Application of Random Amplified Polymorphic DNA (RAPD) and Pulsed-Field Gel Electrophoresis (PFGE) Analysis to Listeriamonocytogenes: A Review of Methodology and Results

References

• Autio , T. , Hielm , S. , Miettinen , M. , Sjöberg , A. , Aarnisalo , K. , Björkroth , J. , Mattila-Sandholm , T. and Korkeala , H. 1999 . Sources of Listeria monocytogenes contamination in a cold-smoked rainbow trout processing plant detected by pulsed-field gel electrophoresis typing . App. Environ. Microbiol. , 65 : 150 – 155 .
   PubMed Web of Science ®Google Scholar
• Black , S.F. , Gray , D.I. , Fenlon , D.R. and Kroll , R.G. 1995 . Rapid RAPD analysis for distinguishing Listeria species and Listeria monocytogenes serotypes using a capillary air thermal cycler . Letters in Appl. Microbiol. , 20 : 188 – 190 .
   PubMed Web of Science ®Google Scholar
• Boerlin , P. , Bannerman , E. , Ischer , F. , Rocurt , J. and Bille , J. 1995 . Typing of Listeria monocytogenes: a comparison of random amplification of polymorphic DNA with 5 other methods . Res. Microbol. , 146 : 35 – 49 .
   PubMed Web of Science ®Google Scholar
• Brett , M.S.Y. , Short , P. and McLauchlin , J. 1998 . A small outbreak of listeriosis associated with smoked mussels . Intl. J. Food Microbiol. , 43 : 223 – 229 .
   PubMed Web of Science ®Google Scholar
• Brosch , R. , Buchrieser , C. and Rocourt , J. 1991 . Subtyping of Listeria monocytogenes serovar 4b by use of low-frequency-cleavage restriction endonucleases and pulsed-field gel electrophoresis . Res. in Microbiol. , 142 : 667 – 675 .
   PubMed Web of Science ®Google Scholar
• Brosch , R. , Brett , M. , Catimel , B. , Luchansky , J.B. , Ojeniyi , B. and Roacourt , J. 1996 . Genomic fingerprinting of 80 strains from the WHO multicenter international typing study of Listeria monocytogenes via pulsed-field gel electrophoresis (PFGE) . Int. J. Food Microbiol. , 32 : 343 – 355 .
   PubMed Web of Science ®Google Scholar
• Brosch , R. , Chen , J. and Luchansky , J.B. 1994 . Pulsed-field fingerprinting of listeriae: identification of genomic divisions for Listeria monocytogenes and their correlation with serovar . Appl. Environ. Microbiol. , 60 : 2584 – 2592 .
   PubMed Web of Science ®Google Scholar
• Buchrieser , C. , Brosch , R. and Rocourt , J. 1991 . Use of pulsed field gel electrophoresis to compare large DNA-restriction fragments of Listeria monocytogenes strains belonging to serogroups 1/2 and 3 . Int. J. Food Microbiol. , 14 : 297 – 304 .
   PubMed Web of Science ®Google Scholar
• Buchrieser , C. , Brosch , R. , Catimel , B. and Rocourt , J. 1992 . Pulsed-field gel electrophoresis applied for comparing Listeria monocytogenes strains involved in outbreaks . Can. J. Microbol. , 39 : 395 – 401 .
   Web of Science ®Google Scholar
• Czajka , J. , Bsat , N. , Piani , M. , Russ , W. , Sultana , K. , Wiedman , M. , Whitaker , R. and Batt , C. 1993 . Differentiation of Listeria monocytogenes and Listeria innocua by 16S rRNA genes and intraspecies discrimination of Listeria monocytogenes strains by random amplified polymorphic DNA polymorphisms . Appl. Environ. Microbiol. , 59 : 304 – 308 .
   PubMed Web of Science ®Google Scholar
• del Tufo , J. and Tingey , S. 1994 . “ RAPD assay ” . In Protocols for Nucleic Acid Analysis by Nonradioactive Probes Edited by: Isaac , P.G. pp. 237 – 241 . Totowa , NJ : Humana Press .
   Google Scholar
• Destro , M.T. , Leitao , M.F.F. and Farber , J.M. 1996 . Use of molecular typing methods to trace the dissemination of Listeria monoctogenes in a shrimp processing plant . Appl. Environ. Microbol. , 62 : 705 – 711 .
   PubMed Web of Science ®Google Scholar
• FAO . FAO fisheries report no. 604 . Report of the FAO Expert Consultation on the Trade Impact of Listeria in Fish Products . May 17–20 1999 , Amherst, MA , US. United Nations, Rome, Italy
   Google Scholar
• Farber , J.M. and Addison , C.J. 1994 . Rapid typing for distinguishing species and strains in the genus Listeria . J. Appl. Bacteriol. , 77 : 242 – 250 .
