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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 29, 2018 - Issue 2
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Research Article

Genetic structure and historical demography of the blue swimming crab (Portunus pelagicus) from southeastern sea of China based on mitochondrial COI gene

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Pages 192-198 | Received 15 Oct 2016, Accepted 14 Nov 2016, Published online: 30 Dec 2016

References

  • Anderson FE, Bergman A, Cheng SH, Pankey MS, Valinassab T. 2014. Lights out: the evolution of bacterial bioluminescence in Loliginidae. Hydrobiologia. 725:189–203.
  • Cassone BJ, Boulding EG. 2006. Genetic structure and phylogeography of the lined shore crab, Pachygrapsus crassipes, along the northeastern and western Pacific coasts. Mar Biol. 149:213–226.
  • Cheng SH, Anderson FE, Bergman A, Mahardika GN, Muchlisin ZA, Dang BT, Calumpong HP, Mohamed KS, Sasikumar G, Venkatesan V, et al. 2014. Molecular evidence for co-occurring cryptic lineages within the Sepioteuthis cf. lessoniana species complex in the Indian and Indo-West Pacific Oceans. Hydrobiologia. 725:165–188.
  • Dai AY, Yang SL, Song YZ, Chen GX. 1986. Ocean crabs of China. Beijing: Ocean Press.
  • Dhawan RM, Dwivedi SN, Rajamanickam GV. 1976. Ecology of the blue crab Portunus pelagicus (Linnaeus) and its potential fishery in Zuari estuary. Indian J Fish. 23:57–64.
  • Edgar GJ. 1990. Predator-prey interactions in seagrass beds. II. Distribution and diet of the blue manna crab Portunus pelagicus Linnaeus at Cliff Head, Western Australia. J Exp Mar Biol Ecol. 139:23–32.
  • Excoffier L, Smouse PE, Quattro JM. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics. 131:479–491.
  • Excoffier L, Laval G, Schneider S. 2005. Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinform. 1:47–50.
  • Fratini S, Ragionieri L, Cannicci S. 2010. Stock structure and demographic history of the Indo-West Pacific mud crab Scylla serrata. Estuar Coast Shelf Sci. 86:51–61.
  • Fu YX. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics. 147:915–925.
  • Han ZQ, Zhu WB, Zheng W, Li PF, Shui BO. 2015. Significant genetic differentiation between the Yellow Sea and East China Sea populations of cocktail shrimp Trachypenaeus curvirostris revealed by the mitochondrial DNA COI gene. Biochem Syst Ecol. 59:78–84.
  • Johnston D, Harris D, Caputi N, Thomson A. 2011. Decline of a blue swimmer crab (Portunus pelagicus) fishery in Western Australia-History, contributing factors and future management strategy. Fish Res. 109:119–130.
  • Josileen J, Menon NG. 2004. Larval stages of the blue swimmer crab, Portunus pelagicus (Linnaeus, 1758) (Decapoda, Brachyura). Crustaceana. 77:785–803.
  • Josileen J, Menon NG. 2005. Growth of the blue swimmer crab, Portunus pelagicus (Linnaeus, 1758) (Decapoda, Brachyura) in captivity. Crustaceana. 78:1–18.
  • Kangas MI. 2000. Synopsis of the biology and exploitation of the blue swimmer crab, Portunus pelagicus Linnaeus, in Western Australia. Fish Res Rep. 121:1–22.
  • Kimura M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol. 16:111–120.
  • Klinbunga S, Khetpu K, Khamnamtong B, Menasveta P. 2007. Genetic heterogeneity of the blue swimming crab (Portunus pelagicus) in Thailand determined by AFLP analysis. Biochem Genet. 45:725–736.
  • Klinbunga S, Thamniemdee N, Yuvanatemiya V, Khetpu K, Khamnamtong B, Menasveta P. 2010. Species identification of the blue swimming crab Portunus pelagicus in Thai waters using mtDNA and RAPD-derived SCAR markers. Aquaculture. 308:S39–S46.
  • Lai JCY, Peter KLN, Peter JFD. 2010. A revision of the Portunus pelagicus (Linnaeus, 1758) species complex (Crustacea: Brachyura: Portunidae), with the recognition of four species. Raffles B Zool. 58:199–237.
  • Li NS, Zhao SL, Wasiliev B. 2000. Geology of marginal sea in the Northwest Pacific. Harbin: Heilongjiang Education Press.
  • Ma HY, Ma CY, Ma LB. 2011. Population genetic diversity of mud crab (Scylla paramamosain) in Hainan Island of China based on mitochondrial DNA. Biochem Syst Ecol. 39:434–440.
  • Ma HY, Ma CY, Li CH, Lu JX, Zou X, Gong YY, Wang W, Chen W, Ma LB, Xia LJ. 2015. First mitochondrial genome for the red crab (Charybdis feriata) with implication of phylogenomics and population genetics. Sci Rep. 5:11524
  • Nei M. 1987. Molecular evolutionary genetics. New York: Columbia University Press.
  • Meng XL, Jia FL, Liu P, Li J. 2016. The complete mitogenome of blue swimming crab Portunus pelagicus Linnaeus, 1766 (Crustacea: Decapoda: Portunidae). Mitochondrial DNA A DNA Mapp Seq Anal. 27:2789–2790.
  • Polzin T, Daneshmand SV. 2003. On steiner trees and minimum spanning trees in hypergraphs. Oper Res Lett. 31:12–20.
  • Potter IC, Chrystal PJ, Loneragan NR. 1983. The biology of the blue manna crab Portunus pelagicus in an Australian estuary. Mar Biol. 78:75–85.
  • Rogers AR. 1995. Genetic evidence for a Pleistocene population expansion. Evolution. 49:608–615.
  • Rogers AR, Harpending H. 1992. Population growth makes waves in the distribution of pairwise genetic differences. Mol Biol Evol. 9:552–569.
  • Rozas J, Sanchez-Delbarrio JC, Messeguer X, Rozas R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics. 19:2496–2497.
  • Sahoo D, Panda S, Guru BC. 2011. Studies on reproductive biology and ecology of blue swimming crab Portunus pelagicus from Chilika Lagoon, Orissa, India. J Mar Biol Assoc UK. 91:257–264.
  • Schubart CD, Diesel R, Hedges SB. 1998. Rapid evolution to terrestrial life in Jamaican crabs. Nature. 393:363–365.
  • Tajima F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics. 123:585–595.
  • Wang HY, Wu HL, Wang ZW, Wang XY, Wang SC. 2001. Fisheries biology of Portunus pelagicus (Linnaeus, 1758) initialing investigation. Ocean Sci. 25:36–39.
  • Wares JP. 2010. Natural distributions of mitochondrial sequence diversity support new null hypotheses. Evolution. 64:1136–1142.
  • Wu RX, Liang XH, Zhuang ZM, Liu SF. 2012. Mitochondrial COI sequence variation of silver pomfret (Pampus argentus) from Chinese coastal waters. Acta Zootaxon Sin. 37:480–488.
  • Yap ES, Sezmis E, Chaplin JA, Potter IC, Spencer PBS. 2002. Isolation and characterization of microsatellite loci in Portunus pelagicus (Crustacea: Portunidae). Mol Ecol Notes. 2:30–32.
  • Ye YY, Li JJ, Wu CW. 2015. Genetic diversity and population connectivity of the Asiangreen mussel Perna viridis in South China Sea, inferred from mitochondria DNA markers. Biochem Syst Ecol. 61:470–476.
  • Zhang J, Cai Z, Huang L. 2006. Population genetic structure of crimson snapper Lutjanus erythropterus in East Asia, revealed by analysis of the mitochondrial control region. ICES J Mar Sci. 63:693–704.
  • Zheng W, Han ZQ, Chen G, Yu C, Gao T. 2015. Mitochondrial DNA variation in the East China Sea and Yellow Sea populations of swimming crab Ovalipes punctatus. Mitochondr DNA. 26:559–565.
  • Zhou H, Xu J, Yang M, Wu B, Yan B, Xiong Y. 2016. Population genetic diversity of sesarmid crab (Perisesarma bidens) in China based on mitochondrial DNA. Mitochondrial DNA A DNA Mapp Seq Anal. 27:3255–3262.

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