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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 32, 2021 - Issue 1
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Research Articles

Phylogeography, genetic diversity and population structure of the freshwater stingray, Paratrygon aiereba (Müller & Henle, 1841) (Myliobatiformes: Potamotrygonidae) in the Colombian Amazon and Orinoco basins

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Pages 20-33 | Received 09 Aug 2020, Accepted 28 Oct 2020, Published online: 21 Dec 2020

References

  • Adnet S, Salas Gismondi R, Antoine P-O. 2014. Comparisons of dental morphology in river stingrays (Chondrichthyes: Potamotrygonidae) with new fossils from the middle eocene of Peruvian Amazonia Rekindle debate on their evolution. Naturwissenschaften. 101(1):33–45.
  • Aguilar F, Chalén X, Villón C. 2005. Plan De Acción Nacional De Tiburones. Vol. 23. Instituto Nacional de Pesca. Quito, Ecuador.
  • Albert JS, Petry P, Reis RE. 2011. Major biogeographic and phylogenetic patterns. In: Albert R, Reis J, editors. Historical biogeography of neotropical freshwater fishes. Berkeley (CA): University of California Press; p. 21.
  • Albert JS, Carvalho TP. 2011. Neogene assembly of modern faunas. In: Albert R, Reis JS, editors. Historical biogeography of neotropical freshwater fishes. Berkeley (CA): University of California Press; p. 119.
  • Almeida MP, Borges Barthem R, Viana a. S, Charvet-Almeida P. 2009. Factors affecting the distribution and abundance of freshwater stingrays (Chondrichthyes: Potamotrygonidae) at Marajó Island, Mouth of the Amazon River. Pan-Am J Aquat Sci. 4:1–11.
  • Antonio RR, Antonio Agostinho A, Pelicice FM, Bailly D, Okada EK, Dias JHP. 2007. Blockage of migration routes by dam construction: can migratory fish find alternative routes? Neotrop Ichthyol. 5(2):177–184.
  • Araújo MGLD, Rincón G. 2009. Paratrygon Ajereba. The IUCN red list of threatened species. [Retrieved 2019 Mar 20]. www.iucnredlist.org.
  • Araújo MLG, Charvet-Almeida P, Almeida MP, Pereira H. 2004. Freshwater Stingrays (Potamotrygonidae): Status, Conservation and Challenges. Information document AC, Brazil. 20(8):1-6.
  • Aschliman NC , Claeson KM , McEachran JD. 2012. Filogenia de batoidea. Biología de tiburones y sus parientes. 2ª ed.  (Eds Carrier JC, Musick JA y Heithaus MR.). CRC Press. Boca Raton, Florida. p. 57-95.
  • Aschliman NC, Nishida M, Miya M, Inoue JG, Rosana KM, Naylor GJP. 2012. Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea). Mol Phylogenet Evol. 63(1):28–42.
  • Barbarino A, Lasso C. 2009. La Pesca Comercial de La Raya Manta Paratrygon Aiereba (Müller & Henle, 1841)(Myliobatiformes, Potamotrygonidae), En El Rio Apure, Venezuela. Acta Apuroquia. 1(1):24–31.
  • Barbarino A, Lasso CA. 2005. Pesquería y Aspectos Biológicos de La Raya Manta Paratrygon Aiereba (Müller y Henle, 1841) (Myliobatiformes, Potamotrygonidae), En El Río Apure (Venezuela). Memoria de La Fundación La Salle de Ciencias Naturales. 11(163):93–108.
  • Barraclough TG, Vogler AP. 2000. Detecting the geographical pattern of speciation from species-level phylogenies. Am Nat. 155(4):419–434.
  • Barragán-Barrera DC, May-Collado LJ, Tezanos-Pinto G, Islas-Villanueva V, Correa-Cárdenas CA, Caballero S. 2017. High genetic structure and low mitochondrial diversity in bottlenose dolphins of the archipelago of Bocas Del Toro, Panama: a population at risk? PLoS One. 12(12):e0189370.
  • Bloom DD, Lovejoy NR. 2011. The biogeography of marine incursions in South America. In: JAlbert E, Roberts JS, editors. The historical biogeography of Neotropical fishes. University of California Press, Berkely and Los Angeles, CA, USA. p. 137–144.
