1,385
Views
3
CrossRef citations to date
0
Altmetric
Research Article

Coupling molecular and risk analysis to investigate the origin, distribution and potential impact of non-native species: an application to ruffe Gymnocephalus cernua in Turkey

ORCID Icon, , , , , ORCID Icon & ORCID Icon show all
Pages 109-121 | Received 28 Oct 2021, Accepted 17 Dec 2021, Published online: 31 Jan 2022

References

  • Adams CE, Tippett R. 1991. Powan, Coregonus lavaretus (L.), ova predation by newly introduced ruffe, Gymnocephalus cernuus (L.), in Loch Lomond, Scotland. Aquaculture Research 22(2):239–246. DOI: 10.1111/j.1365-2109.1991.tb00513.x.
  • April J, Mayden RL, Hanner RH, Bernatchez L. 2011. Genetic calibration of species diversity among North America’s freshwater fishes. Proceedings of the National Academy of Sciences 108(26):10602–10607. DOI: 10.1073/pnas.1016437108.
  • Arab IY, Arab A, Kara HM. 2020. Range expansion of the ruffe (Gymnocephalus cernuus) to the southern Mediterranean: First record in Koudiat Medouar reservoir, Algeria. Journal of Applied Ichthyology 36(5):705–708. DOI: 10.1111/jai.14070.
  • Baltazar‐Soares M, Blanchet S, Cote J. 2020. Genomic footprints of a biological invasion: Introduction from Asia and dispersal in Europe of the topmouth gudgeon (Pseudorasbora parva). Molecular Ecology 29(1):71–85. DOI: 10.1111/mec.15313.
  • Bandelt HJ, Forster P, Röhl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Molecular Biology and Evolution 16(1):37–48. DOI: 10.1093/oxfordjournals.molbev.a026036.
  • Bergman E. 1991. Changes in abundance of two percids, Perca fluviatilis and Gymnocephalus cernuus, along a productivity gradient: Relations to feeding strategies and competitive abilities. Canadian Journal of Fisheries and Aquatic Sciences 48:536–545. DOI: 10.1139/f91-068.
  • Bergman E, Greenberg LA. 1994. Competition between a planktivore, a benthivore, and a species with ontogenetic diet shifts. Ecology 75(5):1233–1245. DOI: 10.2307/1937449.
  • Blackburn TM, Essl F, Evans T, Hulme PE, Jeschke JM, Kühn I, Kumschick S, Marková Z, Marková Z, Nentwig W, Pergl J, Pyšek P, Rabitsch W, Ricciardi A, Richardson DM, Sendek A, Vilà M, Wilson JRU, Winter M, Genovesi P, Bacher S. 2014. A unified classification of alien species based on the magnitude of their environmental impacts. PLoS Biology 12(5):article e1001850. DOI: 10.1371/journal.pbio.1001850.
  • Brabrand A. 2016. University of Oslo, Natural History Museum, BOLD Systems. Available: http://boldsystems.org/index.php/Public_RecordView?processid=NOFIS129-18.
  • Chiara G. 1986. First record of Acerina (Gymnocephalus) cernua L. (Osteichthyes Perciformes) in Italy. In: Quaderni Ente Tutela PAtrimonio Ittico, Udine, Italy. pp. 59–60.
  • Çiçek E, Emiroğlu Ö, Seçer B, Aksu S, Sungur S, Başkurt S, Bahçeci H. 2021. Confirmed record of Gymnocephalus cernua (Linnaeus, 1758) (Perciformes: Percidae) as a new exotic species for Turkey. Acta Biologica Turcica 34:46–53.
  • Collins M, Knutti R, Arblaster J, Dufresne JL, Fichefet T, Friedlingstein P, Shongwe M. 2013. Long-term climate change: Projections, commitments and irreversibility. In: Stocker TF, Qin D, Plattner G-K, Tignor M, Allen SK, Boschung J, Nauels A, Xia Y, Bex V, Midgley PM editors, Climate Change 2013: The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Cambridge, United Kingdom and New York, NY: Cambridge University Press. pp. 1029–1136.
