A Transcriptional Regulatory Role of the THAP11–HCF-1 Complex in Colon Cancer Cell Function

REFERENCES

• Ajuh PM, et al. 2000. Association of a protein phosphatase 1 activity with the human factor C1 (HCF) complex. Nucleic Acids Res. 28:678–686.
   PubMedGoogle Scholar
• Balakrishnan MP, et al. 2011. THAP5 is a DNA-binding transcriptional repressor that is regulated in melanoma cells during DNA damage-induced cell death. Biochem. Biophys. Res. Commun. 404:195–200.
   PubMedGoogle Scholar
• Balakrishnan MP, et al. 2009. THAP5 is a human cardiac-specific inhibitor of cell cycle that is cleaved by the proapoptotic Omi/HtrA2 protease during cell death. Am. J. Physiol. Heart Circ. Physiol. 297:H643–H653.
   PubMed Web of Science ®Google Scholar
• Bessière D, et al. 2008. Structure-function analysis of the THAP zinc finger of THAP1, a large C2CH DNA-binding module linked to Rb/E2F pathways. J. Biol. Chem. 283:4352–4363.
   PubMed Web of Science ®Google Scholar
• Campagne S, Saurel O, Gervais V, Milon A. 2010. Structural determinants of specific DNA-recognition by the THAP zinc finger. Nucleic Acids Res. 38:3466–3476.
   PubMedGoogle Scholar
• Cayrol C, et al. 2007. The THAP-zinc finger protein THAP1 regulates endothelial cell proliferation through modulation of pRB/E2F cell-cycle target genes. Blood 109:584–594.
   PubMed Web of Science ®Google Scholar
• Clouaire T, et al. 2005. The THAP domain of THAP1 is a large C2CH module with zinc-dependent sequence-specific DNA-binding activity. Proc. Natl. Acad. Sci. U. S. A. 102:6907–6912.
   PubMed Web of Science ®Google Scholar
• Core LJ, Waterfall JJ, Lis JT. 2008. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 322:1845–1848.
   PubMed Web of Science ®Google Scholar
• Dejosez M, et al. 2008. Ronin is essential for embryogenesis and the pluripotency of mouse embryonic stem cells. Cell 133:1162–1174.
   PubMedGoogle Scholar
• Dejosez M, et al. 2010. Ronin/Hcf-1 binds to a hyperconserved enhancer element and regulates genes involved in the growth of embryonic stem cells. Genes Dev. 24:1479–1484.
   PubMed Web of Science ®Google Scholar
• Freiman RN, Herr W. 1997. Viral mimicry: common mode of association with HCF by VP16 and the cellular protein LZIP. Genes Dev. 11:3122–3127.
   PubMedGoogle Scholar
• Fuchs T, et al. 2009. Mutations in the THAP1 gene are responsible for DYT6 primary torsion dystonia. Nat. Genet. 41:286–288.
   PubMed Web of Science ®Google Scholar
• Gunther M, Laithier M, Brison O. 2000. A set of proteins interacting with transcription factor Sp1 identified in a two-hybrid screening. Mol. Cell. Biochem. 210:131–142.
   PubMedGoogle Scholar
• Guttman M, et al. 2009. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature 458:223–227.
   PubMed Web of Science ®Google Scholar
• Guzmán-Aránguez A, et al. 2005. Differentiation of human colon adenocarcinoma cells alters the expression and intracellular localization of annexins A1, A2, and A5. J. Cell. Biochem. 94:178–193.
   PubMed Web of Science ®Google Scholar
• Hewitt RE, et al. 2000. Validation of a model of colon cancer progression. J. Pathol. 192:446–454.
   PubMed Web of Science ®Google Scholar
• Hsiang CH, Tunoda T, Whang YE, Tyson DR, Ornstein DK. 2006. The impact of altered annexin I protein levels on apoptosis and signal transduction pathways in prostate cancer cells. Prostate 66:1413–1424.
   PubMedGoogle Scholar
• Julien E, Herr W. 2003. Proteolytic processing is necessary to separate and ensure proper cell growth and cytokinesis functions of HCF-1. EMBO J. 22:2360–2369.
   PubMed Web of Science ®Google Scholar
• Kent WJ, et al. 2002. The human genome browser at UCSC. Genome Res. 12:996–1006.
   PubMed Web of Science ®Google Scholar
• Lecona E, et al. 2008. Upregulation of annexin A1 expression by butyrate in human colon adenocarcinoma cells: role of p53, NF-Y, and p38 mitogen-activated protein kinase. Mol. Cell. Biol. 28:4665–4674.
   PubMedGoogle Scholar
• Lee TI, Johnstone SE, Young RA. 2006. Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat. Protoc. 1:729–748.
   PubMed Web of Science ®Google Scholar
• Lu R, Misra V. 2000. Zhangfei: a second cellular protein interacts with herpes simplex virus accessory factor HCF in a manner similar to Luman and VP16. Nucleic Acids Res. 28:2446–2454.
   PubMedGoogle Scholar
• Lu R, Yang P, Padmakumar S, Misra V. 1998. The herpesvirus transactivator VP16 mimics a human basic domain leucine zipper protein, luman, in its interaction with HCF. J. Virol. 72:6291–6297.