  • Bouckaert R, Heled J, Kühnert D, Vaughan T, Wu C-H, Xie D, Suchard MA, Rambaut A, Drummond AJ. 2014. BEAST 2: a software platform for Bayesian evolutionary analysis. PLoS Comput Biol. 10(4):e1003537.
  • Bustamante CC, Sánchez CL. 2010. Talla mínima de captura para las especies de la familia Potamotrygonidae comercializadas como peces ornamentales en Colombia. Concepto Técnico. Ministerio de Agricultura y Desarrollo Rural, República de Colombia. INCODER- Instituto Colombiano de Desarrollo Rural. 8.
  • Caballero S, Correa-Cárdenas CA, Trujillo F. 2015. Population structure and genetic diversity of the endangered South American Giant Otter (Pteronura brasiliensis) from the Orinoco Basin in Colombia: management implications and application to current conservation programs. JHERED. 106(S1):469–477.
  • Caldas JA, Castro-González E, Puentes V, Rueda M, Lasso C, Duarte LO, Grijalba-Bendeck M, Gómez F, Navia AF, Mejía-Falla PA, et al. 2010. Plan de Acción Nacional para la Conservación y Manejo de Tiburones, Rayas y Quimeras de Colombia (PAN-Tiburones Colombia). Instituto Colombiano Agropecuario, Secretaria Agricultura y Pesca San Andrés Isla, Ministerio de Ambiente, Vivienda y Desarrollo Territorial, Instituto de Investigaciones Marinas y Costeras, Instituto Alexander Von Humboldt, Universidad del Magdalena, Universidad Jorge Tadeo Lozano, Pontificia Universidad Javeriana, Fundación SQUALUS, Fundación Malpelo y otros Ecosistemas Marinos, Conservación Internacional, WWF Colombia. Bogotá, Colombia 70.
  • Cardeñosa D, Hyde J, Caballero S. 2014. Genetic diversity and population structure of the pelagic thresher shark (Alopias pelagicus) in the Pacific Ocean: evidence for two evolutionarily significant units. PLoS One. 9(10):e110193.
  • Carvalho M. R d, Maisey JG, Grande L. 2004. Freshwater stingrays of the green river formation of Wyoming (early Eocene), with the description of a new genus and species and an analysis of its phylogenetic relationships (Chondrichthyes: Myliobatiformes). Bull Am Mus Nat Hist. 284(284):1–136.
  • Carvalho M. R d, Lovejoy NR. 2011. Morphology and phylogenetic relationships of a remarkable new genus and two new species of Neotropical freshwater stingrays from the Amazon Basin (Chondrichthyes: Potamotrygonidae). Zootaxa. 2776(1):13.
  • Carvalho M. R d, Loboda TS, Da Silva JPCB. 2016. A new subfamily, styracurinae, and new genus, Styracura, for Himantura schmardae (Werner, 1904) and Himantura pacifica (Beebe & Tee-Van, 1941) (Chondrichthyes: Myliobatiformes). Zootaxa. 4175(3):201–221.
  • Castillo-Olguín E, Uribe-Alcocer M, Díaz-Jaimes P. 2012. Evaluación de La Estructura Genética Poblacional de Sphyrna lewini Para La Identificación de Unidades de Conservación En El Pacífico Mexicano. CiencMar. 38(4):635–652.
  • Cerutti-Pereyra F, Meekan MG, Wei N-WV, O'Shea O, Bradshaw CJA, Austin CM. 2012. Identification of rays through DNA barcoding: an application for ecologists. PLoS One. 7(6):e36479.
  • Charvet-Almeida P, de Araújo MLG, de Almeida MP. 2005. Reproductive aspects of freshwater stingrays (Chondrichthyes: Patamotrygonidae) in the Brazilian Amazon Basin. J Northw Atl Fish Sci. 35(February):165–171.
  • Clement M, Posada D, Crandall KA. 2000. TCS: a computer program to estimate gene genealogies. Mol Ecol. 9(10):1657–1659.
  • Corander J, Tang J. 2007. Bayesian analysis of population structure based on linked molecular information. Math Biosci. 205(1):19–31.
