850
Views
6
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitogenome of clam Corbicula fluminea determined usingnext-generation and PacBio sequencing

, , , , , & show all
Pages 1660-1661 | Received 13 Feb 2019, Accepted 06 Apr 2019, Published online: 24 Apr 2019

References

  • Beghelli FGDS, Pompêo MLM, Carlos VM. 2014. First occurrence of the exotic Asian clam Corbicula fluminea (Müller, 1774) in the Jundiaí-Mirim River Basin, SP, Brazil. Ambient Água. 9(3):402.
  • Borgström E, Lundin S, Lundeberg J. 2011. Large scale library generation for high throughput sequencing. PLoS One. 6(4):e19119.
  • Caffrey JM, Evers S, Millane M, Moran H. 2011. Current status of Ireland's newest invasive species – the Asian clam Corbicula fluminea (Müller, 1774). Aquat Invasions. 6:391–399.
  • Chen H, Zha J, Liang X, Bu J, Wang M, Wang Z. 2013. Sequencing and de novo assembly of the Asian clam (Corbicula fluminea) transcriptome using the Illumina GAIIx method. PLoS One. 8(11):e79516.
  • Counts CL. 1981. Corbicula fluminea (Bivalvia: Sphaeriacea) in British Columbia. Nautilus. 95:12–13.
  • English AC, Richards S, Han Y, Wang M, Vee V, Qu J, Qin X, Muzny DM, Reid JG, Worley KC et al. 2012. Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology. PLoS One. 7(11):e47768.
  • Ilarri MI, Souza AT, Antunes C, Guilhermino L, Sousa R. 2014. Influence of the invasive Asian clam Corbicula fluminea (Bivalvia: Corbiculidae) on estuarine epibenthic assemblages. Estuarine Coastal Shelf Sci. 143(4):12–19.
  • Lagesen K, Hallin P, Rodland E, Staerfeldt H, Rognes T, Ussery D. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35(9):3100.
  • Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25(5):955–964.
  • Matthias B, Alexander D, Frank J, Fabian E, Catherine F, Guido F, Joern P, Martin M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319.
  • Mcmahon RF. 1982. The occurrence and spread of the introduced Asiatic freshwater clam, Corbicula fluminea (Müller), in North America 1924–1982. Nautilus. 96:134–141.
  • Molina LM, Pereyra PJ, Carrizo NGM, Abrameto MA. 2015. Here come the clam: Southernmost record worldwide of the Asian clam Corbicula fluminea (Patagonia, Argentina). Russian J Biol Invasions. 6(2):129–134.
  • Mouthon J. 2001. Life cycle and population dynamics of the Asian clam Corbicula fluminea (Bivalvia: Corbiculidae) in the Saone River at Lyon (France). Hydrobiologia. 452(1–3):109–119.
  • Phelps HL. 1994. The Asiatic clam (Corbicula fluminea) invasion and system-level ecological change in the Potomac River Estuary near Washington, D.C. Estuaries. 17(3):614–621.
  • Sambrook J, Russell DW. 2001. Molecular cloning: a laboratory manual. 3rd ed. New York: Cold Spring Harbor Laboratory.
  • Schmidlin S, Baur B. 2007. Distribution and substrate preference of the invasive clam Corbicula fluminea in the river Rhine in the region of Basel (Switzerland, Germany, France). Aquat Sci. 69(1):153–161.
  • Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJ, Birol I. 2009. ABySS: a parallel assembler for short read sequence data. Genome Res. 19:1117–1123.
  • Sousa R, Antunes C, Guilhermino L. 2008. Ecology of the invasive Asian clam Corbicula fluminea (Müller, 1774) in aquatic ecosystems: an overview. Ann Limnol. 44(2):85–94.