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Mitochondrial DNA Part B
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Volume 8, 2023 - Issue 1
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Mitogenome Announcement

The complete chloroplast genome and phylogenetic analysis of Christella dentata (Forssk.) Brownsey & Jermy (Thelypteridaceae)

Guoliang Xua Jiangxi Provincial Management Bureau for Jiulian Mountain National Natural Reserve, Longnan, ChinaView further author information
,
Changyou Zhanga Jiangxi Provincial Management Bureau for Jiulian Mountain National Natural Reserve, Longnan, ChinaView further author information
,
Shiou Yih Leeb Faculty of Health and Life Sciences, INTI International University, Nilai, MalaysiaView further author information
,
Zhihui Chenc School of Life Science, State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resource, Sun Yat-sen University, Guangzhou, ChinaView further author information
&
Xiaohui Zengd Jiangxi Provincial Management Bureau for Jinggang Mountain National Nature Reserve, Ji’an, ChinaCorrespondence[email protected]
View further author information
Pages 181-185 | Received 17 May 2022, Accepted 09 Jan 2023, Published online: 25 Jan 2023

References

  • Almeida TE, Hennequin S, Schneider H, Smith AR, Batista JAN, Ramalho AJ, Proite K, Salino A. 2016. Towards a phylogenetic generic classification of Thelypteridaceae: additional sampling suggests alterations of neotropical taxa and further study of paleotropical genera. Mol Phylogenet Evol. 94(Pt B):688–700.
  • Brownsey P, Perrie L. 2016. Re-evaluation of the taxonomic status of Christella dentata (Thelypteridaceae) supports recognition of one species in New Zealand. Tuhinga. 27:50–55.
  • de Lange PJ. 2022. Christella dentata Fact Sheet (content continuously updated). New Zealand Plant Conservation Network; [accessed 2022 Aug 1]. https://www.nzpcn.org.nz/flora/species/christella-dentata/.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Fawcett S, Smith AR. 2021. A generic classification of the Thelypteridaceae. Sida, Botanical Miscellany 59. Fort Worth: Botanical Research Institute of Texas Press.
  • Fawcett S, Smith AR, Sundue M, Burleigh JG, Sessa EB, Kuo LY, Chen C-W, Testo WL, Kessler M, GoFlag Consortium, et al. 2021. A global phylogenomic study of the Thelypteridaceae. Syst Bot. 46:891–915.
  • Jansen RK, Ruhlman TA. 2012. Plastid genomes of seed plants. In: Bock R, Knoop V, editors. Genomics of chloroplasts and mitochondria. Dordrecht: Springer; p. 103–126.
  • Liu C, Shi L, Zhu Y, Chen H, Zhang J, Lin X, Guan X. 2012. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences. BMC Genomics. 13:715.
  • Liu S, Wang Z, Wang H, Su Y, Wang T. 2020. Patterns and rates of plastid rps12 gene evolution inferred in a phylogenetic context using plastomic data of ferns. Sci Rep. 10:1–12.
  • Manhas S, Attri C, Seth MK, Seth A. 2018. Determination of phytochemical constituents and evaluation of antimicrobial activity of medicinal fern Christella dentata. Indian Fern J. 35:169–178.
  • POWO. 2022. Plants of the world online. Facilitated by the Royal Botanic Gardens, Kew; [accessed 2022 Aug 1]. http://www.plantsoftheworldonline.org.
  • PPG I. 2016. A community‐derived classification for extant lycophytes and ferns. J Syst Evol. 54:563–603.
  • Quinlan AR. 2014. BEDTools: the Swiss‐army tool for genome feature analysis. Curr Protoc Bioinformatics. 47:11–12.
  • Ramekar RV, Choi IY, Cheong EJ, Kwak M, Park KC. 2020. The complete chloroplast genome of a Woodwardia japonica. Mitochondrial DNA B Resour. 5(1):102–103.
  • Ramekar RV, Choi IY, Kwak M, Cheong EJ, Park KC. 2020. The complete chloroplast genome of a fern genus Thelypteris interrupta. Mitochondrial DNA B Resour. 5(1):572–573.
  • Rebbas K, Véla E, Bougaham AF, Belharat AK, De Bélair G. 2019. Découverte de Christella dentata (Thelypteridaceae) en Algérie. Flora Mediterr. 29:55–66.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP, et al. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Tanzin R, Rahman S, Hossain MS, Agarwala B, Khatun Z, Jahan S, Mou SM, Rahmatullah M. 2013. Medicinal potential of pteridophytes—an antihyperglycemic and antinociceptive activity evaluation of methanolic extract of whole plants of Christella dentata. Adv Nat Appl Sci. 7:67–73.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45:6–11.
  • Wei R, Yan YH, Harris AJ, Kang JS, Shen H, Xiang QP, Zhang XC. 2017. Plastid phylogenomics resolve deep relationships among eupolypod II ferns with rapid radiation and rate heterogeneity. Genome Biol Evol. 9(6):1646–1657.
  • Wolf PG, Der JP, Duffy AM, Davidson JB, Grusz AL, Pryer KM. 2011. The evolution of chloroplast genes and genomes in ferns. Plant Mol Biol. 76(3–5):251–261.

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