1,701
Views
18
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome of the fall armyworm, Spodoptera frugiperda Smith, 1797 (Lepidoptera; Noctuidae), firstly collected in Korea

, , , , , , ORCID Icon & show all
Pages 3918-3920 | Received 15 Oct 2019, Accepted 27 Oct 2019, Published online: 08 Nov 2019

References

  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120.
  • Ganiger PC, Yeshwanth HM, Muralimohan K, Vinay N, Kumar ARV, Chandrashekara K. 2018. Occurrence of the new invasive pest, fall armyworm, Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae) in the maize fields of Karnataka, India. Current Science 115:621–623.
  • Goergen G, Kumar PL, Sankung SB, Togola A, Tamò M. 2016. First report of outbreaks of the fall armyworm Spodoptera frugiperda (J E Smith) (Lepidoptera, Noctuidae), a New Alien Invasive Pest in West and Central Africa. PLoS One. 11(10):e0165632.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35:1547–1549.
  • Laslett D, Canbäck B. 2008. ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences. Bioinformatics. 24(2):172–175.
  • Li H. 2013. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv preprint arXiv:13033997.
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25(16):2078–2079.
  • Liu Q-N, Chai X-Y, Bian D-D, Ge B-M, Zhou C-L, Tang B-P. 2016. The complete mitochondrial genome of fall armyworm Spodoptera frugiperda (Lepidoptera: Noctuidae). Genes Genom. 38(2):205–216.
  • Montezano DG, Sosa-Gómez DR, Roque-Specht VF. 2018. Host plants of Spodoptera frugiperda (Lepidoptera: Noctuidae) in the Americas. Afr Entomol. 26:16.
  • Park J, Jung JK, Ho Koh Y, Park J, Seo BY. 2019. The complete mitochondrial genome of Laodelphax striatellus (Fallén, 1826) (Hemiptera: Delphacidae) collected in a mid-Western part of Korean peninsula. Mitochondrial DNA Part B. 4(2):2229–2230.
  • Park J, Kwon W, Park J, Kim H-J, Lee B-C, Kim Y, Choi NJ. 2019. The complete mitochondrial genome of Nilaparvata lugens (stål, 1854) captured in Korea (Hemiptera: Delphacidae). Mitochondrial DNA Part B. 4(1):1674–1676.
  • Park J, Xi H, Kim Y, Park J & Lee W (2019) The complete mitochondrial genome of Aphis gossypii Glover, 1877 (Hemiptera: Aphididae) collected in Korean peninsula, Mitochondrial DNA Part B, 4(2):3007–3009.
  • Park J, Xi H, Kwon W, Park C-G, Lee W. 2019. The complete mitochondrial genome sequence of Korean Chilo suppressalis (Walker, 1863) (Lepidoptera: Crambidae). Mitochondrial DNA Part B. 4(1):850–851.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18(5):821–829.
  • Zhao QY, Wang Y, Kong YM, Luo D, Li X, Hao P. 2011. Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study. BMC Bioinform. 12 Suppl 14:S2.