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Mitochondrial DNA Part B
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Volume 6, 2021 - Issue 12
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Mitogenome Announcement

Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert

Julio César Chávez-Galarzaa Laboratorio de Investigación Tecnológica en Cambio Climático, Instituto Nacional de Innovación Agraria. Av, Lima, Perú;b Departamento Académico de Ciencias Básicas y Afines, Universidad Nacional de Barranca. Av. Toribio de Luzuriaga 376, Barranca, PerúView further author information
,
Steffany Cardenas-Ninasivinchac Laboratorio de Biología Molecular de Plantas, Facultad de Ciencias Agronómicas, Universidad de Tarapacá, Arica, ChileView further author information
,
Roberto Contrerasd Centro Regional de Investigación y Desarrollo Sustentable de Atacama (CRIDESAT), Universidad de Atacama, Copiapó, ChileORCID Iconhttps://orcid.org/0000-0002-5607-811XView further author information
ORCID Icon,
Rubén Ferro-Mauricioa Laboratorio de Investigación Tecnológica en Cambio Climático, Instituto Nacional de Innovación Agraria. Av, Lima, PerúORCID Iconhttps://orcid.org/0000-0002-1408-3340View further author information
ORCID Icon &
Wilson Huanca-Mamanic Laboratorio de Biología Molecular de Plantas, Facultad de Ciencias Agronómicas, Universidad de Tarapacá, Arica, ChileCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0003-2321-7416View further author information
ORCID Icon
Pages 3375-3377 | Received 26 Aug 2021, Accepted 19 Oct 2021, Published online: 10 Nov 2021

References

  • Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data [Online]. http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477.
  • Darriba D, Taboada G, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods. 9(8):772.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • MMA. 2021. Inventario nacional de especies de Chile. Ministerio del Medio Ambiente. http://especies.mma.gob.cl/CNMWeb/Web/WebCiudadana/ficha_indepen.aspx?EspecieId=927&Version=1
  • Nguyen L-T, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Pinto R. 2005. Tillandsia del Norte de Chile y del extremo sur del Peru. Raquel Pinto (eds). Santiago, Chile: Gas Atacama. p. 15-21.  
  • Pinto R, Barría I, Marquet PA. 2006. Geographical distribution of Tillandsia lomas in the Atacama Desert, northern Chile. J Arid Environ. 65(4):543–552.
  • Rundel PW, Dillon MO. 1998. Ecological patterns in the Bromeliaceae of the Lomas formations of Coastal Chile and Peru. Pl Syst Evol. 212(3–4):261–278.
  • Rundel PW, Palma B, Dillon MO, Sharifi MR, Boonpragob K. 1997. Tillandsia landbeckii in the coastal Atacama Desert of northern Chile. Rev Chil Hist Nat. 70:341–349.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Whaley O, Orellana-Garcia A, Octavio Pecho-Quispe J. 2019. An annotated checklist to vascular flora of the Ica Region, Peru—with notes on endemic species, habitat, climate and agrobiodiversity. Phytotaxa. 389(1):1–125.
  • Zizka G, Schmidt M, Schulte K, Novoa P, Pinto R, König K. 2009. Chilean Bromeliaceae: diversity, distribution and evaluation of conservation status. Biodivers Conserv. 18(9):2449–2471.

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