  • Corander J, Marttinen P, Sirén J, Tang J. 2013. BAPS: Bayesian Analysis of Population Structure. Program manual. Ver. 6.0 Department of Mathematics and statistics, University of Helsinki, Helsinki, Finland. p. 1–28.
  • Dawson MN, Louie KD, Barlow M, Jacobs DK, Swift CC. 2002. Comparative phylogeography of sympatric sister species, Clevelandia Ios and Eucyclogobius Newberryi (Teleostei, Gobiidae), across the California transition zone. Mol Ecol. 11(6):1065–1075.
  • Domínguez-Domínguez O, Vázquez-Domínguez E. 2009. Filogeografía: Aplicaciones En Taxonomía y Conservación. Anim Biodiv Conserv. 32(1):59–70.
  • Duncan WP. 2016. Ecofisiologia Das Raias de Agua Doce (Potamotrygonidae): Mecanismos de Interacao Organismo-Ambiente. In: Lasso M, Rosa CA, Morales-Betancourt RS, Garrone-Neto MA, Carvalho D, editors. XV. Rayas de agua dulce (Potamotrygonidae) de Suramérica. Parte II: Colombia, Brasil, Perú, Bolivia, Paraguay, Uruguay y Argentina. Bogotá DC (Colombia): Serie Editorial Recursos Hidrobiológicos y Pesqueros Continentales de Colombia. Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH); p. 45–64.
  • Duncan WP, Fernandes MN. 2010. Physiochemical characterization of the white, black, and clearwater rivers of the Amazon Basin and its implications on the distribution of freshwater stingrays (Chondrichthyes, Potamotrygonidae). Pan-Am J Aquat Sci. 5(3):454–464.
  • Duncan WP, Costa OTF, Araújo MLG, Fernandes MN. 2009. Ionic regulation and Na(+)-K(+)-ATPase activity in gills and kidney of the freshwater stingray Paratrygon Aiereba living in white and blackwaters in the Amazon Basin. J Fish Biol. 74(4):956–960.
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792–1797.
  • Escobar LMD, Andrade-López J, Farias IP, Hrbek T. 2015. Delimiting evolutionarily significant units of the fish, Piaractus brachypomus (Characiformes: Serrasalmidae), from the Orinoco and Amazon River Basins with insight on routes of historical connectivity. J Hered. 106(S1):428–438.
  • Escovar-Fadul X, Caballero S, Espinoza, Bessudo S. 2017. Population structure and genetic diversity of the blue shark Prionace glauca in the eastern tropical pacific: evidence and conservation implications from mitochondrial DNA and microsatellite analyses. Oceanogr Fish Open Access J. 2(5):15–17.
  • Excoffier L, Lischer HEL. 2010. Arlequin suite Ver 3.5: a new series of programs to perform population genetics analyses under linux and windows. Mol Ecol Resour. 10(3):564–567.
  • Frank P, Hoorn C. 2011. Geological development of Amazon and Orinoco Basins. In: Albert R, Reis J, editors. Historical biogeography of Neotropical freshwater fishes. Berkeley (CA): University of California Press; p. 59–65.
  • Frederico RG, Farias IP, Lúcia Góes de Araújo M, Charvet-Almeida P, Alves-Gomes JA. 2012. Phylogeography and conservation genetics of the amazonian freshwater stingray Paratrygon aiereba Müller & Henle, 1841 (Chondrichthyes: Potamotrygonidae). Neotrop Ichthyol. 10:71–80.
  • Garcia DA, Lasso CA, Morales M, Caballero SJ. 2016. Molecular systematics of the freshwater stingrays (Myliobatiformes: Potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribbean, and Maracaibo Basins (Colombia - Venezuela): evidence from three mitochondrial genes. Mitochondrial DNA A DNA Mapp Seq Anal. 27(6):4479–4491.
  • García VB, Lucifora LO, Myers RA. 2008. The importance of habitat and life history to extinction risk in sharks, skates, rays and chimaeras. Proc Biol Sci. 275(1630):83–89.
