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Original Articles

Low pathogenic avian influenza (H7N6) virus causing an outbreak in commercial Turkey farms in Chile

, , , , , , , & ORCID Icon show all
Pages 479-485 | Received 17 Oct 2018, Accepted 25 Feb 2019, Published online: 29 Mar 2019

References

  • Alexander DJ. An overview of the epidemiology of avian influenza. Vaccine. 2007;25:5637–5644. doi:10.1016/j.vaccine.2006.10.051.
  • Olsen B, Munster VJ, Wallensten A, et al. Global patterns of influenza a virus in wild birds. Science. 2006;312:384–388. doi:10.1126/science.1122438.
  • Vandegrift KJ, Sokolow SH, Daszak P, et al. Ecology of avian influenza viruses in a changing world. Ann NY Acad Sci. 2010;1195:113–128. doi: 10.1111/j.1749-6632.2010.05451.x
  • Swayne DE, Suarez DL. Highly pathogenic avian influenza. Rev Sci Tech Oie. 2000;19:463–482. doi: 10.20506/rst.19.2.1230
  • OIE. Terrestrial animal health Code. OIE Terrestrial Manual. 2018;1:492–507.
  • OIE. Event summary: Low pathogenic avian influenza (poultry). Chile; 2019. http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review/viewsummary?fupser=&dothis=&reportid=22152.
  • Jimenez-Bluhm P, Karlsson EA, Freiden P, et al. Wild birds in Chile Harbor diverse avian influenza A viruses. Emerg Microbes Infect. 2018;7:44. doi:10.1038/s41426-018-0046-9.
  • Suarez DL, Senne DA, Banks J, et al. Recombination resulting in virulence shift in avian influenza outbreak, Chile. Emerg Infect Dis. 2004;10:693–699. doi:10.3201/eid1004.030396.
  • Spackman E, McCracken KG, Winker K, et al. H7n3 avian influenza virus found in a South American wild duck is related to the Chilean 2002 poultry outbreak, contains genes from equine and North American wild bird lineages, and is adapted to domestic turkeys. J Virol. 2006;80:7760–7764. doi:10.1128/JVI.00445-06.
  • Baigent SJ, McCauley JW. Influenza type A in humans, mammals and birds: determinants of virus virulence, host-range and interspecies transmission. BioEssays. 2003;25:657–671. doi:10.1002/bies.10303.
  • Li J, Zu Dohna H, Cardona CJ, et al. Emergence and genetic variation of neuraminidase stalk deletions in avian influenza viruses. PLoS One. 2011;6:e14722. doi:10.1371/journal.pone.0014722.
  • Bright RA, Bo Shu DKS, Cox NJ, et al. Adamantane resistance among influenza A viruses isolated early during the 2005-2006 influenza season in the United States. JAMA-Exp. 2006;295:891–894. doi: 10.1001/jama.295.8.joc60020
  • Alvarez P, Mattiello R, Rivailler P, et al. First isolation of an H1N1 avian influenza virus from wild terrestrial non-migratory birds in Argentina. Virology. 2010;396:76–84. doi:10.1016/j.virol.2009.10.009.
  • Pereda AJ, Uhart M, Perez AA, et al. Avian influenza virus isolated in wild waterfowl in Argentina: evidence of a potentially unique phylogenetic lineage in South America. Virology. 2008;378:363–370. doi:10.1016/j.virol.2008.06.010.
  • Nelson MI, Pollett S, Ghersi B, et al. The genetic diversity of influenza A viruses in wild birds in Peru. PLoS One. 2016;11:e0146059. doi:10.1371/journal.pone.0146059.
  • Jimenez-Bluhm P, Di Pillo F, Bahl J, et al. Circulation of influenza in backyard productive systems in central Chile and evidence of spillover from wild birds. Prev Vet Med. 2018;153:1–6. doi:10.1016/j.prevetmed.2018.02.018.
  • Jimenez-Bluhm P, Karlsson EA, Ciuoderis KA, et al. Avian H11 influenza virus isolated from domestic poultry in a Colombian live animal market. Emerg Microbes Infect. 2016;5:e121. doi:10.1038/emi.2016.121.
  • Dugan VG, Chen R, Spiro DJ, et al. The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathog.. 2008;4:e1000076. doi:10.1371/journal.ppat.1000076.
  • Bravo-Vasquez N, Di Pillo F, Lazo A, et al. Presence of influenza viruses in backyard poultry and swine in El Yali wetland, Chile. Prev Vet Med. 2016;134:211–215. doi:10.1016/j.prevetmed.2016.10.004.
  • Victoriano PF, González AL, Schlatter R. Estado de conocimiento de las aves de aguas continentales de Chile. Gayana (Concepción). 2006;70:140–162.
  • Kang HM, Choi J-G, Kim K-I, et al. Genetic and antigenic characteristics of H4 subtype avian influenza viruses in Korea and their pathogenicity in quails, domestic ducks and mice. J Gen Virol. 2013;94:30–39. doi:10.1099/vir.0.046581-0.
  • Pielak RM, Schnell JR, Chou JJ. Mechanism of drug inhibition and drug resistance of influenza A M2 channel. Proc Natl Acad Sci. 2009;106:7379–7384. doi:10.1073/pnas.0902548106.
  • Pillai SP, Pantin-Jackwood M, Yassine HM, et al. The high susceptibility of turkeys to influenza viruses of different origins implies their importance as potential intermediate hosts. Avian Dis. 2010;54:522–526. doi:10.1637/8770-033109-Review.1.
  • Tumpey TM, Kapczynski DR, Swayne DE. Comparative susceptibility of chickens and turkeys to avian influenza A H7N2 virus infection and protective efficacy of a commercial avian influenza H7N2 virus vaccine. Avian Dis. 2004;48:167–176. doi:10.1637/7103.
  • Lee DH, Torchetti MK, Killian ML, et al. Highly pathogenic avian influenza A(H7N9) virus, Tennessee, USA, March 2017. Emerg Infect Dis. 2017;23:1860–1863. doi:10.3201/eid2311.171013.
  • Hall T. Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series. 1999;41:95–98.
  • Edgar RC. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 2004;32:1792–1797. doi:10.1093/nar/gkh340.
  • Bao Y, et al. The influenza virus resource at the National Center for Biotechnology information. J Virol. 2008;82:596–601. doi:10.1128/JVI.02005-07.
  • Kumar S, Stecher G, Tamura K. MEGA7: molecular evolutionary Genetics analysis Version 7.0 for Bigger Datasets. Mol Biol Evol. 2016;33:1870–1874. doi:10.1093/molbev/msw054.
  • Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 2014;30:1312–1313. doi:10.1093/bioinformatics/btu033.
  • Rambaut A, Lam TT, Carvalho LM, et al. Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen). Virus Evol. 2016;2; doi:UNSP vew007 10.1093/ve/vew007.
  • Bouckaert R, Heled J, Kühnert D, et al. BEAST 2: A Software Platform for Bayesian evolutionary analysis. Plos Comput Biol. 2014;10; doi:ARTN e100353710.1371/journal.pcbi.1003537.
  • Hinshaw VS, Webster RG, Turner B. Novel influenza A viruses isolated from Canadian feral ducks: including strains antigenically related to swine influenza (Hsw1N1) viruses. J Gen Virol. 1978;41:115–127. doi:10.1099/0022-1317-41-1-115.
  • Reed LJ, Muench H. A simple method of estimating fifty per cent endpoints. Am J Epidemiol. 1938;27:493–497. doi: 10.1093/oxfordjournals.aje.a118408