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Original Article

Rearrangement Patterns of JC Virus Noncoding Control Region from Different Biological Samples

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Pages 603-611 | Published online: 10 Jul 2009

References

  • Agostini HT, Ryschkewisch CF, Stoner GL (1996). Geno-type profile of human polyomavirus JC excreted in urine of immunocompetent individuals. J Gun Microbiol 34: 159–164.
  • Ault GS, Stoner GL (1993). Human polyomavirus JC promoter/enhancer rearrangement patterns from pro-gressive multifocal leucoencephalopathy brain are unique derivatives of a single archetypal structure. J Virol 74: 1499–1507.
  • Bagnato F, Pietropaolo V, Di Taranto C, Lorenzano S, Toni D (2001). Chronic lymphocytic leukemia complicated by progressive multifocal leukoencephalopathy with-out apparent immunodepression. Eur J Neurol 8: 367–368.
  • Berger JR (2000). Progressive multifocal leukoencefalopa-thy. Curr Treat Options Neurol 2: 361–368.
  • Boyum A (1968). Isolation of mononuclear cells and gran-ulocytes from human blood. Scand J Clin Lab Invest 21: 77–89.
  • Ciappi S, Azzi A, De Santis R, Leoncini F, Sterrantino G, Mazzotta F, Mecocci L (1999). Archetypal and rear-ranged sequences of human polyomavirus JC transcrip-tion control region in peripheral blood leukocytes and in cerebrospinal fluid. I Gen Virol 80: 1017–1023.
  • Daniel DC, Wortm an MJ, Schiller RJ, Liu H, Gan L, Mellen JS, Chang C, Gallia GL, Rappaport J, Khalili K, Johnson EM (2001). Coordinate effects of human immunodefi-ciency virus type 1 protein Tat and cellular protein Pur a on DNA replication initiated at the JC virus origin. J Neurovirol 82: 1543–1553.
  • Degener AM, Pietropaolo V, Di Taranto C, Jin L, Ameglio F, Cordiali-Fei P, Trento E, Sinibaldi L, Orsi N (1999). Identification of a new control region in the genome of the DDP strain of BK virus isolated from PBMC. J Med Virol 58: 413–419.
  • Dorries K, Sbiera S, Eggers C, Arendt G, Dorries, R (2003). Association of human polyomavirus JC with periph-eral blood of immunoimpaired and healthy individuals. J NeuroVirol 9 (Suppl) 1: 81–87.
  • Elsner C, Dorries K (1998). Human polyomavirus JC control region variants in persistently infected CNS and kidney tissue. J Gen Virol 79: 789–799.
  • Flaegstad T, Sundsflord A, Arthur RR, Pedersen M, Traavik T, Subramani S (1991). Amplification and sequencing of the control regions of BK and JC virus from human urine by polimerase chain reaction. Virology 180: 553–560.
  • Gronostajski RM (2000). Roles of the NFI/CTF gene family in transcription and development. Gene 249: 31–45.
  • Henson JV (1994). Regulation of the glial-specific JC virus early promoter by the transcription factor Sp1. J Biol Chem 269: 1046–1050.
  • Jin L, Pietropaolo V, Booth JC, Ward HK, Brown DB (1995). Prevalence and distribution of BKV in healthy people and immunocompromised patients detected by PCR-restriction enzyme analysis. Clin Diag Virol 3: 285–295.
  • Krachmarov CP, Chepenik LG, Barr-Vagell S, Khalili K, Johnson EM (1996). Activation of the JC virus Tat-responsive transcriptional control element by associa-tion of Tat protein of human immunodeficiency virus 1 with cellular protein Pura. Proc Natl Acad Sci US A 93: 14112–14117.
  • Kumar KU, Tang SC, Pater MM, Pater A (1996). Glial and muscle embryonal carcinoma cell-specific independent regulation of expression of human JC virus early pro-moter by cyclic AMP response elements and adjacent nuclear factor 1 binding sites. J Med Virol 49: 199–204.