  • Garrone-Neto D, Sanches Uieda V. 2012. Activity and habitat use of two species of stingrays (Myliobatiformes: Potamotrygonidae) in the Upper Paraná River Basin, Southeastern Brazil. Neotrop Ichthyol. 10(1):81–88.
  • Gonzalez C, Gallagher AJ, Caballero S. 2019. Conservation genetics of the bonnethead shark Sphyrna tiburo in Bocas Del Toro, Panama: preliminary evidence of a unique stock. PLoS One. 14(8):e0220737.
  • Hoelzel AR. 1998. Genetic structure of cetacean populations in Sympatry, Parapatry, and mixed assemblages: implications for conservation policy. J Hered. 89(5):451–458.
  • Hoorn C, Wesselingh FP, ter Steege H, Bermudez MA, Mora A, Sevink J, Sanmartín I, Sanchez-Meseguer A, Anderson CL, Figueiredo JP, et al. 2010. Amazonia through time: andean uplift, climate change, landscape evolution, and biodiversity. Science (New York, N.Y.). 330(6006):927–931.
  • Hrbek T, Farias IP, Crossa M, Sampaio I, Porto JIR, Meyer A. 2005. Population genetic analysis of Arapaima gigas, one of the largest freshwater fishes of the Amazon Basin: implications for its conservation. Anim Conserv. 8(3):297–308.
  • Hubert N, Duponchelle F, Nuñez J, Rivera R, Renno JF. 2006. Evidence of reproductive isolation among closely related sympatric species of Serrasalmus (Ostariophysii, Characidae) from the Upper Madeira River, Amazon, Bolivia. J Fish Biology. 69(sa):31–51.
  • Hubert N, Renno J-F. 2006. Historical biogeography of South American Freshwater Fishes. J Biogeography. 33(8):1414–1436.
  • IUCN. 2020. Manzana Ray (Paratrygon Aiereba). [Retrieved 2020 Mar 29]. https://www.iucnredlist.org/species/161588/124329685.
  • Jaramillo C, Romero I, D'Apolito C, Bayona G, Duarte E, Louwye S, Escobar J, Luque J, Carrillo-Briceño JD, Zapata V, et al. 2017. Miocene flooding events of western Amazonia. Sci Adv. 3(5):e1601693–e1601693.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Kirchhoff KN, Hauffe T, Stelbrink B, Albrecht C, Wilke T. 2017. Evolutionary bottlenecks in brackish water habitats drive the colonization of fresh water by stingrays. J Evol Biol. 30(8):1576–1591.
  • Lasso CA. 2016. Aspectos Sobre La Historia Natural de Las Rayas de Agua Dulce (Potamotrygonidae) En El Área de Influencia de Los Municipios de Puerto Carreño (Vichada) e Inírida (Guainía), Orinoquia Colombiana. In Lasso C, editor. XV. Rayas de agua dulce (Potamotrygonidae) de Suramérica. Parte II: Colombia, Brasil, Perú, Bolivia, Paraguay, Uruguay y Argentina. Bogotá DC (Colombia): Serie Editorial Recursos Hidrobiológicos y Pesqueros Continentales de Colombia. Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH); p. 325–356.
  • Lasso CA, Rosa RR, Sánchez-Duarte P, Morales-Betancourt MA, Agudelo-Córdoba E. 2013. IX. Rayas de Agua Dulce (Potamotrygonidae) de Suramérica.Parte I. Colombia, Venezuela, Ecuador, Perú, Brasil,Guyana, Surinam y Guayana Francesa: Diversidad, Bioecología, Uso y Conservación. Bogotá DC (Colombia): Serie Editorial Recursos Hidrobiológicos y Pesqueros Continentales de Colombia. Instituto de Investigación de los Recursos Biológicos Alexander von Humboldt (IAvH); p. 368.
  • Lasso CA, Sánchez-Duarte P, Barbarino A, Morales-Betancourt MA, Martínez-Arroyave , Lasso-Alcalá O. 2013. Paratrygon aiereba (Orinoco). In: Lasso C, Rosa R, Sánchez-Duarte P, Morales-Betancourt M, and Agudelo-Córdoba E, editors IX. Rayas de agua dulce (Potamotrygonidae) de Suramérica.Parte I. Colombia, Venezuela, Ecuador, Perú, Brasil, Guyana, Surinam y Guayana Francesa: diversidad, bioecología, uso y conservación. Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH). Bogotá, Colombia. p. 137–150.
