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Mitogenome Announcement

The complete chloroplast genome sequence and phylogenetic analysis of Sudan grass (Sorghum bicolor subsp. drummondii) cultivar Sa (Poaceae) from Anhui province, China

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Pages 3456-3457 | Received 08 Apr 2021, Accepted 28 Oct 2021, Published online: 23 Nov 2021

References

  • Acevedo A, Simister R, McQueen-Mason SJ, Gómez LD. 2019. Sudangrass, an alternative lignocellulosic feedstock for bioenergy in Argentina. PLOS One. 14(5):e0217435.
  • Chen Y, Chen Y, Shi C, Huang Z, Zhang Y, Li S, Li Y, Ye J, Yu C, Li Z, et al. 2018. SOAPnuke: a MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data. Gigascience. 7(1):1–6.
  • Creamer NG, Baldwin KR. 2000. An evaluation of summer cover crops for use in vegetable production systems in North Carolina. HortScience. 35(4):600–603.
  • De Wet JMJ, Huckabay JP. 1967. The origin of Sorghum bicolor. II. Distribution and domestication. Evolution. 21(4):787–802.
  • Jin J-J, Yu W-B, Yang J-B, Song Y, dePamphilis CW, Yi T-S, Li D-Z. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Luo C, Huang WLue, Sun H, Yer H, Li X, Li Y, Yan B, Wang Q, Wen Y, Huang M, et al. 2021. Comparative chloroplast genome analysis of impatiens species (Balsaminaceae) in the Karst area of China: insights into genome evolution and phylogenomic implications. BMC Genomics. 22(1):571.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Snowden JD. 1936. The cultivated races of Sorghum. Tokyo: Adlard& Son, Ltd.; p. 274.
  • Song Y, Chen Y, Lv J, Xu J, Zhu S, Li M. 2019. Comparative chloroplast genomes of Sorghum species: sequence divergence and phylogenetic relationships. Biomed Res Int. 2019:5046958.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Zhan QW, Zhang TZ, Wang BH, Li JQ. 2008. Diversity comparison and phylogenetic relationships of S. bicolor and S. sudanense as revealed by SSR markers. Plant Sci. 174(1):9–16.