687
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome of Flemingia macrophylla (Willd.) Prain (Fabaceae) from Guangxi, China

, , , , , & show all
Pages 3378-3380 | Received 31 Aug 2021, Accepted 19 Oct 2021, Published online: 10 Nov 2021

References

  • Amiryousefi A, Hyvönen J, Poczai P. 2018. IRscope: an online program to visualize the junction sites of chloroplast genomes. Bioinformatics. 34(17):3030–3031.
  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, Pyshkin AV, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477.
  • Chen S, Zhou Y, Chen Y, Jia G. 2018. Fastp: an ultra-fast all-in-one fastq preprocessor. Bioinformatics. 34(17):i884–i890.
  • Chinese Pharmacopoeia Commission. 2015. Pharmacopoeia of the People’s Republic of China. Vol. I. Beijing: China Medical Science Press; p. 418.
  • Danecek P, Bonfield JK, Liddle J, Marshall J, Ohan V, Pollard MO, Whitwham A, Keane T, McCarthy SA, Davies RM, et al. 2021. Twelve years of SAMtools and BCFtools. GigaScience. 10(2):1–4.
  • Doyle JJ. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Li H. 2013. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv: 1303.3997v2 [q-bio.GN].
  • Mehmood F, Abdullah Ubaid Z, Bao Y, Poczai P, Mirza B. 2020. Comparative plastomics of Ashwagandha (Withania, Solanaceae) and identification of mutational hotspots for barcoding medicinal plants. Plants. 9(752):1–20.
  • Mehmood F, Abdullah Ubaid Z, Shahzadi I, Ahmed I, Waheed MT, Poczai P, Mirza B. 2020. Plastid genomics of Nicotiana (Solanaceae): insights into molecular evolution, positive selection and the origin of the maternal genome of Aztec tobacco (Nicotiana rustica). PeerJ. 8:e9552.
  • Qu XJ, Moore MJ, Li DZ, Yi TS. 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15:50.
  • Rana Y, Rana VK, Jain VK, Jain B. 2011. Acute toxicity study and analgesic activity of successive extracts of roots of Flemingia macrophylla (Willd.). Int J Pharmacol Res. 2(2):62–67.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Xu LR, Chen DZ, Zhu XY, Huang PH, Wei Z, Sa R, Zhang DX, Bao BJ, Wu DL, Sun H, Gao XF, Liu YX, Chang ZY, Li JQ, Zhang ML, Podlech D, Ohashi H, Larsen K, Welsh SL, Vincent MA, Gilbert MG, Pedley L, Schrire BD, Yakovlev GP, Thulin M, Nielsen IC, Choi B, Turland NJ, Polhill RM, Larsen SS, Hou D, Iokawa Y, Wilmot-Dear CM, Kenicer G, Nemoto T, Lock JM, Salinas AD, Kramina TE, Brach AR, Bartholomew B, Sokoloff DD. 2010. Flora of China. In: Fabaceae (Leguminosae). Vol. 10. Beijing: Science Press; p. 235–236.
  • Zha X, Wang XY, Li JR, Gao F, Zhou YJ. 2020. Complete chloroplast genome of sophora alopecuroides (papilionoideae): molecular structures, comparative genome analysis and phylogenetic analysis. J Genet. 99(1):13.
  • Zhao Y, Zhang R, Jiang KW, Qi J, Hu Y, Guo J, Zhu R, Zhang T, Egan AN, Yi TS, et al. 2021. Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae. Mol Plant. 14(5):748–773.