Exploring Potential Spatial-Temporal Links Between Fluvial Geomorphology and Nutrient-Periphyton Dynamics in Streams Using Simulation Models

References

• Alexander , R. B. , Smith , R. A. and Schwartz , G. E. 2000 . Effect of stream channel size on the delivery of nitrogen to the Gulf of Mexico . Nature , 403 : 758 – 61 .
   PubMed Web of Science ®Google Scholar
• Anderson , E. L. , Welch , E. B. , Jacoby , J. M. , Schimek , G. M. and Horner , R. R. 1999 . Periphyton removal related to phosphorus and grazer biomass level . Freshwater Biology , 41 : 633 – 51 .
   Web of Science ®Google Scholar
• Biggs , B. J. F. and Close , M. E. 1989 . Periphyton biomass dynamics in gravel bed rivers: The relative effect of flows and nutrients . Freshwater Biology , 22 : 209 – 31 .
   Web of Science ®Google Scholar
• Biggs , B. J. F. and Thomson , H. A. 1995 . Disturbance in stream periphyton by perturbations in shear stress: Time to structural failure and differences in community composition . Journal of Phycology , 31 : 233 – 41 .
   Web of Science ®Google Scholar
• Butturini , A. and Sabater , F. 1998 . Ammonium and phosphate retention in a Mediterranean stream: Hydrological versus temperature control . Canadian Journal of Fisheries and Aquatic Sciences , 55 : 1938 – 45 .
   Web of Science ®Google Scholar
• Costa , J. E. 1974 . Response and recovery of a Piedmont watershed from tropical storm Agnes . Water Resources Research , 10 : 106 – 12 .
   Web of Science ®Google Scholar
• D'Angelo , D. J. , Webster , J. R. , Gregory , S. V. and Meyer , J. L. 1993 . Transient storage in Appalachian and Cascade Mountain streams as related to hydraulic characteristics . Journal of the North American Benthological Society , 12 : 223 – 35 .
   Google Scholar
• DeAngelis , D. L. , Loreau , M. , Neergaard , D. , Molholland , P. J. and Marzolf , E. R. 1995 . Modelling nutrient-periphyton dynamics in streams: The importance of transient storage zones . Ecological Modelling , 80 : 149 – 60 .
   Web of Science ®Google Scholar
• Dent , L. and Henry , J. C. 1998 . Modelling nutrient-periphyton dynamics in streams with surface-subsurface exchange . Ecological Modelling , 122 : 97 – 116 .
   Web of Science ®Google Scholar
• Dodds , W. K. 2003 . The role of periphyton in phosphorus retention in shallow freshwater aquatic ecosystems . Journal of Phycology , 39 : 840 – 49 .
   Web of Science ®Google Scholar
• Doyle , M. W. and Harbor , J. M. 2003 . Modeling the effect of form and profile adjustments on channel equilibrium timescales . Earth Surface Processes and Landforms , 28 : 1271 – 87 .
   Web of Science ®Google Scholar
• Doyle , M. W. and Shields , F. D. 2000 . Incorporation of bed texture into a channel evolution model . Geomorphology , 34 : 291 – 309 .
   Web of Science ®Google Scholar
• Doyle , M. W. , Stanley , E. H. and Harbor , J. M. 2002 . Assessing probable channel response to dam removal using geomorphic analogies . Journal of the American Water Resources Association , 38 : 1567 – 79 .
   Web of Science ®Google Scholar
• Doyle M. W., Stanley E. H., Harbor J. M. 2003. Channel adjustments following two dam removals in Wisconsin. Water Resources Research 39:10.1029/2002WR001714
   Google Scholar
• Duffer , W. R. and Dorris , T. C. 1966 . Primary productivity in a southern Great Plains stream . Limnology and Oceanography , 11 : 143 – 51 .
   Web of Science ®Google Scholar
• Fernald , A. G. , Wigington , P. J. and Landers , D. H. 2001 . Transient storage and hyporheic flow along the Willamette River, Oregon: Field measurements and model estimates . Water Resources Research , 37 : 1681 – 94 .
   Web of Science ®Google Scholar
• Frissell , C. A. , Liss , W. J. , Warren , C. E. and Hurley , M. D. 1986 . A hierarchical framework for stream habitat classification: Viewing streams in a watershed context . Environmental Management , 10 : 199 – 214 .
   Web of Science ®Google Scholar
• Galay , V. J. 1983 . Causes of river bed degradation . Water Resources Research , 19 : 1057 – 90 .
   Web of Science ®Google Scholar
• Grimm , N. B. 1987 . Nitrogen dynamics during succession in a desert stream . Ecology , 68 : 1157 – 70 .
