References
- Conner , B. J. , Reyes , A. A. , Morin , C. , Itakura , K. , Teplitz , R. L. and Wallace , R. B. 1983 . Detection of sickle cell βS‐globin allele by hybridisation with synthetic oligonucleotides . Proc. Natl. Acad. Sci. U. S. A. , 80 : 278 – 282 .
- Ikuta , S. , Takagi , K. , Wallace , R. B. and Itakura , K. 1987 . Dissociation kinetics of 19 base paired oligonucleotide‐DNA duplexes containing different mismatched base pairs . Nucleic Acids Res. , 15 : 797 – 811 .
- Werntges , H. , Steger , G. , Reisner , D. and Fritz , H. J. 1986 . Mismatches in DNA double strands: thermodynamic parameters and their correlation to repair differences . Nucleic Acids Res. , 14 : 3773 – 3790 .
- Ke , S. H. and Wartell , R. M. 1993 . Influence of nearest neighbor sequence on the stability of base pair mismatches in long DNA: determination by temperature‐gradient electrophoresis . Nucleic Acids Res. , 21 : 5137 – 5143 .
- Ohtsuka , E. , Matsuki , S. , Ikehara , M. , Takahashi , Y. and Matsubara , K. 1985 . An alternative approach to deoxynucleotides as hybridisation probes by insertion of deoxyinosine at ambiguous codon positions . J. Biol. Chem. , 260 : 2605 – 2608 .
- Takahashi , Y. , Kato , K. , Hayashizaki , Y. , Wakabayashi , T. , Ohtsuka , E. , Matsuki , S. , Ikehara , M. and Matsubara , K. 1985 . Molecular‐cloning of the human cholecystokinin gene by use of a synthetic probe containing deoxyinosine . Proc. Natl. Acad. Sci. U. S. A. , 82 : 1931 – 1935 .
- Martin , F. H. , Castro , M. M. , Aboul‐ela , F. and Tinoco , I. 1985 . Base‐pairing involving deoxyinosine—implications for probe design . Nucleic Acids Res. , 13 : 8927 – 8938 .
- Loakes , D. 2001 . The applications of universal DNA base analogues . Nucleic Acids Res. , 29 : 2437 – 2447 . and references therein
- Bergstrom , D. E. , Zhang , P. , Toma , P. H. , Andrews , P. C. and Nichols , R. 1995 . Synthesis, structure and deoxyribonucleic acid sequencing with a universal base: 1‐(2′‐deoxy‐β‐D‐ribofuranosyl)‐3‐nitropyrrole . J. Am. Chem. Soc. , 117 : 1201 – 1209 .
- Loakes , D. and Brown , D. M. 1994 . 5‐Nitroindole as an universal base analogue . Nucleic Acids Res. , 22 : 4039 – 4043 .
- Guo , Z. , Liu , Q. and Smith , L. M. 1997 . Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridisation . Nat. Biotechnol. , 15 : 331 – 335 .
- Luo , J. Y. , Bergstrom , D. E. and Barany , F. 1996 . Improving the fidelity of Thermusthermophilus DNA‐ligase . Nucleic Acids Res. , 24 : 3071 – 3078 .
- Schweitzer , B. and Kool , E. T. 1995 . Hydrophobic, non‐hydrogen‐bonding bases and base‐pairs in DNA . J. Am. Chem. Soc. , 117 : 1863 – 1872 .
- Honoré , B. , Madsen , P. and Leffers , H. 1993 . The tetramethylammonium chloride method for screening of cDNA libraries using highly degenerate oligonucleotides by backtranslation of amino‐acid sequences . J. Biochem. Biophys. Methods , 27 : 39 – 48 .
- Hill , F. , Loakes , D. and Brown , D. M. 1998 . Polymerase recognition of synthetic oligodeoxyribonucleotides incorporating degenerate pyrimidine and purine bases . Proc. Natl. Acad. Sci. U. S. A. , 95 : 4258 – 4263 .
- Loakes , D. , Brown , D. M. , Linde , S. and Hill , F. 1995 . 3‐Nitropyrrole and 5‐nitroindole as universal bases in primers for DNA sequencing and PCR . Nucleic Acids Res. , 23 : 2361 – 2366 .
- Jacobs , K. A. , Rudersdorf , R. , Neill , S. D. , Dougherty , J. P. , Brown , E. L. and Fritsch , E. F. 1988 . The thermal stability of oligonucleotide duplexes is sequence independent in tetraalkylammonium salt solutions: application to identifying recombinant DNA clones . Nucleic Acids Res. , 16 : 4637 – 4650 .
- Burgner , D. , Usen , S. , Rockett , K. , Jallow , M. , Ackerman , H. , Cervino , A. , Pinder , M. and Kwiatkowski , D. P. 2003 . Nucleotide and haploytic diversity of the NOS2A promoter region and its relationship to cerebral malaria . Hum. Genet. , 112 : 379 – 386 .
- Buti , M. , Jardi , R. , Rodriguez‐Frias , F. , Arranz , J. A. , Casacuberta , J. M. , Sansegundo , B. , Puigdomenech , P. , Esteban , R. and Guardia , J. 1991 . Digoxygenin‐labelled DNA‐probe: a rapid non‐radioactive method for hepatitis B virus DNA detection in serum . Eur. J. Clin. Chem. Clin. Biochem. , 29 : 731 – 735 .