612
Views
3
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The first complete chloroplast genome sequence of the medicinal plant Bupleurum marginatum (Apiaceae)

, , , , &
Pages 1836-1838 | Received 17 Jan 2020, Accepted 11 Feb 2020, Published online: 13 Apr 2020

References

  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120.
  • Burtt BL. 1991. Umbelliferae of Southern Africa: an introduction and annotated check-list. Edinburgh J Bot. 48(2):133–282.
  • Greiner S, Lehwark P, Bock R. 2019. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Res. 47(W1):W59–W64.
  • Guan J, Wang CL, Xiao PG, Guo SX. 2005. Studies on chemical components and pharmacological activities of geobiontic type medicinal plants in Apiaceae family. China J Chin Mater Med. 30(14):1053–1061.
  • Jiangsu New Medical College 1977. Dictionary of Chinese materia medical (in Chinese). Shanghai: Science and Technology Press of Shanghai.
  • Katoh K, Standley D. 2013. MAFFT multiple sequence alignment software version improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Kumar S, Stecher G, Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 33(7):1870–1874.
  • Lowe TM, Chan PP. 2016. tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes. Nucleic Acids Res. 44(W1):W54–57.
  • Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, He G, Chen Y, Pan Q, Liu Y, et al. 2012. SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaSci. 1(1):18.
  • National Pharmacopoeia Committee. 2015. Pharmacopoeia of the People’ s Republic of China (in Chinese). 2015 edition. Beijing: Chemical Industry Press; p. 103.
  • Neves SS, Watson MF. 2004. Phylogenetic relationships in Bupleurum (Apiaceae) based on nuclear ribosomal DNA ITS sequence data. Ann Bot. 93(4):379–398.
  • She ML, Watson MF. 2005. Bupleurum. In: Wu ZY, Raven PH, editors. Flora of China. 14th edn. Beijing: Science Press; p. 60–74.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20(17):3252–3255.
  • Yao YQ, Gao Y, Peng CY, Lu J, Cheng S, Shu JC. 2019. Progress in studies on chemical constituents and pharmacological effects of Bupleurum marginatum. Anhui Med Pharma J. 23:1913–1916.