   PubMedGoogle Scholar
• Franciosa , G. , Tartara , S. , Wedell-Neergaard , C. and Aureli , P. 2001 . Characterization of Listeria monocytogenes strains involved in invasive and noninvasive listeriosis outbreaks by PCR-based fingerprinting techniques . Appl. Environ. Microbiol. , 67 : 1793 – 1799 .
   PubMed Web of Science ®Google Scholar
• Giovannacci , I. , Ragimbeau , C. , Queguiner , S. , Salvat , G. , Vendeuvre , J.-L. , Carlier , V. and Ernel , G. 1999 . Listeria monocytogenes in pork slaughtering and cutting plants: use of RAPD, PFGE and PCR-REA for tracing and molecular epidemiology . Int. J. Food Microbiol. , 53 : 127 – 140 .
   PubMed Web of Science ®Google Scholar
• Gurrieri , S. , Rizzarelli , B.E. , Beach , D. and Bustamante , C. 1990 . Imaging of kinked configurations of DNA molecules undergoing orthogonal field alternating gel electrophoresis by fluorescence microscopy . Biochem. , 29 : 3396 – 3401 .
   PubMed Web of Science ®Google Scholar
• Harvey , J. and Gilmour , A. 2001 . Characterization of recurrent and sporadic Listeria monocytogenes isolates from raw milk and nondairy foods by pulsed-field gel electrophoresis, monocin typing, plasmid profiling, and cadmium and antibiotic resistance determination . Appl. Environ. Microbiol. , 67 : 840 – 847 .
   PubMed Web of Science ®Google Scholar
• Howard , P.J. , Harsono , K.D. and Luchansky , J.B. 1992 . Differentiation of Listeria monocytogenes, Listeria innocua, Listeria ivanovii, and Listeria seeligeri by pulsed-field gel electrophoresis . Appl. Environ. Microbiol. , 58 : 709 – 712 .
   PubMed Web of Science ®Google Scholar
• Kerr , K.G. , Kite , P. , Heritage , J. and Hawkey , P.M. 1995 . Typing of epidemiologically associated environmental and clinical strains of Listeria monocytogenes by random amplification of polymorphic DNA . J. Food Protection , 58 : 609 – 613 .
   Web of Science ®Google Scholar
• Lawrence , L. , Harvey , J. and Gilmour , A. 1993 . Development of a random amplification of polymorphic DNA typing method for Listeria monocytogenes . Appl. Environ. Microbiol. , 59 : 3117 – 3119 .
   PubMed Web of Science ®Google Scholar
• Lawrence , L. and Gilmour , A. 1995 . Characterization of Listeria monocytogenes isolated forom poultry products and from poultry-processing environment by random amplification of polymorphic DNA and multilocus enzyme electrophoresis . Appl. Environ. Microbiol. , 61 : 2139 – 2144 .
   PubMed Web of Science ®Google Scholar
• Levett , P.N. , Bennett , P. , O’Donoghue , K. , Bowker , K. , Reeves , D. and MacGowan , A. 1993 . Relapsed infection due to Listeria monocytogenes confirmed by random amplified polymorphic DNA (RAPD) analysis . J. Infect. , 27 : 205 – 207 .
   PubMed Web of Science ®Google Scholar
• Louie , M. , Jayaratne , P. , Luchsinger , I. , Devenish , J. , Yao , J. , Schlech , W. and Simor , A. 1996 . Comparison of ribotyping arbitrary primed PCSR, and pulsed-field gel electrophoresis for molecular typing of Listeria monocytogenes . J. Clin. Microbiol. , 34 : 15 – 19 .
   PubMed Web of Science ®Google Scholar
• MacGowan , A.P. , O’Donaghue , K.O. , Nicholls , S. , Bowker , K. , McLauchlin , J. , Bennett , P. and Reeves , D.S. 1993 . Typing of Listeria sp. by random amplified polymorphic DNA (RAPD) analysis . J. Med. Microbiol. , 38 : 322 – 327 .
   PubMed Web of Science ®Google Scholar
• Mazurier , S.-I. and Wernars , K. 1992 . Typing of Listeria strains by random amplification of polymorphic DNA . Res. Microbiol. , 143 : 499 – 505 .
   PubMed Web of Science ®Google Scholar
• Mazurier , S.-I. , Audurier , A. , Marquet-Van der Mee , N. , Notermans , S. and Wernars , K. 1992 . A comparative study of randomly amplified polymorphic DNA analysis and conventional phage typing for epidemiological studies of Listeria monocytogenes isolates . Res. Microbiol. , 143 : 507 – 512 .
   PubMed Web of Science ®Google Scholar
• Meuner , J. and Grimont , P. 1993 . Factors affecting reproducibility of random amplified polymorphic DNA fingerprinting . Res. Microbiol. , 144 : 373 – 379 .
   PubMed Web of Science ®Google Scholar
• Miettinen , M.K. , Björkroth , K.J. and Kkorkeala , H.J. 1999 . Characterization of Listeria monocytogenes from an ice cream plant by serotyping and pulsed-field gel electrophoresis . Int. J. Food Microbiol. , 46 : 187 – 192 .