  • Copp GH, Garthwaite R, Gozlan RE. 2005. Risk identification and assessment of non-native freshwater fishes: Concepts and perspectives on protocols for the UK. Cefas Science Technical Report. Lowestoft, UK: Cefas. Available: www.cefas.co.uk/‌publications/‌techrep/‌tech129.pdf.
  • Copp GH, Vilizzi L, Mumford J, Fenwick GV, Godard MJ, Gozlan RE. 2009. Calibration of FISK, an invasiveness screening tool for non-native freshwater fishes. Risk Analysis 29(3):457–467. DOI: 10.1111/j.1539-6924.2008.01159.x.
  • Copp GH, Vilizzi L, Tidbury H, Stebbing PD, Tarkan AS, Moissec L, Goulletquer P. 2016. Development of a generic decision-support tool for identifying potentially invasive aquatic taxa: AS-ISK. Management of Biological Invasions 7(4):343–350. DOI: 10.3391/mbi.2016.7.4.04.
  • Copp GH, et al. 2021. Environmental Modelling & Software, 135 article 104900. https://doi.org/10.1016/j.envsoft.2020.104900
  • Cristescu ME. 2015. Genetic reconstructions of invasion history. Molecular Ecology 24(9):2212–2225. DOI: 10.1111/mec.13117.
  • Cuthbert RN, Pattison Z, Taylor NG, Verbrugge L, Diagne C, Ahmed DA, Leroy B, Angulo E, Briski E, Capinha C, Catford CA, Dalu T, Essl F, Gozlan RE, Haubrock PJ, Kourantidou M, Kramer AM, Renault D, Wasserman RJ, Courchamp F. 2021. Global economic costs of aquatic invasive alien species. Science of the Total Environment 775:article 145238. DOI: 10.1016/j.scitotenv.2021.145238.
  • Dodd JA, Vilizzi L, Bean CW, Davison PI, Copp GH. 2019. At what spatial scale should risk screenings of translocated freshwater fishes be undertaken—river basin district or climo-geographic designation? Biological Conservation 230:122–130. DOI: 10.1016/j.biocon.2018.12.002.
  • Dulčić J, Glamuzina B, Tutman P. 2005. First record of ruffe Gymnocephalus cernuus (Percidae) in the Hutovo Blato wetland, Adriatic drainage system of Bosnia And Herzegovina. Cybium 29:205–206.
  • Estoup A, Guillemaud T. 2010. Reconstructing routes of invasion using genetic data: Why, how and so what? Molecular Ecology 19(19):4113–4130. DOI: 10.1111/j.1365-294X.2010.04773.x.
  • Glamuzina B, Tutman P, Nikolić V, Vidović Z, Pavličević J, Vilizzi L, Copp GH, Simonović P. 2017. Comparison of taxon-specific and taxon-generic risk screening tools for identifying potentially invasive non-native fishes in the River Neretva catchment (Bosnia & Herzegovina and Croatia). River Research and Applications 33(5):670–679. DOI: 10.1002/rra.3124.
  • Halacka K, Vetesnik L, Sanda R. 2010. National Museum of natural history, Prague. GenBank. Available: https://www.ncbi.nlm.nih.gov/nuccore/HQ961005.
  • Halacka K, Vetesnik L, Sanda R. 2011. National Museum of natural history. Prague: BOLD Systems. Available: http://boldsystems.org/index.php/Public_RecordView?processid=IFCZE976-12.
  • Hall TA. 1999. BioEdit: A user–friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41:95–98.
  • Hasegawa M, Kishino H, Yano T. 1985. Dating the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22(2):160–174. DOI: 10.1007/BF02101694.