   PubMedGoogle Scholar
• Macfarlan T, et al. 2005. Human THAP7 is a chromatin-associated, histone tail-binding protein that represses transcription via recruitment of HDAC3 and nuclear hormone receptor corepressor. J. Biol. Chem. 280:7346–7358.
   PubMedGoogle Scholar
• Macfarlan T, Parker JB, Nagata K, Chakravarti D. 2006. Thanatos-associated protein 7 associates with template activating factor-Ibeta and inhibits histone acetylation to repress transcription. Mol. Endocrinol. 20:335–347.
   PubMedGoogle Scholar
• Mazars R, et al. 2010. The thap-zinc finger protein thap1 associates with coactivator HCF-1 and O-GLcNAc transferase: a link between DYT6 and DYT3 dystonias. J. Biol. Chem. 285:13364–13371.
   PubMedGoogle Scholar
• Meister G, Tuschl T. 2004. Mechanisms of gene silencing by double-stranded RNA. Nature 431:343–349.
   PubMed Web of Science ®Google Scholar
• Morgenstern JP, Land H. 1990. Advanced mammalian gene transfer: high titre retroviral vectors with multiple drug selection markers and a complementary helper-free packaging cell line. Nucleic Acids Res. 18:3587–3596.
   PubMed Web of Science ®Google Scholar
• Nelson JD, Denisenko O, Bomsztyk K. 2006. Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat. Protoc. 1:179–185.
   PubMed Web of Science ®Google Scholar
• Perissi V, Jepsen K, Glass CK, Rosenfeld MG. 2010. Deconstructing repression: evolving models of co-repressor action. Nat. Rev. Genet. 11:109–123.
   PubMed Web of Science ®Google Scholar
• Provenzani A, et al. 2006. Global alterations in mRNA polysomal recruitment in a cell model of colorectal cancer progression to metastasis. Carcinogenesis 27:1323–1333.
   PubMed Web of Science ®Google Scholar
• Reynolds A, et al. 2004. Rational siRNA design for RNA interference. Nat. Biotechnol. 22:326–330.
   PubMed Web of Science ®Google Scholar
• Roussigne M, Cayrol C, Clouaire T, Amalric F, Girard JP. 2003. THAP1 is a nuclear proapoptotic factor that links prostate-apoptosis-response-4 (Par-4) to PML nuclear bodies. Oncogene 22:2432–2442.
   PubMed Web of Science ®Google Scholar
• Roussigne M, et al. 2003. The THAP domain: a novel protein motif with similarity to the DNA-binding domain of P element transposase. Trends Biochem. Sci. 28:66–69.
   PubMedGoogle Scholar
• Sabogal A, Lyubimov AY, Corn JE, Berger JM, Rio DC. 2010. THAP proteins target specific DNA sites through bipartite recognition of adjacent major and minor grooves. Nat. Struct. Mol. Biol. 17:117–123.
   PubMedGoogle Scholar
• Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
   Google Scholar
• Taft RJ, Pang KC, Mercer TR, Dinger M, Mattick JS. 2010. Non-coding RNAs: regulators of disease. J. Pathol. 220:126–139.
   PubMed Web of Science ®Google Scholar
• Tamiya G. 2009. Transcriptional dysregulation: a cause of dystonia? Lancet Neurol. 8:416–418.
   PubMedGoogle Scholar
• Tyagi S, Chabes AL, Wysocka J, Herr W. 2007. E2F activation of S phase promoters via association with HCF-1 and the MLL family of histone H3K4 methyltransferases. Mol. Cell 27:107–119.
   PubMed Web of Science ®Google Scholar
• Vento MT, et al. 2010. Praf2 is a novel Bcl-xL/Bcl-2 interacting protein with the ability to modulate survival of cancer cells. PLoS One 5:e15636.
   PubMedGoogle Scholar
• Wei JJ, et al. 2006. Ethnic differences in expression of the dysregulated proteins in uterine leiomyomata. Hum. Reprod. 21:57–67.
   PubMedGoogle Scholar
• Wysocka J, Myers MP, Laherty CD, Eisenman RN, Herr W. 2003. Human Sin3 deacetylase and trithorax-related Set1/Ash2 histone H3-K4 methyltransferase are tethered together selectively by the cell-proliferation factor HCF-1. Genes Dev. 17:896–911.
   PubMed Web of Science ®Google Scholar
• Wysocka J, Reilly PT, Herr W. 2001. Loss of HCF-1-chromatin association precedes temperature-induced growth arrest of tsBN67 cells. Mol. Cell. Biol. 21:3820–3829.
   PubMed Web of Science ®Google Scholar
• Yu H, et al. 2010. The ubiquitin carboxyl hydrolase BAP1 forms a ternary complex with YY1 and HCF-1 and is a critical regulator of gene expression. Mol. Cell. Biol. 30:5071–5085.
   PubMed Web of Science ®Google Scholar
• Zhu CY, et al. 2009. Cell growth suppression by thanatos-associated protein 11 (THAP11) is mediated by transcriptional downregulation of c-Myc. Cell Death Differ. 16:395–405.
   PubMedGoogle Scholar