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Emerging Microbes & Infections Volume 9, 2020 - Issue 1
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Articles

Precise diagnosis of Neisseria macacae infective endocarditis assisted by nanopore sequencing

Jing-Wen Aia Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaView further author information
,
Hong Liub Department of Clinical Laboratory, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaView further author information
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Hui-Xia Lia Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of China;c Department of Infectious Diseases, No. 988. Hospital of Liberation Army, Henan, People’s Republic of ChinaView further author information
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Qing-Xia Linga Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of China;d Department of Infectious Diseases, Qingpu Branch of Zhongshan Hospital, Fudan University, Shanghai, People’s Republic of ChinaView further author information
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Yan-Qin Aia Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of China;e Department of Infectious Diseases, Xuchang Central Hospital affiliated to Henan University of Science and Technology, Henan, People’s Republic of ChinaView further author information
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Si-Jia Suna Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of China;f Department of Gastroenterology, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaView further author information
,
Xuan Wanga Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaView further author information
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Bing-Yan Zhanga Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaView further author information
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Jian-Ming Zhenga Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0003-1471-9078View further author information
ORCID Icon,
Jia-Lin Jina Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaCorrespondence[email protected]
View further author information
&
Wen-Hong Zhanga Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, People’s Republic of ChinaCorrespondence[email protected]
View further author information
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Pages 1864-1868 | Received 10 Mar 2020, Accepted 05 Aug 2020, Published online: 24 Aug 2020

References

  • Vecten M, Martel H, Casalta JP, et al. Fatal Neisseria macacae infective endocarditis: first report. Infection. 2017;45(3):369–371. doi: 10.1007/s15010-017-0985-4
  • Wang A, Gaca JG, Chu VH. Management considerations in infective endocarditis: a review. JAMA. 2018;320(1):72–83. doi: 10.1001/jama.2018.7596
  • Schmidt K, Mwaigwisya S, Crossman LC, et al. Identification of bacterial pathogens and antimicrobial resistance directly from clinical urines by nanopore-based metagenomic sequencing. J Antimicrob Chemother. 2017;72(1):104–114. doi: 10.1093/jac/dkw397
  • Wick RR, Judd LM, Gorrie CL, et al. Unicycler: resolving bacterial genome assemblies from short and long sequencing reads. PLoS Comput Biol. 2017;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595
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  • Haddow LJ, Mulgrew C, Ansari A, et al. Neisseria elongata endocarditis: case report and literature review. Clin Microbiol Infect. 2003;9(5):426–430. doi: 10.1046/j.1469-0691.2003.00533.x
  • Wilson MR, Naccache SN, Samayoa E, et al. Actionable diagnosis of neuroleptospirosis by next-generation sequencing. N Engl J Med. 2014;370(25):2408–2417. doi: 10.1056/NEJMoa1401268
  • Choutko V, Lazarevic V, Gaïa N, et al. Rare case of community-acquired endocarditis caused by Neisseria meningitidis assessed by clinical metagenomics. Front Cardiovasc Med. 2019;6:112. doi: 10.3389/fcvm.2019.00112
  • Chen C, Zhang Y, Yu SL, et al. Tracking carbapenem-producing Klebsiella pneumoniae outbreak in an intensive care unit by whole genome sequencing. Front Cell Infect Microbiol. 2019;9:281. doi: 10.3389/fcimb.2019.00281
  • Lavezzo E, Barzon L, Toppo S, et al. Third generation sequencing technologies applied to diagnostic microbiology: benefits and challenges in applications and data analysis. Expert Rev Mol Diagn. 2016;16(9):1011–1023. doi: 10.1080/14737159.2016.1217158
  • Baddour LM, Wilson WR, Bayer AS, et al. Infective endocarditis in adults: diagnosis, antimicrobial therapy, and management of complications: a scientific statement for healthcare professionals from the American Heart Association. Circulation. 2015;132(15):1435–1486. doi: 10.1161/CIR.0000000000000296

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