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Mitogenome Announcement

Characterization of the complete mitochondrial genome of Pseudozyma sp. JCC207

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Pages 2084-2085 | Received 15 Apr 2019, Accepted 03 May 2019, Published online: 27 May 2019

References

  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19:455–477.
  • Bi G, Mao Y, Xing Q, Cao M. 2018. HomBlocks: a multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching. Genomics. 110:18–22.
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads – a baiting and iterative mapping approach. Nucleic Acids Res. 41:e129–e129.
  • Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955–964.
  • Mi-Hee Chang, Hyeon-Jin Kim, Kwang-Yeop Jahng, Seong-Chool Hong. 2008. The isolation and characterization of Pseudozyma sp. JCC 207, a novel producer of squalene. Applied microbiology and biotechnology 78:963.
  • Nguyen LT, Schmidt HA, Haeseler A, von Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32:268–274.
  • Patel RK, Jain M. 2015. NGS QC toolkit: a platform for quality control of next-generation sequencing data. PloS one 7.2: e30619.