   Web of Science ®Google Scholar
• Hall , R. O. and Tank , J. L. 2003 . Ecosystem metabolism controls nitrogen uptake in stream in Grand Teton National Park, Wyoming . Limnology and Oceanography , 48 : 1120 – 28 .
   Web of Science ®Google Scholar
• Hancock , P. J. 2002 . Human impacts on the stream-groundwater exchange zone . Environmental Management , 29 : 763 – 81 .
   PubMed Web of Science ®Google Scholar
• Hart , D. R. , Mulholland , P. J. , Marzolf , E. R. , DeAngelis , D. L. and Hendricks , S. P. 1999 . Relationships between hydraulic parameters in a small stream under varying flow and seasonal conditions . Hydrological Processes , 13 : 1497 – 510 .
   Web of Science ®Google Scholar
• Harvey , J. W. and Wagner , B. J. 2000 . “ Quantifying hydrologic interactions between streams and their subsurface hyporheic zones ” . In Streams and groundwaters , San Diego, CA : Academic Press .
   Google Scholar
• Harvey , J. W. , Wagner , B. J. and Bencala , K. E. 1996 . Evaluating the reliability of the stream tracer approach to characterize stream-subsurface water exchange . Water Resources Research , 31 : 323 – 28 .
   Google Scholar
• Hawkins , C. P. , Kershner , J. L. , Bisson , P. A. , Bryant , M. D. , Decker , L. M. , Gregory , S. V. , McCullough , D. A. , Overton , C. K. , Reeves , G. H. , Steedman , R. J. and Young , M. K. 1993 . A hierarchical approach to classifying stream habitat features . Fisheries , 18 : 3 – 12 .
   Web of Science ®Google Scholar
• Hondzo , M. and Wang , H. 2002 . Effects of turbulence on growth and metabolism of periphyton in a laboratory flume . Water Resources Research , 38 : 1277
   Web of Science ®Google Scholar
• Horner , R. R. and Welch , E. B. 1981 . Stream periphyton development in relation to current velocity and nutrients . Canadian Journal of Fisheries and Aquatic Sciences , 38 : 449 – 57 .
   Web of Science ®Google Scholar
• Johnston , C. A. , Bridgham , S. D. and Schubauer-Berigan , J. P. 2001 . Nutrient dynamics in relation to geomorphology of riverine wetlands . Soil Science Society of American Journal , 65 : 557 – 77 .
   Web of Science ®Google Scholar
• Kasahara , T. and Wondzell , S. M. 2003 . Geomorphic controls on hyporheic exchange flow in mountain streams . Water Resources Research , 39
   Web of Science ®Google Scholar
• Kemp , M. J. and Dodds , W. K. 2002 . The influence of ammonium, nitrate, and dissolved oxygen concentrations on uptake, nitrification, and denitrification rates associated with prairie stream substrata . Limnology and Oceanography , 47 : 1380 – 93 .
   Web of Science ®Google Scholar
• Kim , B. K. , Packman , A. P. and Triska , F. J. 1990 . Modeling transient storage and nitrate uptake kinestics in a flume containing a natural periphyton community . Water Resources Research , 26 : 505 – 15 .
   Web of Science ®Google Scholar
• Laenen , A. and Bencala , K. E. 2001 . Transient storage assessments of dye-tracer injections in rivers of the Willamette Basin, Oregon . Journal of the American Water Resources Association , 37 : 367 – 78 .
   Web of Science ®Google Scholar
• Lamberti , G. A. , Gregory , S. V. , Ashkenas , L. R. , Wildman , R. C. and Moore , K. M. S. 1991 . Stream ecosystem recovery following a catastrophic debris flow . Canadian Journal of Fisheries and Aquatic Sciences , 48 : 196 – 208 .
   Web of Science ®Google Scholar
• Minshall , G. W. 1978 . Autotrophy in stream ecosystems . BioScience , 28 : 767 – 71 .
   Web of Science ®Google Scholar
• Mulholland , P. J. and DeAngelis , D. L. 2000 . “ Surface-subsurface exchange and nutrient spiraling ” . In Streams and groundwater , San Diego, CA : Academic Press .
   Google Scholar
• Munn , N. L. and Meyer , J. L. 1990 . Habitat-specific solute retention in two small streams: An intersite comparison . Ecology , 71 : 2069 – 82 .
   Web of Science ®Google Scholar
• Naiman , R. J. 1976 . Primary production, standing sock, and export of organic matter in a Mohave thermal stream . Limnology and Oceanography , 21 : 60 – 73 .
   Web of Science ®Google Scholar
• Pitlick , J. 1993 . Response and recovery of a subalpine stream following a catastrophic disturbance . Geological Society of America Bulletin , 105 : 657 – 70 .