  • Loboda TS. 2016. Taxonomic and Morphological Revision of the Genus Paratrygon duméril (1865) (Chondrichthyes: Myliobatiformes: Potamotrygonidae). Doctoral Thesis. Instituto de Biociências, Universidade de São Paulo (USP), São Paulo, Brazil. p. 454. https://www.teses.usp.br/teses/disponiveis/41/41133/tde-19072016-114714/en.php
  • Lopez-Fernandez H, Albert JS. 2011. Paleogene radiations. In: Albert R, Reis JS, editors. Historical biogeography of Neotropical freshwater fishes. Berkeley (CA): University of California Press; p. 407.
  • Lovejoy NR. 1996. Systematics of myliobatoid elasmobranchs: with emphasis on the phylogeny and historical biogeography of neotropical freshwater stingrays (Potamotrygonidae: Rajiformes). Zool J Linn Soc. 117(3):207–257.
  • Lovejoy NR. 1997. Stingrays, parasites, and neotropical biogeography: a closer look at brooks et al.’s hypotheses concerning the origins of neotropical freshwater rays (Potamotrygonidae). Syst Biol. 46(1):218–230.
  • Lovejoy NR, Bermingham E, Martin AP. 1998. Marine incursion into South America. Nature. 396(6710):421–422.
  • Lovejoy NR, Albert JS, Crampton WGR. 2006. Miocene marine incursions and marine/freshwater transitions: evidence from neotropical fishes. J South Am Earth Sci. 21(1–2):5–13.
  • Lovejoy NR, Araújo MLG. 2000. Molecular systematics, biogeography and population structure of neotropical freshwater needlefishes of the genus potamorrhaphis. Mol Ecol. 9(3):259–268.
  • Lucifora LO, Balboni L, Scarabotti PA, Alonso FA, Sabadin DE, Solari A, Vargas F, Barbini SA, Mabragaña E, Díaz de Astarloa JM. 2017. Decline or stability of obligate freshwater elasmobranchs following high fishing pressure. Biol Conserv. 210:293–298.
  • Lucifora LO, de Carvalho MR, Kyne PM, White WT. 2015. Freshwater sharks and rays. Curr Biol. 25(20):R971–R973.
  • Machado VN, Collins RA, Ota RP, Andrade MC, Farias IP, Hrbek T. 2018. One thousand DNA barcodes of piranhas and pacus reveal geographic structure and unrecognised diversity in the Amazon. Sci Rep. 8(1):8387.
  • Maddison DR, Maddison WP. 2000. MacClade 4: analysis of phylogeny and character evolution. Sunderland (MA): Sinauer Associates Inc Publishers.
  • Maddison WP, Maddison DR. 1989. Interactive analysis of phylogeny and character evolution using the computer program MacClade. Folia Primatol (Basel). 53(1–4):190–202.
  • Mancera-Rodríguez NJ, Álvarez-León R. 2008. Comercio de Peces Ornamentales En Colombia. Acta Biológica Colombiana. 13(1). p. 23-52.
  • Marques FPL. 2000. Evolution of neotropical freshwater stingrays and their parasites: taking into account space and time [Graduate Department of Zoology PhD]. University of Toronto, Canada p. 325.
  • Martin RA. 2005. Conservation of freshwater and euryhaline elasmobranchs. J Mar Biol Ass. 85(5):1049–1073.
  • Mojica JI, Usma JS, Álvarez-León R, Lasso CA. 2012. Libro Rojo de Peces Dulceacuícolas de Colombia. Bogotá DC, (Colombia): Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Instituto de Ciencias Naturales de la Universidad Nacional de Colombia, WWF Colombia y Universidad de Manizales.
  • Moreau M-A, Coomes OT. 2007. Aquarium fish exploitation in Western Amazonia: conservation issues in Peru. Envir Conserv. 34(1):12–22.
  • Muñoz-Osorio, LA, Mejía-Falla PA. 2013. Primer Registro de La Raya Manzana, Paratrygon aiereba (Müller & Henle, 1841) (Batoidea: Potamotrygonidae) Para El Río Bita, Orinoquía, Colombia. Lat Am J Aquat Res. 41:189–193.
