolas A, et al. Fluorescence resonance energy transfer-based real-time polymerase chain reaction method without DNA extraction for the genotyping of F5, F2, F12, MTHFR, and HFE. J Blood Med. 2014;5:99–106.
   PubMedGoogle Scholar
• Loo KW, Griffiths LR, Gan SH. A novel multiplex PCR-RFLP method for simultaneous detection of the MTHFR 677 C > T, eNOS +894 G > T and – eNOS – 786 T > C variants among Malaysian Malays. BMC Med Genet. 2012;13:34.
   PubMed Web of Science ®Google Scholar
• Roberts DG, Morrison TB, Liu-Cordero SN, et al. A nanoliter fluidic platform for large-scale single nucleotide polymorphism genotyping. BioTechniques. 2009;46:ix–xiii.
   PubMed Web of Science ®Google Scholar
• Zhou SF, Liu JP, Chowbay B. Polymorphism of human cytochrome P450 enzymes and its clinical impact. Drug Metab Rev. 2009;41:89–295.
   PubMed Web of Science ®Google Scholar
• Tost J, Gut IG. Genotyping single nucleotide polymorphisms by MALDI mass spectrometry in clinical applications. Clin Biochem. 2005;38:335–350.
   PubMed Web of Science ®Google Scholar
• Yang D, Ma J, Zhang Q, et al. Polyelectrolyte-coated gold magnetic nanoparticles for immunoassay development: toward point of care diagnostics for syphilis screening. Anal Chem. 2013;85:6688–6695.
   PubMed Web of Science ®Google Scholar
• Wenli HFS, Yan K, Peng M, et al. Fe3O4/Au/Fe3O4 nanoflowers exhibiting tunable saturation magnetization and enhanced bioconjugation. Nanoscale. 2012;4:747–751.
   PubMed Web of Science ®Google Scholar
• Mieszawska AJ, Mulder WJ, Fayad ZA, et al. Multifunctional gold nanoparticles for diagnosis and therapy of disease. Mol Pharm. 2013;10:831–847.
   PubMed Web of Science ®Google Scholar
• Bagheri S, Yasemi M, Safaie-Qamsari E, et al. Using gold nanoparticles in diagnosis and treatment of melanoma cancer. Artif Cells Nanomed Biotechnol.2018;46:462–471.
   Web of Science ®Google Scholar
• Golchin K, Golchin J, Ghaderi S, et al. Gold nanoparticles applications: from artificial enzyme till drug delivery. Artif Cells Nanomed Biotechnol. 2018;46:250–254.
   PubMed Web of Science ®Google Scholar
• Hui W, Zhang S, Zhang C, et al. A novel lateral flow assay based on GoldMag nanoparticles and its clinical applications for genotyping of MTHFR C677T polymorphisms. Nanoscale. 2016;8:3579–3587.
   PubMed Web of Science ®Google Scholar
• Rastogi SK, Gibson CM, Branen JR, et al. DNA detection on lateral flow test strips: enhanced signal sensitivity using LNA-conjugated gold nanoparticles. Chem Commun. 2012;48:7714–7716.
   PubMed Web of Science ®Google Scholar
• Newton CR, Graham A, Heptinstall LE, et al. Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS). Nucleic Acids Res. 1989;17:2503–2516.
   PubMed Web of Science ®Google Scholar
• Little S. Amplification-refractory mutation system (ARMS) analysis of point mutations. Curr Protoc Hum Genet. 2001;Chapter 9:Unit 9.8. New York (NY): John Wiley & Sons, Inc; 2001. p. 9.8.1−9.8.12.
   PubMedGoogle Scholar
• Liu J, Huang S, Sun M, et al. An improved allele-specific PCR primer design method for SNP marker analysis and its application. Plant Methods. 2012;8:34.
   PubMed Web of Science ®Google Scholar
• Cui Y, Hu D, Fang Y, et al. Preparation and mechanism of Fe3O4/Au core/shell super-paramagnetic microspheres. Sc China Ser B-Chem. 2001;44:404–410.
   Google Scholar
• Chen F, Zhao Y, Fan C, et al. Mismatch extension of DNA polymerases and high-accuracy single nucleotide polymorphism diagnostics by gold nanoparticle-improved isothermal amplification. Anal Chem. 2015;87:8718–8723.
   PubMed Web of Science ®Google Scholar
• Yang D, Ma J, Xue C, et al. One-pot synthesis of poly (acrylic acid)-stabilized Fe3O4 nanocrystal clusters for the simultaneously qualitative and quantitative detection of biomarkers in lateral flow immunoassay. J Pharm Biomed Anal. 2018;159:119–126.
   PubMed Web of Science ®Google Scholar
• Zhou Q, Yu XM, Lin HB, et al. Genetic polymorphism, linkage disequilibrium, haplotype structure and novel allele analysis of CYP2C19 and CYP2D6 in Han Chinese. Pharmacogenomics J. 2009;9:380–394.
   PubMed Web of Science ®Google Scholar
• Chen L, Qin S, Xie J, et al. Genetic polymorphism analysis of CYP2C19 in Chinese Han populations from different geographic areas of mainland China. Pharmacogenomics. 2008;9:691–702.
   PubMed Web of Science ®Google Scholar
• Hu LM, Dai DP, Hu GX, et al. Genetic polymorphisms and novel allelic variants of CYP2C19 in the Chinese Han population. Pharmacogenomics. 2012;13:1571–1581.
   PubMed Web of Science ®Google Scholar
• Man M, Farmen M, Dumaual C, et al. Genetic variation in metabolizing enzyme and transporter genes: comprehensive assessment in 3 major East Asian subpopulations with comparison to Caucasians and Africans. J Clin Pharmacol. 2010;50:929–940.
   PubMed Web of Science ®Google Scholar