   Web of Science ®Google Scholar
• Pizzuto , J. 2002 . Effects of dam removal on river form and process . BioScience , 52 : 683 – 91 .
   Web of Science ®Google Scholar
• Poff , N. L. , Allan , J. D. , Bain , M. B. , Karr , J. R. , Prestegaard , K. L. , Richter , B. D. , Sparks , R. E. and Stromberg , J. C. 1997 . The natural flow regime . BioScience , 47 : 769 – 84 .
   Web of Science ®Google Scholar
• Power , M. E. , Parker , G. , Dietrich , W. E. and Sun , A. 1995 . How does floodplain width affect floodplain river ecology? A preliminary exploration using simulations . Geomorphology , 13 : 301 – 17 .
   Web of Science ®Google Scholar
• Ritter , D. F. , Kochel , R. C. and Miller , J. R. 1999 . The disruption of Grassy Creek: Implications concerning events and thresholds . Geomorphology , 29 : 323 – 38 .
   Web of Science ®Google Scholar
• Runkel R. L. 1998. One-dimensional transport with inflow and storage (OTIS): A solute transport model for streams and rivers. Water-Resources Investigations. U.S. Geological Survey, Report 98-4018
   Google Scholar
• Runkel , R. L. 2002 . A new metric for determining the importance of transient storage . Journal of the North American Benthological Society , 21 : 529 – 43 .
   Google Scholar
• Rutherford , J. C. , Scarsbrook , M. R. and Broekhuizen , N. 2000 . Grazer control of stream algae: Modeling temperature and flood effects . Journal of Environmental Engineering , 126 : 331 – 39 .
   Web of Science ®Google Scholar
• Saravia , L. A. , Momo , F. and Boffi Lissin , L. D. 1998 . Modelling periphyton dynamics in running water . Ecological Modelling , 114 : 35 – 47 .
   Web of Science ®Google Scholar
• Simon , A. 1989 . A model of channel response in disturbed alluvial channels . Earth Surface Processes and Landforms , 14 : 11 – 26 .
   Web of Science ®Google Scholar
• Simon , A. and Collison , A. J. 2002 . Quantifying the mechanical and hydrologic effects of riparian vegetation on streambank stability . Earth Surface Processes and Landforms , 27 : 527 – 46 .
   Web of Science ®Google Scholar
• Sprent , J. I. 1987 . The ecology of the nitrogen cycle , Cambridge, U.K. : Cambridge University Press .
   Google Scholar
• Stanley , E. H. and Doyle , M. W. 2003 . Trading off: Ecological effects of dam removal . Frontiers in Ecology and the Environment , 1 : 15 – 22 .
   Web of Science ®Google Scholar
• Stanley , E. H. and Jones , J. B. 2000 . “ Surface-subsurface interactions: Past, present, and future ” . In Streams and groundwater , San Diego, CA : Academic Press .
   Google Scholar
• Stanley , E. H. , Luebke , M. A. , Doyle , M. W. and Marshall , D. W. 2002 . Short-term changes in channel form and macroinvertebrate communities following low-head dam removal . Journal of the North American Benthological Society , 21 : 172 – 87 .
   Web of Science ®Google Scholar
• Triska , F. J. , Kennedy , V. C. , Avanzino , R. J. , Zellweger , G. W. and Bencala , K. E. 1989 . Retention and transport of nutrients in a third-order stream: Hyporheic processes . Ecology , 70 : 1893 – 905 .
   Web of Science ®Google Scholar
• Uehlinger , U. , Bührer , H. and Reichert , P. 1996 . Periphyton dynamics in a floodprone prealpine river: Evaluation of significant processes by modeling . Freshwater Biology , 36 : 249 – 63 .
   Web of Science ®Google Scholar
• Valett , H. M. , Morrice , J. A. , Dahm , C. N. and Campana , M. E. 1996 . Parent lithology, surface-groundwater exchange, and nitrate retention in headwater streams . Limnology and Oceanography , 41 : 333 – 45 .
   Web of Science ®Google Scholar
• Vannote , R. L. , Minshall , G. W. , Cummins , K. W. , Sedell , J. R. and Cushing , C. E. 1980 . The river continuum concept . Canadian Journal of Fisheries and Aquatic Sciences , 37 : 130 – 37 .
   Web of Science ®Google Scholar
• Wetzel , R. G. 1975 . “ Primary production ” . In River ecology , Oxford, U.K. : Blackwell .
   Google Scholar
• Wetzel , R. G. and Ward , A. K. 1992 . “ Primary production ” . In Rivers handbook , Oxford, U.K. : Blackwell .
   Google Scholar
• Wondzell , S. M. and Swanson , F. J. 1999 . Floods, channel change, and the hyporheic zone . Water Resources Research , 35 : 555 – 67 .
   Web of Science ®Google Scholar