  • Kwok S, Higuchi R (1989). Avoiding false positive with PCR. Nature 339: 232–238.
  • Markowitz RB, Thompson HC, Mueller JF, Cohen JA, Dynan WS (1993). Incidence of BK virus and JC virus viruria in human immunodeficiency virus-infected and unin-fected subjects. /Infect Dis 167: 13–20.
  • Monaco MCG, Sabath BF, Durham LC, Major EO (2001). JC virus multiplication in human hematopoietic progeni-tor cells requires the NF-1 class D transcription factor. J Virol 75: 9687–9695.
  • Newman JT, Frisque RJ (1999). Identification of JC virus variants in multiple tissues of pediatric and adult PML patients. J Med Virol 58: 79–86.
  • Pietropaolo V, Di Taranto C, Degener AM, Jin L, Sinibaldi L, Baiocchini A, Melis M, Orsi N (1998). Transplacental transmission of human polyomavirus BK. J Med Virol 56: 372–376.
  • Ricciardello L, Chang DK, Laghi L, Goel A, Chang CL, Boland CR (2001). Mad-1 is the exclusive JC virus strain present in the human colon, and its transcriptional con-trol region has a delect 98-base-pair sequence in colon cancer tissues. J Virol 75: 1996–2001.
  • Richardson-Burns SM, Kleinnschmidt-DeMasters BK, De Biasi RL, Ty KL (2002). Progressive multifocal leukoen-cephalopathy and apoptosis of infected oligodendro- cytes in the central nervous system of patients with and without AIDS. Arch Neurol 59: 1930–1936.
  • Saiki RK, Scharf S, Faloona F, Mullis KB, Horn GT, Arnheim N (1985). Enzymatic amplification of /3-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science 230: 1350–1354.
  • Sala M, Vartanian JP, Kousignian P, Delfraissy JF, Taoufik Y, Wain-Hobson S, Gasnault J (2001). Progressive multifo-cal leucoencephalopathy in human immunodeficiency virus type 1-infected patients: absence of correlation be-tween JC virus neurovirulence and polymorphisms in the transcriptional control region and the major capsid protein loci. J Gen Virol 82: 899–907.
  • Shinohara T, Nagashima K, Major EO (1997). Propagation of the human polyomavirus JCV in human neuroblastoma cell lines. Virology 228: 269–277.
  • Summer C, Shinohara T, Durham L, Traub R, Major EO, Amemiya K (1996). Expression of multiple classes of the nuclear factor-1 family in the developing human brain: differential expression of two classes of NF1 genes. I NeuroVirol 2: 87–100.
  • Tretiakova A, Otte J, Croul SE, Kim JH, Johnson EM, Amini S, Khalili K (1999a). Association of JC virus large T anti-gen with myelin basic protein transcription factor (MEF-1/Pura ) in hypomyelinated brains of mice transgenic ally expressing T antigen. J Virol 73: 6076–6084.
  • Tretiakova A, Steplewski A, Johnson EM, Khalili K, Amini S (1999b). Regulation of myelin basic protein gene tran-scription by Sp1 and Pura: evidence for association of Sp1 and Pura in brain. J Cell Physiol 181: 160–168.
  • Valle LD, Croul S, Morgello S, Amini S, Rappaport J, Khalili K (2000). Detection of HIV-1 Tat and JCV capsid protein, VP1, in AIDS brain with progressive multifocal leucoen-cephalopathy. I NeuroVirol 6: 221–228.
  • Weber T, Major EO (1997). Progressive multifocal leucoen-cephalopathy: molecular biology, pathogenesis and clin-ical impact. Intervirology 40: 98–111.
  • Wortman MJ, Krachmarov CP, Kim JH, Gordon RG, Chepenik LG, Brady JN, Gallia GL, Khalili K, Johnson EM (2000). Interaction of HIV-1 Tat with Puralpha in nuclei of human glial cells: characterization of RNA-mediated protein-protein binding. J Cell Biochem 77: 65–74.

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