   PubMed Web of Science ®Google Scholar
• Nakama , A. , Matsuda , M. , Itoh , T. and Kaneuchi , C. 1998 . Molecular typing of Listeria monocytogenes isolated in Japan by pulsed-field gel electrophoresis . J. Vet. Med. Sci. , 60 : 749 – 752 .
   PubMed Web of Science ®Google Scholar
• Niederhauser , C. , Höfelein , C. , Alimann , M. , Burkhalater , P. , Lüthy , J. and Candrian , U. 1994 . Random amplification of polymorphic bacterial DNA: evaluation of 11 oligonucleotides and application to food contaminated with Listeria monocytogenes . J. Appl. Bacteriol. , 77 : 574 – 582 .
   PubMedGoogle Scholar
• Norwood , D.E. and Gilmour , A. 1999 . Adherence of Listeria monocytogenes strains to stainless steel coupons . J. Appl. Microbiol. , 86 : 576 – 582 .
   PubMed Web of Science ®Google Scholar
• Objeniyi , B. , Wegener , H.C. , Jensen , N.E. and Bisgaard , M. 1996 . Listeria monocytogenes in poultry and poultry products: epidemiological investigations in seven Danish abattoirs . J. Appl. Bacteriol. , 80 : 395 – 401 .
   PubMedGoogle Scholar
• O’Donaghue , K. , Nicholls , S. , McLauchlin , J. , Bennett , P.M. and Reeves , D.S. 1993 . Typing of Listeria spp. by random amplified polymorphic DNA (RAPD) analysis . J. Med. Microbiol. , 38 : 322 – 327 .
   PubMed Web of Science ®Google Scholar
• O’Donoghue , K. , Bowker , K. , McLauchlin , J. , Reeves , D.S. , Bennett , P.M. and MacGowan , A.P. 1995 . Typing of Listeria monocytogenes by random amplified polymorphic DNA (RAPD) analysis . Int. J. Food Microbiol. , 27 : 245 – 252 .
   PubMed Web of Science ®Google Scholar
• Unnerstad , H. , Bannerman , E. , Bille , J. , Danielsson-Tham , M. , Waak , E. and Tham , W. 1996 . Prolonged contamination of a dairy with Listeria monocytogenes . Netherlands Milk & Dairy J. , 50 : 493 – 499 .
   Google Scholar
• Vela , A.J. , Fernandez-Garayzabal , J.F. , Vazquez , J.A. , Latre , M.V. , Blanco , M.M. , Moreno , M.A. , De La Fuente , L. , Marco , J. , Franco , C. , Cepeda , A. , Rodriguez-Moure , A.A. , Suarez , G. and Doninguez , L. 2001 . Molecular typing by pulsed-field gel electrophoresis of Spanish animal and human Listeria monocytogenes isolates . Appl. Environ. Microbiol. , 67 : 5840 – 5843 .
   PubMed Web of Science ®Google Scholar
• Vogel , B.F. , Huss , H.H. , Ojeniyi , B. , Ahrens , P. and Gram , L. 2001a . Elucidation of Listeria monocytogenes contamination routes in cold-smoked salmon processing plants detected by DNA-based typing methods . Appl. Environ. Microbiol. , 67 : 2586 – 2595 .
   PubMed Web of Science ®Google Scholar
• Vogel , B.F. , Jørgensen , L.V. , Ojeniyi , B. , Huss , H.H. and Gram , L. 2001b . Diversity of Listeria monocytogenes isolates from cold-smoked salmon produced in different smokehouses as assessed by random amplified polymorphic DNS analysis . Int. J. Food Microbiol. , 65 : 83 – 92 .
   PubMed Web of Science ®Google Scholar
• Wagner , M. and Allerberger , F. 2003 . Characterization of Listeria monocytogenes recovered from 41 cases of sporadic listeriosis in Austria by serotyping and pulsed-field gel electrophoresis . FEMS Immunol. and Med. Microbiol. , 35 : 227 – 234 .
   PubMedGoogle Scholar
• Welsh , J. and McClelland , M. 1990 . Fingerprinting genomes using PCR with arbitrary primers . Nucleic Acids Res. , 18 : 7213 – 7218 .
   PubMed Web of Science ®Google Scholar
• Wernars , K. , Boerlin , P. , Audurier , A. , Russell , E.G. , Curtis , G.D.W. , Herman , L. and van der Mee-Marquet , N. 1996 . The WHO multicenter study on Listeria monocytogenes subtyping: random amplification of polymorphic DNA (RAPD) . Int. J. Food Microbiol. , 32 : 325 – 341 .
   PubMed Web of Science ®Google Scholar
• Williams , G.K. , Kubelik , A.R. , Livak , K.J. , Rafalsi , J.A. and Tingey , S.V. 1990 . DNA polymorphisms amplified by arbitrary primers are useful as genetic markers . Nucleic Acids Res. , 18 : 6531 – 6535 .
   PubMed Web of Science ®Google Scholar