Species composition of the genus Scombrops (Teleostei, Scombropidae) in the waters around the Japanese Archipelago: detection of a cryptic species

References

• Battaglia P, Malara D, Ammendolia G, Romeo T, Andaloro F. 2015. Relationships between otolith size and fish length in some mesopelagic teleosts (Myctophidae, Paralepididae, Phosichthyidae and Stomiidae). J Fish Biol. 87:774–782.
   PubMed Web of Science ®Google Scholar
• Battaglia P, Malara D, Romeo T, Andaloro F. 2010. Relationships between otolith size and fish size in some mesopelagic and bathypelagic species from the Mediterranean Sea (Strait of Messina, Italy). Sci Mar. 74:605–612.
   Web of Science ®Google Scholar
• Bernardi G, Bucciarelli G, Costagliola D, Robertson DR, Heiser JB. 2004. Evolution of coral reef fish Thalassoma spp. (Labridae). 1. Molecular phylogeny and biogeography. Mar Biol. 144:369–375.
   Web of Science ®Google Scholar
• Chen Y, Jackson DA, Harvey HH. 1992. A comparison of von Bertalanffy and polynomial functions in modelling fish growth data. Can J Fish Aquat Sci. 49:1228–1235.
   Web of Science ®Google Scholar
• Gamboa DA. 1991. Otolith size versus weight and body-length relationships for eleven fish species of Baja California, Mexico. Fish Bull US. 89:701–706.
   Web of Science ®Google Scholar
• Gibbard PL, Head MJ, Walker MJC, and the Subcommission on Quaternary Stratigraphy. 2009. Formal ratification of the quaternary system/period and the pleistocene series/Epoch with a base at 2.58 Ma. J Quat Sci. 25:96–102.
   Web of Science ®Google Scholar
• Hayashi K. 2002. Scombropidae. In: Nakabo T, editor. Fishes of Japan with pictorial keys to the species. 2nd ed. Tokyo: Tokai University Press; p. 786 (in Japanese).
   Google Scholar
• Heemstra PC. 1986. Scombropidae. In: Smith MM, Heemstra PC, editors. Smiths’ sea fishes. Berlin: Springer-Verlag; p. 563.
   Google Scholar
• Hewitt G. 2000. The genetic legacy of the Quaternary ice ages. Nature. 405:907–913.
   PubMed Web of Science ®Google Scholar
• Hewitt GM. 2004. Genetic consequences of climatic oscillations in the Quaternary. Philos T Roy Soc B. 359:183–195.
   PubMed Web of Science ®Google Scholar
• Itoi S, Odaka J, Noguchi S, Noda T, Yuasa K, Muraki T, Tanabe T, Takai N, Yoshihara K, Sugita H. 2011. Genetic homogeneity between adult and juvenile populations of Scombrops gilberti (Percoid, Scombropidae) in the Pacific Ocean off the Japanese Islands. Fish Sci. 77:975–981.
   Web of Science ®Google Scholar
• Itoi S, Odaka J, Yuasa K, Akeno S, Nakajima A, Suenaga A, Noda T, Akimoto S, Myojin T, Ikeda Y, et al. 2010. Distribution and species composition of juvenile and adult scombropids (Teleostei, Scombropidae) in Japanese coastal waters. J Fish Biol. 76:369–378.
   PubMed Web of Science ®Google Scholar
• Itoi S, Takai N, Naya S, Dairiki K, Yamada A, Akimoto S, Yoshihara K, Sugita H. 2008. A species identification method for Scombrops boops and Scombrops gilberti based on polymerase chain reaction-restriction fragment length polymorphism analysis of mitochondrial DNA. Fish Sci. 74:503–510.
   Web of Science ®Google Scholar
• Mochizuki K. 1977. Systematics, distribution, growth and reproduction of scombropid fishes [PhD dissertation]. Tokyo University.
   Google Scholar
• Mochizuki K. 1979. Age and growth of the two Japanese scombropids, Scombrops boops and S. gilberti. Jpn J Ichthyol. 26:62–68.
   Web of Science ®Google Scholar
• Mochizuki K. 1984. Family scombropidae. In: Masuda H, Amaoka K, Araga C, Uyeno T, Yoshino T, editors. The fishes of the Japanese archipelago. Tokyo: Tokai University Press; p. 152.
   Google Scholar
• Mochizuki Y, Yamada R, Shishido H, Masuda Y, Nakai S, Takai N, Itoi S, Sugita H. 2017. Complete mitochondrial genome of an undescribed gnomefish of the genus Scombrops (Teleostei, Scombropidae) from southern waters off Kyushu Island, Japan. Mitochondrial DNA B. 2:106–108.
   PubMed Web of Science ®Google Scholar
• Noguchi S, Itoi S, Takai N, Noda T, Myojin T, Yoshihara K, Sugita H. 2012. Population genetic structure of Scombrops boops (Percoid, Scombropidae) around the Japanese archipelago inferred from the cytochrome b gene sequence in mitochondrial DNA. Mitochondrial DNA. 23:233–239.
   Web of Science ®Google Scholar
• Poey F. 1860. Poissons de Cuba. Mem Hist Nat Isla Cuba. 2:115–356.
   Google Scholar
• Sato S. 1940. Supplementary notes on the fishes from Akkeshi Bay. J Fac Sci Hokkaido Imp Univ Ser VI Zool. 7:99–106.
   Google Scholar
• Shao K-T. 1987. First record of Scombropidae (Pisces: Percoidei) from Taiwan. Bull Inst Zool Acad Sin. 26:191–194.
   Google Scholar
• Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R, McWilliam H, Remmert M, Söding J, et al. 2011. Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol Syst Biol. 7:539.
   PubMed Web of Science ®Google Scholar
• Strelcheck AJ, Fitzhugh GR, Coleman FC, Koenig CC. 2003. Otolith–fish size relationship in juvenile gag (Mycteroperca microlepis) of the eastern Gulf of Mexico: a comparison of growth rates between laboratory and field populations. Fish Res. 60:255–265.
   Web of Science ®Google Scholar
• Takai N, Kozuka Y, Tanabe T, Sagara Y, Ichihashi M, Nakai S, Suzuki M, Mano N, Itoi S, Asahina K, et al. 2014. Habitat use of the gnomefishes Scombrops boops and S. gilberti in the northwestern Pacific Ocean in relation to reproductive strategy. Aquat Biol. 21:109–120.
   Web of Science ®Google Scholar
• Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.
   PubMed Web of Science ®Google Scholar
• Tsunashima T, Itoi S, Abe K, Takigawa T, Inoue S, Kozen T, Ono N, Noguchi S, Nakai S, Takai N, et al. 2016a. The complete mitochondrial genome of the gnomefish Scombrops boops (Teleostei, Perciformes, Scombropidae) from the Pacific Ocean off the Japanese Islands. Mitochondrial DNA A. 27:785–786.
   PubMed Web of Science ®Google Scholar
• Tsunashima T, Yamada R, Abe K, Noguchi S, Itoi S, Nakai S, Takai N, Sugita H. 2016b. Phylogenetic position of Scombropidae within teleostei: the complete mitochondrial genome of the gnomefish, Scombrops gilberti. Mitochondrial DNA A. 27:3446–3448.
   PubMed Web of Science ®Google Scholar
• Yasuda F, Mochizuki K, Kawajiri M, Nose Y. 1971. On the meristic and morphometric differences between Scombrops boops and S. gilberti. Jpn J Ichthyol. 18:118–124.
   Google Scholar