  • Olaya-Nieto C, Segura-Guevara WF, Tordecilla-Petro G. 2012. Paratrygon aiereba. In: Mojica C, Usma JI, Álvarez-León JS, Lasso R, editors. Libro rojo de peces dulceacuícolas de Colombia. Bogotá DC, (Colombia): Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Instituto de Ciencias Naturales de la Universidad Nacional de Colombia, WWF Colombia y Universidad de Manizales; p. 109.
  • Olivares AM, Hrbek T, Escobar MD, Caballero S. 2013. Population structure of the black arowana (Osteoglossum ferreirai) in Brazil and Colombia: implications for its management. Conserv Genet. 14(3):695–703.
  • Panijpan B, Laosinchai P, Senapin S, Kowasupat C, Ruenwongsa P, Kühne J, Phiwsaiya K. 2015. Mitochondrial COI and nuclear RAG1 DNA sequences and analyses of specimens of the three morphologically established species in the genus Trichopsis (Perciformes: Osphronemidae) reveal new/cryptic species. Meta Gene. 4:17–28.
  • Povh JA, Lopera Barrero NM, Ribeiro RP, Lupchinski E, Jr., Gomes PC, Lopes TS. 2008. Monitoreo Genético En Programas de Repoblamiento de Peces Mediante Marcadores Moleculares. Cienc Inv Agr. 35(1):5–15.
  • Quintanilla S, Gómez A, Mariño-Ramírez C, Sorzano C, Bessudo S, Soler G, Bernal JE, Caballero S. 2015. Conservation genetics of the scalloped hammerhead shark in the pacific coast of Colombia. JHERED. 106(S1):448–458.
  • Rambaut A. 2009. FigTree v1.4.4, Institute of Evolutionary Biology University of Edinburgh. Scotland, United Kingdom. http://tree.bio.ed.ac.uk/software/figtree/
  • Rambaut A, Drummond AJ, Xie D, Baele G, Suchard MA. 2018. Posterior summarization in bayesian phylogenetics using tracer 1.7. Syst Biol. 67(5):901–904.
  • Renza-Millán M, Lasso CA, Morales-Betancourt MA, Villa F, Caballero S. 2019. Mitochondrial DNA diversity and population structure of the ocellate freshwater stingray Potamotrygon motoro (Müller & Henle, 1841) (Myliobatiformes: Potamotrygonidae) in the Colombian Amazon and Orinoco Basins. Mitochondrial DNA A DNA Mapp Seq Anal. 30(3):466–473.
  • Rocha-Olivares A, Sandoval-Castillo JR. 2003. Diversidad Mitocondrial y Estructura Genética en Poblaciones Alopátricas del Huachinango Del Pacífico Lutjanus Peru. Ciencias Marinas. 29:197–205.
  • Rodríguez-Olarte D, Mojica JI, Taphorn DC. 2011. Northern South America: Magdalena and Maracaibo. In: Albert R, Reis JS, editors. Historical biogeography of neotropical freshwater fishes. Berkeley (CA): University of California Press; p. 243.
  • Rosa R, Charvet-Almeida P, Diban CC. 2010. Biology of the South American Potamotrygonidae Stingrays. In: Carrier M, Musick CC, Heithaus JA, editors. Sharks and their relatives II: Biodiversity, adaptive physiology and conservation. New York (NY): CRC Press; p. 241–281.
  • Rosa RS. 1990. Paratrygon Aiereba (Müller & Henle, 1841): The senior synonym of the freshwater stingray Disceus Thayeri Garman, 1913 (Chondrichthyes: Potamotrygonidae). Revista Brasileira de Zoologia. 7:425–437.
  • Ruiz-García M, Escobar-Armel P, de Thoisy B, Martínez-Agüero M, Pinedo-Castro M, Shostell JM. 2018. Biodiversity in the Amazon: origin hypotheses, intrinsic capacity of species colonization, and comparative phylogeography of river otters (Lontra longicaudis and Pteronura brasiliensis, Mustelidae, Carnivora) and Pink River Dolphin (Inia Sp., Iniidae, Cet. J Mammal Evol. 25(2):213–240.
