References
- Cheon KS, Kim KA, Kwak M, Lee B, Yoo KO, Chiang TY. 2019. The complete chloroplast genome sequences of four Viola species (Violaceae) and comparative analyses with its congeneric species. PLoS One. 14(3):e0214162
- Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792–1797.
- Jiang BS, Wen GX, Tang Y, Jiang QY. 2008. Effects of different treatments on cuttage cultivation and growth of Keteleeria calcarea. Guihaia. 28(4):549–552.
- Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis CW, Yi TS, Li DZ. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241
- Li H-T, Yi T-S, Gao L-M, Ma P-F, Zhang T, Yang J-B, Gitzendanner MA, Fritsch PW, Cai J, Luo Y, et al. 2019. Origin of angiosperms and the puzzle of the Jurassic gap. Nat Plants. 5(5):461–470.
- Nie L, Cui Y, Chen X, Xu Z, Sun W, Wang Y, Song J, Yao H. 2020. Complete chloroplast genome sequence of the medicinal plant Arctiumlappa. Genome. 63(1):53–60.
- Qian J, Song J, Gao H, Zhu Y, Xu J, Pang X, Yao H, Sun C, Li X, Li C, et al. 2013. The complete chloroplast genome sequence of the medicinal plant Salvia miltiorrhiza. PLoS One. 8(2):e57607
- Qu XJ, Moore MJ, Li DZ, Yi TS. 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15:50
- Sabater B. 2018. Evolution and function of the chloroplast. Current investigations and perspectives. IJMS. 19(10):3095.
- Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
- Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
- Wu CS, Lai YT, Lin CP, Wang YN, Chaw SM. 2009. Evolution of reduced and compact chloroplast genomes (cpDNAs) in gnetophytes: selection toward a lower-cost strategy. Mol Phylogenet Evol. 52(1):115–124.
- Xie WL, Chai SF, Jiang YS, Tang JM, Chen ZY, Zou R, Wei X. 2017. ISSR analysis on genetic diversity of Keteleeria calcarea. Guihaia. 37(01):36–41.
- Yi DK, Yang JC, So S, Joo M, Kim DK, Shin CH, Lee YM, Choi K. 2016. The complete plastid genome sequence of Abies koreana (Pinaceae: Abietoideae). Mitochondrial DNA Part A. 27(4):2351–2353.
- Zha X, Wang X, Li J, Gao F, Zhou Y. 2020. Complete chloroplast genome of Sophora alopecuroides (Papilionoideae): molecular structures, comparative genome analysis and phylogenetic analysis. J Genet. 99: 13(2020).