4
Views
16
CrossRef citations to date
0
Altmetric
Research Article

Mutation Avoidance and DNA Repair Proficiency in Ustilago maydis Are Differentially Lost with Progressive Truncation of the REC1 Gene Product

, , , &
Pages 5329-5338 | Received 07 Apr 1995, