Publication Cover
Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 29, 2018 - Issue 5
178
Views
5
CrossRef citations to date
0
Altmetric
Research Article

Morphological and genetic divergence between lake and river populations of Triplophysa in Ngangtse Co, Tibet

, , , &
Pages 778-784 | Received 18 May 2017, Accepted 17 Jul 2017, Published online: 29 Jul 2017

References

  • Bandelt HJ, Forster P, Röhl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol. 16:37–48.
  • Berner D, Adams DC, Grandchamp AC, Hendry AP. 2008. Natural selection drives patterns of lake–stream divergence in stickleback foraging morphology. J Evolution Biol. 21:1653–1665.
  • Chen Y, He D, Cao W, Duan Z. 2001. Growth of selincuo schizothoracini (Gymnocypris selincuoensis) in selincuo lake, tibeten platean. Acta Zoologica Sinica. 48:667–676.
  • Excoffier L, Lischer HE. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour. 10:564–567.
  • Hendry AP, Taylor EB, McPhail JD. 2002. Adaptive divergence and the balance between selection and gene flow: lake and stream stickleback in the Misty system. Evolution. 56:1199–1216.
  • Hebert PDN, Ratnasingham S, de Waard JR. 2003. Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc R Soc Lond B. 270:S96–S99.
  • Hendry AP, Taylor EB. 2004. How much of the variation in adaptive divergence can be explained by gene flow? an evaluation using lake-stream stickleback pairs. Evolution. 58:2319–2331.
  • He D, Chen Y. 2006. Biogeography and molecular phylogeny of the genus Schizothorax (Teleostei: Cyprinidae) in China inferred from cytochrome b sequences. J Biogeogr. 33:1448–1460.
  • He D, Chen Y. 2007. Molecular phylogeny and biogeography of the highly specialized grade schizothoracine fishes (Teleostei: Cyprinidae) inferred from cytochrome b sequences. Chinese Sci Bull. 52:777–788.
  • He D, Chen Y, Liu C, Tao J, Ding C, Chen Y. 2016. Comparative phylogeography and evolutionary history of schizothoracine fishes in the Changtang Plateau and their implications for the lake level and Pleistocene climate fluctuations. Ecol Evol. 6:656–674.
  • Kumar R, Gopalakrishnan A, Divya PR, Basheer VS, Singh RK, Mohindra V, Lal KK, Jena JK. 2016. Population genetic structure of Macrobrachium rosenbergii (Palaemonidae) from Indian waters using mitochondrial ATPase 6/8 gene. Mitochondrial DNA Part A. 28:602–605.
  • Lenormand T. 2002. Gene flow and the limits to natural selection. Trends Ecol Evol. 17:183–189.
  • Librado P, Rozas J. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics. 25:1451–1452.
  • Ma R, Yang G, Duan H, Jiang J, Wang S, Feng X, Li A, Kong F, Xue B, Wu J, et al. 2011. China’s lakes at present: number, area and spatial distribution. Sci China Earth Sci. 54:283–289.
  • Moore JS, Gow JL, Taylor EB, Hendry AP. 2007. Quantifying the constraining influence of gene flow on adaptive divergence in the lake-stream three spine stickleback system. Evolution. 61:2015–2026.
  • Neat FC, Lengkeek W, Westerbeek EP, Laarhoven B, Videler JJ. 2003. Behavioural and morphological differences between lake and river populations of Salaria fluviatilis. J Fish Biol. 63:374–387.
  • Reid K, Hoareau TB, Graves JE, Potts WM, dos Santos SMR, Klopper AW, Bloomer P. 2016. Secondary contact and asymmetrical gene flow in a cosmopolitan marine fish across the Benguela upwelling zone. Heredity. 117:307–315.
  • Roesti M, Hendry AP, Salzburger W, Berner D. 2012. Genome divergence during evolutionary diversification as revealed in replicate lake-stream stickleback population pairs. Mol Ecol. 21:2852–2862.
  • Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 19:1572–1574.
  • Shen J. 2013. Spatiotemporal variations of Chinese lakes and their driving mechanisms since the Last Glacial maximum: a review and synthesis of lacustrine sediment archives. Chinese Sci Bull. 58:17–31.
  • Slatkin M, Barton NH. 1989. A comparison of three indirect methods for estimating average levels of gene flow. Evolution. 43:1349–1368.
  • Taggart JB, Hynes RA, Prodöuhl PA, Ferguson A. 1992. A simplified protocol for routine total DNA isolation from salmonid fishes. J Fish Biol. 40:963–965.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.
  • Theis A, Ronco F, Indermaur A, Salzburger W, Egger B. 2014. Adaptive divergence between lake and stream populations of an East African cichlid fish. Mol Ecol. 23:5304–5322.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673–4680.
  • Thompson CE, Taylor EB, McPhail JD. 1997. Parallel evolution of lake-stream pairs of threespine sticklebacks (Gasterosteus) inferred from mitochondrial DNA variation. Evolution. 51:1955–1965.
  • Wang Y, Shen Y, Feng C, Zhao K, Song Z, Zhang Y, Yang L, He S. 2016. Mitogenomic perspectives on the origin of Tibetan loaches and their adaptation to high altitude. Sci Rep. 6:29690.
  • Wu Y, Wu C. 1992. The fishes of the Qinghai-Xizang plateau. Chengdu (China): Sichuan Publishing House of Science & Technology.
  • Yi S, Zhong J, Huang S, Wang S, Wang W. 2017. Morphological comparison and DNA barcoding of four closely related species in the genera Misgurnus and Paramisgurnus (Cypriniformes: Cobitidae). Biochem Syst Ecol. 70:50–59.
  • Zheng M. 1997. An introduction to saline lakes on the Qinghai-Tibet plateau. In: Dumont HJ, Werger MJA, editors. Monograghiae biologicae, vol. 76. Amsterdam (the Netherlands): Kluwer Academic Publishers.
  • Zheng LP, Du LN, Chen XY, Yang J. 2010. A new species of the genus Triplophysa (Nemacheilinae: Balitoridae), Triplophysa jianchuanensis sp. nov, from Yunnan, China. Environ Biol Fish. 89:21–29.
  • Zhu SQ. 1989. The loaches of the subfamily Nemacheilinae in China (Cypriniformes: Cobitidae). Nanjing (China): Jiangsu Science and Technology Press.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.