  • Hawkins CL, Bacher S, Essl F, Hulme PE, Jeschke JM, Kühn I, Kumschick S, Nentwig W, Pergl J, Pyšek P, Rabitsch W, Richardson DM, Vilà M, Wilson JRU, Genovesi P, Blackburn TM. 2015. Framework and guidelines for implementing the proposed IUCN Environmental Impact Classification for Alien Taxa (EICAT). Diversity and Distributions 21(11):1360–1363. DOI: 10.1111/ddi.12379.
  • Hill J, Sowards J. 2015. Successful eradication of the non-native loricariid catfish Pterygoplichthys disjunctivus from the Rainbow River, Florida. Management of Biological Invasions 6(3):311–317. DOI: 10.3391/mbi.2015.6.3.11.
  • Hill JE, Hardin S, Lawson KM, Lawson Jr LL, Tuckett QM, Vilizzi L, Watson CA, Copp GH. 2020. Comparing apples to oranges and other misrepresentations of the Invasiveness Screening Kit family of risk screens: A rebuttal of Marcot et al. (2019). Management of Biological Invasions 11(2):325–341. DOI: 10.3391/mbi.2020.11.2.10.
  • Hölker F, Thiel R. 1998. Biology of Ruffe (Gymnocephalus cernuus (L.))-A review of selected aspects from European literature. Journal of Great Lakes Research 24(2):186–204. DOI: 10.1016/S0380-1330(98)70812-3.
  • Hubert N, Hanner R, Holm E, Mandrak NE, Taylor E, Burridge M, Watkinson D, Dumont P, Curry A, Bentzen P, Zhang J, April J, Bernatchez L. 2008. Identifying Canadian freshwater fishes through DNA barcodes. PLOS ONE 3(6):article e2490. DOI: 10.1371/journal.pone.0002490.
  • IPCC. 2005. Guidance notes for lead authors of the IPCC fourth assessment report on addressing uncertainties. Intergovernmental Panel on Climate Change, WMO & UNEP. Available: www.ipcc.ch/pdf/assessment-report/ar4/wg1/ar4-uncertaintyguidancenote.pdf.
  • IUCN. 2020. IUCN EICAT categories and criteria. The Environmental Impact Classification for Alien Taxa (EICAT). First ed. Gland, Switzerland and Cambridge, UK: IUCN.
  • Janssen J. 1997. Comparison of response distance to prey via the lateral line in the ruffe and yellow perch. Journal of Fish Biology 51(5):921–930. DOI: 10.1111/j.1095-8649.1997.tb01531.x.
  • Karabanov D, Borovikova E. 2016. DNA-barcoding of fishes of Plescheevo Lake (Yaroslavl reg., Russia). GenBank. Available: https://www.ncbi.nlm.nih.gov/nuccore/KT989768.
  • Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16(2):111–120. DOI: 10.1007/BF01731581.
  • Knebelsberger T, Dunz AR, Neumann D, Geiger MF. 2015. Molecular diversity of Germany’s freshwater fishes and lampreys assessed by DNA barcoding. Molecular Ecology Resources 15(3):562–572. DOI: 10.1111/1755-0998.12322.
  • Kottelat M, Freyhof J. 2007. Handbook of European freshwater fishes. Vol. 13. Switzerland: Publications Kottelat Cornol.
  • Kováč V. 1998. Biology of Eurasian ruffe from Slovakia and adjacent central European countries. Journal of Great Lakes Research 24(2):205–216. DOI: 10.1016/S0380-1330(98)70813-5.
  • Kozlova MF, Panasenko VA. 1977. Annual food consumption of bream (Abramis brama) and ruffe (Acerina cernua) populations in the Courland Lagoon (Kurshskiy Zaliv). Journal of Ichthyology 17:382–388.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: Molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution 35(6):1547–1549. DOI: 10.1093/molbev/msy096.
  • Kuru M. 2004. Recent systematic status of inland water fishes of Turkey. Journal of Education Faculty of Gazi 24:1–21.
