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Mitogenome Announcement

Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China

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Pages 172-174 | Received 16 Aug 2021, Accepted 06 Dec 2021, Published online: 05 Jan 2022

References

  • Castresana J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol. 17: 540–552.
  • Chen YS, Yang QE, Zhu GH. 2003. Acer yangbiense (Aceraceae), a new species from Yunnan, China. Novon. 13(3):296–299.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small amounts of fresh leaf tissue. Phytochem Bull. 19(1):11–15.
  • Fang WP. 1966. Revisio taxorum Aceracearum sinicarum. Acta Phytotax. Sin. 11(2):139–189.
  • Jin JJ, Yu WB, Yang JB, Song Y, de Pamphilis CW, Yi TS, Li DZ. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241.
  • Katoh K, Rozewicki J, Yamada KD. 2019. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform. 20(4):1160–1166.
  • Li J, Stukel M, Bussies P, Skinner K, Lemmon AR, Lemmon EM, Brown K, Bekmetjev A, Swenson NG. 2019. Maple phylogeny and biogeography inferred from phylogenomic data. Jnl of Sytematics Evolution. 57(6):594–606.
  • Nguyen L, Schmidt HA, Von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Qin H, Yang Y, Dong S, He Q, Jia Y, Zhao L, Yu S, Liu H, Liu B, Yan Y, et al. 2017. Threatened species list of China’s higher plants. Biodivers Sci. 25(7):696–744.
  • Qu XJ, Moore MJ, Li DZ, Yi TS. 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15:50.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP, et al. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542.
  • Xu TZ, Chen YS, de Jong PC, Oterdoom HJ, Chang CS. 2008. Aceraceae. In: Wu ZY, Raven PH, editors. Flora of China. Vol. 11. Beijing: Science Press and Missouri Botanical Garden Press.