  • Schaefer S. 2011. The Andes Riding the Tectonic Uplift. In: Albert R, Reis J, editors.Historical biogeography of Neotropical freshwater fishes. Berkeley (CA): University of California Press; p. 259–275.
  • Shen K-N, Chang C-W, Tsai S-Y, Wu S-C, Lin Z-H, Chan Y-F, Chen C-H, Hsiao C-D, Borsa P. 2016. Next generation sequencing yields complete mitogenomes of leopard whipray (Himantura leoparda) and blue-spotted stingray (Neotrygon kuhlii) (Chondrichthyes: Dasyatidae). Mitochondrial DNA A DNA Mapp Seq Anal. 27(4):2613–2614.
  • Shibuya A, Araújo MLG, Zuanon JAS. 2009. Analysis of stomach contents of freshwater stingrays (Elasmobranchii, Potamotrygonidae) from the Middle Negro River, Amazonas, Brazil. Pan-Am J Aquat Sci. 4(4):466–475.
  • Silva J. P C B d, de Carvalho MR. 2011a. A new species of neotropical freshwater stingray of the genus Potamotrygon, Garman 1877 from the Río Madrede Díos, Peru (Chondrichthyes: Potamotrygonidae). Pap Avulsos Zool (São Paulo). 51(8):139–154.
  • Silva J. P C B d, de Carvalho MR. 2011b. A taxonomic and morphological redescription of Potamotrygon falkneri, Castex & Maciel 1963 (Chondrichthyes: Myliobatiformes: Potamotrygonidae). Neotrop Ichthyol. 9:209–232.
  • Silva-Santos R, Ramirez JL, Galetti PM, Jr, Freitas PD. 2018. Molecular evidences of a hidden complex scenario in Leporinus cf. friderici. Front Genet. 9:47.
  • Stevens JD, Bonfil R, Dulvy NK, Walker PA. 2000. The effects of fishing on sharks, rays, and chimaeras (Chondrichthyans), and the implications for marine ecosystems. ICES J Mar Sci. 57(3):476–494.
  • Toffoli D, Hrbek T, Lúcia Góes de Araújo M, Pinto de Almeida M, Charvet-Almeida P, Farias IP. 2008. A test of the utility of DNA barcoding in the radiation of the freshwater stingray genus Potamotrygon (Potamotrygonidae, Myliobatiformes). Genet Mol Biol. 31(1 suppl):324–336.
  • Walsh PS, Metzger DA, Higuchi R. 1991. Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. BioTechniques. 10(4):506–513.
  • Ward RD, Zemlak TS, Innes BH, Last PR, Hebert PDN. 2005. DNA barcoding Australia’s fish species. Phil Trans R Soc B. 360(1462):1847–1857.
  • Weir BS, Clark Cockerham C. 1984. Estimating F-statistics for the analysis of population structure. Evolution. 38(6):1358–1370.
  • Willis SC, Winemiller KO, Montaña CG, Macrander J, Reiss P, Farias IP, Ortí G. 2015. Population genetics of the speckled peacock bass (Cichla temensis), South America’s most important inland sport fishery. Conserv Genet. 16(6):1345–1357.
  • Willis SC, Nunes MS, Montaña CG, Farias IP, Lovejoy NR. 2007. Systematics, biogeography, and evolution of the neotropical peacock basses Cichla (Perciformes: Cichlidae). Mol Phylogenet Evol. 44(1):291–307.
  • Winemiller KO, Willis SC. 2011. The Vaupes Arch and Casiquiare Canal: barriers and passages. In: Albert R, Reis JS, editors. Historical biogeography of Neotropical freshwater fishes. Berkeley (CA): University of California Press; p. 225.
  • Yu Y, Harris AJ, He X. 2010. S-DIVA (Statistical Dispersal-Vicariance Analysis): a tool for inferring biogeographic histories. Mol Phylogenet Evol. 56(2):848–850.
  • Yu Y, Harris AJ, Blair C, He X. 2015. RASP (Reconstruct Ancestral State in Phylogenies): a tool for historical biogeography. Mol Phylogenet Evol. 87:46–49.

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