  • Leigh JW, Bryant D. 2015. Data from: PopART: Full‐feature software for haplotype network construction. Methods in Ecology and Evolution 6(9):1110–1116. DOI: 10.1111/2041-210X.12410.
  • Librado P, Rozas J. 2009. DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25(11):1451–1452. DOI: 10.1093/bioinformatics/btp187.
  • Matthey G. 1966. Two species new to the fauna of the lake Geneva: Dreissena polymorpha Pallas (Mollusca, Dreissenidae), Acerina cernua (L) (Pisces, Percidae). Bulletin De La Société Vaudoise De Sciences Naturelles 69:229–232.
  • Mayo KR, Selgeby JH, McDonald ME. 1998. A bioenergetic modelling evaluation of top-down control of ruffe in the St. Luise River, western Lake Superior. Journal of Great Lakes Research 24(2):329–342. DOI: 10.1016/S0380-1330(98)70824-X.
  • Montgomery I, Lundy M, Neil R. 2012. ‘Invasional meltdown’: Evidence for unexpected consequences and cumulative impacts of multispecies invasions. Biological Invasions 14(6):1111–1125. DOI: 10.1007/s10530-011-0142-4.
  • Nentwig W, Kuhnel E, Bacher S. 2010. A generic impact scoring system applied to alien mammals in Europe. Conservation Biology 24(1):302–311. DOI: 10.1111/j.1523-1739.2009.01289.x.
  • Ogle DH. 1998. A synopsis of the biology and life history of ruffe. Journal of Great Lakes Research 24(2):170–185. DOI: 10.1016/S0380-1330(98)70811-1.
  • Öztürk MZ, Çetinkaya G, Aydın S. 2017. Köppen-Geiger iklim sınıflandırmasına göre Türkiye’nin iklim tipleri [Climate types of Turkey according to Köppen-Geiger climate classification]. Istanbul University Journal of Geography 35:17–27. [In Turkish ith English abstract.
  • Petriki O, Naziridis T, Apostolou A, Koutrakis E, Bobori DC. 2014. The spread of the introduced Gymnocephalus cernua Linnaeus, 1758 (Perciformes: Percidae) along the transboundary Strymonas (Struma) River basin: First report in Kerkini Dam Lake (Greece). Acta Zoologica Bulgarica 66:563–566.
  • Pheloung PC, Williams PA, Halloy SR. 1999. A weed risk assessment model for use as a biosecurity tool evaluating plant introductions. Journal of Environmental Management 57(4):239–251. DOI: 10.1006/jema.1999.0297.
  • Pihu ER, Maemets A. 1982. The management of fisheries in Lake Vortsjarv. Hydrobiologia 86(1–2):207–210. DOI: 10.1007/BF00005812.
  • Popova OA, Reshetnikov YS, Kiyashko VI, Dgebuadze YY, Mikheev VN. 1998. Ruffe from the former USSR: Variability within the largest part of its natural range. Journal of Great Lakes Research 24(2):263–284. DOI: 10.1016/S0380-1330(98)70818-4.
  • Posada D. 2008. jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution 25(7):1253–1256. DOI: 10.1093/molbev/msn083.
  • Pratt D. 1988. Distribution and population status of the ruffe (Gymnocephalus cernua) in the St. Louis estuary and Lake Superior. Great Lakes Fishery Commission, Research Completion Report. 12 pp.
  • Radočaj T, Špelić I, Vilizzi L, Povž M, Piria M. 2021. Identifying threats from introduced and translocated non-native freshwater fishes in Croatia and Slovenia under current and future climatic conditions. Global Ecology and Conservation 27:article e01520. DOI: 10.1016/j.gecco.2021.e01520.
  • Rösch R, Kangur A, Kangur K, Krämer A, Ráb P. 1996. Ruffe (Gymnocephalus cernuus). Annales Zoologici Fennici, Helsinki: Suomen Biologian Seura Vanamo 33:305–308.
