835
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome of the invasive cyanobacteriosponge Terpios hoshinota (Demospongiae, Suberitida, Suberitidae)

, &
Pages 319-323 | Received 04 Jul 2022, Accepted 09 Feb 2023, Published online: 24 Feb 2023

References

  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Putz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319.
  • Chan PP, Lin BY, Mak AJ, Lowe TM. 2021. tRNAscan-SE 2.0: improved detection and functional classification of transfer RNA genes. Nucleic Acids Res. 49(16):9077–9096.
  • Chow SW, Keshavmurthy S, Reimer JD, de Voogd N, Huang H, Wang J-T, Tang S-L, Schupp PJ, Tan CH, Liew H-C, et al. 2022. Population genetics and demography of the coral-killing cyanobacteriosponge, Terpios hoshinota, in the Indo-West Pacific. PeerJ. 10:e13451.
  • Darriba D, Posada D, Kozlov AM, Stamatakis A, Morel B, Flouri T. 2020. ModelTest-NG: a new and scalable tool for the selection of DNA and protein evolutionary models. Mol Biol Evol. 37(1):291–294.
  • de Voogd NJ, Cleary DFR, Dekker F. 2013. The coral-killing sponge Terpios hoshinota invades Indonesia. Coral Reefs. 32(3):755–755.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18–e18.
  • Ekins M, Willis B, Bridge T, Srinivasan M, Rowley S, Hooper J, 2017. The coral killing sponge Terpios hoshinota in Kimbe Bay, Papua New Guinea. Mem Queensl Mus Nat. 60:174–175.
  • Fromont J, Richards ZT, Wilson NG. 2019. First report of the coral-killing sponge Terpios hoshinota Rützler and Muzik, 1993 in Western Australia: a new threat to Kimberley coral reefs? Diversity. 11(10):184.
  • Fujii T, Keshavmurthy S, Zhou W, Hirose E, Chen CA, Reimer JD. 2011. Coral-killing cyanobacteriosponge (Terpios hoshinota) on the great barrier reef. Coral Reefs. 30(2):483–483.
  • Haen KM, Lang BF, Pomponi SA, Lavrov DV. 2007. Glass sponges and bilaterian animals share derived mitochondrial genomic features: a common ancestry or parallel evolution? Mol Biol Evol. 24(7):1518–1527.
  • Katoh K, Standley DM. 2013. MAFFT Multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Kim H, Kim HJ, Jung YH, Yu C, An YR, Han D, Kang DW. 2017. The complete mitochondrial genome of sponge Halichondria okadai (Demospongiae, Suberitida, Halichondriidae) from Korea water. Mitochondr DNA B. 2:873–874.
  • Kim H, Kang DW, Yu C, Jung YH, Yoon M, Kim HJ. 2019. The complete mitochondrial genome of sponge Halichondria sp. (Demospongiae, Suberitida, Halichondriidae) from Dok-do. Mitochondrial DNA Part B. 4(1):1729–1730.
  • Knobloch S, Jóhannsson R, Marteinsson V. 2019. Bacterial diversity in the marine sponge Halichondria panicea from Icelandic waters and host-specificity of its dominant symbiont Candidatus Halichondribacter symbioticus. FEMS Microbiology Ecology. 95(1):220.
  • Kozlov AM, Darriba D, Flouri T, Morel B, Stamatakis A. 2019. RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference. Bioinformatics. 35(21):4453–4455.
  • Liao MH, Tang SL, Hsu CM, Wen KC, Wu H, Chen WM, Wang JT, Meng PJ, Twan WH, Lu CK. 2007. The ‘black disease’ of reef-building corals at Green Island, Taiwan—Outbreak of a Cyanobacteriosponge, Terpios hoshinota (Suberitidae; Hadromerida). Zoological Studies. 46(4):520.
  • Montano S, Chou WH, Chen CA, Galli P, Reimer JD. 2014. First record of the coral-killing sponge Terpios hoshinota in the Maldives and Indian Ocean. bms. 91(1):97–98.
  • Morrow C, Cárdenas P. 2015. Proposal for a revised classification of the Demospongiae (Porifera). Front Zool, 12(1): 1–7.
  • Reimer JD, Mizuyama M, Nakano M, Fujii T, Hirose E. 2011. Current status of the distribution of the coral-encrusting cyanobacteriosponge Terpios hoshinota in southern Japan. Galaxe, J Coral Reef Stud. 13(1):35–44.
  • Rosengarten RD, Sperling EA, Moreno MA, Leys SP, Dellaporta SL. 2008. The mitochondrial genome of the hexactinellid sponge Aphrocallistes vastus: evidence for programmed translational frameshifting. BMC Genomics. 9:33.
  • Rützler K, Muzik K. 1993. Terpios hoshinota, a new cyanobacteriosponge threatening Pacific reefs. Sci Mar. 57:395–403.
  • Salas-Castañeda MR, Castillo-Páez A, Rocha-Olivares A, Cruz-Barraza JA. 2019. The complete mitogenome of the Eastern Pacific sponge Aplysina gerardogreeni (Demospongiae, Verongida, Aplysinidae). Mitochondrial DNA Part B Resour. 4(2):2734–2735.
  • Shi Q, Liu GH, Yan HQ, Zhang HL. 2012. Black disease (Terpios hoshinota): a probable cause for the rapid coral mortality at the Northern reef of Yongxing Island in the South China Sea. Ambio. 41(5):446–455.
  • Stothard P, Wishart DS. 2005. Circular genome visualization and exploration using CGView. Bioinformatics. 21(4):537–539.
  • Thacker RW, Hill AL, Hill MS, Redmond NE, Collins AG, Morrow CC, Spicer L, Carmack CA, Zappe ME, Pohlmann D, et al. 2013. Nearly complete 28S rRNA gene sequences confirm new hypotheses of sponge evolution. Integr Comp Biol. 53(3):373–387.
  • van der Ent E, Hoeksema BW, de Voogd NJ. 2016. Abundance and genetic variation of the coral-killing cyanobacteriosponge Terpios hoshinota in the Spermonde Archipelago, SW Sulawesi, Indonesia. J Mar Biol Ass. 96(2):453–463.
  • Zardoya R. 2020. Recent advances in understanding mitochondrial genome diversity. F1000Res. 9. https://doi.org/10.12688/f1000research.21490.1.