621
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The whole chloroplast genome of Psathyrostachys huashanica (Gramineae), a rare and endangered herb species endemic to China

, , , , &
Pages 622-623 | Received 30 Nov 2018, Accepted 22 Dec 2018, Published online: 15 Jan 2019

References

  • Chevreux B, Pfisterer T, Drescher B, Driesel AJ, Müller WE, Wetter T, Suhai S. 2004. Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs. Genome Res. 14:1147–1159.
  • Du YN. 2010. Drought-resistance preliminary research and cytological identification on the progeny of Triticum-Psathyrostachys. Shaanxi, China: Northwest A&F University.
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach. Nucleic Acids Res. 41:e129.
  • Hang Y, Jin Y, Lu BR. 2004. Genetic diversity of the endangered species Psathyrostachys huashanica in China and its strategic conservation. J Fudan Univ. 43:260–266.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28:1647–1649.
  • Li Q, Liu X, Yue M, Meng QC. 2011. Seed germination and seedling physiological characteristics in Psathyrostachys huashanica Keng under the drought and salt stress. Acta Bot Boreal-Occident Sin. 31:319–324.
  • Li RH, Xia YS, Liu SZ, Sun LL, Guo PG, Miao SY, Chen JH. 2009. CTAB improved method of DNA extraction in plant. Res Exploration Lab. 28:14–16.
  • Patel RK, Jain M. 2012. NGS QC Toolkit: a toolkit for quality control of next generation sequencing data. PLoS One. 7:e30619.
  • Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics. 14:817–818.
  • Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22:2688–2690.