  • Roy HE, et al. 2018. Developing a framework of minimum standards for the risk assessment of alien species. Journal of Applied Ecology 55(2):526–538. DOI: 10.1111/1365-2664.13025.
  • Savino JF, Kolar CS. 1996. Competition between nonindigenous ruffe and native yellow perch (Perca flavescens) in laboratory studies. Transactions of the American Fisheries Society 125(4):562–571. DOI: 10.1577/1548-8659(1996)125<0562:CBNRAN>2.3.CO;2.
  • Schleuter D, Eckmann R. 2006. Competition between perch (Perca fluviatilis) and ruffe (Gymnocephalus cernuus): The advantage of turning night into day. Freshwater Biology 51(2):287–297. DOI: 10.1111/j.1365-2427.2005.01495.x.
  • Selgeby J. 1998. Predation by ruffe (Gymnocephalus cernuus) on fish eggs in Lake Superior. Journal of Great Lakes Research 24(2):304–308. DOI: 10.1016/S0380-1330(98)70821-4.
  • Souchon Y, Tissot L. 2012. Synthesis of thermal tolerances of the common freshwater fish species in large Western Europe rivers. Knowledge and Management of Aquatic Ecosystems 405:article 03.
  • Tarkan AS, Marr SM, Ekmekçi FG. 2015. Non-native and translocated freshwater fish species in Turkey. FISHMED Fishes in Mediterranean Environments 2015(3):28.
  • Tarkan AS, Sarı HM, İlhan A, Kurtul I, Vilizzi L. 2017a. Risk screening of nonnative and translocated freshwater fish species in a Mediterranean-type shallow lake: Lake Marmara (West Anatolia). Zoology in the Middle East 63(1):48–57. DOI: 10.1080/09397140.2017.1269398.
  • Tarkan AS, Vilizzi L, Top N, Ekmekçi FG, Stebbing PD, Copp GH. 2017b. Identification of potentially invasive freshwater fishes, including translocated species, in Turkey using the Aquatic Species Invasiveness Screening Kit (AS-ISK). International Review of Hydrobiology 102(1–2):47–56. DOI: 10.1002/iroh.201601877.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22(22):4673–4680. DOI: 10.1093/nar/22.22.4673.
  • Vilizzi L, et al. 2019. A global review and meta-analysis of applications of the freshwater Fish Invasiveness Screening Kit. Reviews in Fish Biology and Fisheries 29(3):529–568. DOI: 10.1007/s11160-019-09562-2.
  • Vilizzi L, et al. 2021. A global-scale screening of non-native aquatic organisms to identify potentially invasive species under current and future climate conditions. Science of the Total Environment 788:article 147868. DOI: 10.1016/j.scitotenv.2021.147868.
  • Ward RD, Zemlak TS, Innes BH, Last PR, Hebert PDN. 2005. DNA barcoding Australia’s fish species. Philosophical Transactions of the Royal Society B 360(1462):1847–1857. DOI: 10.1098/rstb.2005.1716.
  • Winfield IJ, Adams CE, Fletcher JM. 1996. Recent introductions of the ruffe (Gymnocephalus cernuus) to three United Kingdom lakes containing Coregonus species. Annales Zoologici Fennici 33:459–466.
  • Yang T, Meng W, Zhang R, Gao T, Cai L, Hai S, Zhou Q. 2016. DNA barcoding of fishes in Irtysh River China. Russian Journal of Genetics 52(9):969–976. DOI: 10.1134/S1022795416090167.
  • Yoğurtçuoğlu B, Bucak T, Ekmekçi FG, Kaya C, Tarkan AS. 2021. Mapping the establishment and invasiveness potential of Rainbow trout (Oncorhynchus mykiss) in Turkey: With special emphasis on the conservation of native salmonids. Frontiers in Ecology and Evolution 8:article 599881. DOI: 10.3389/fevo.2020.599881.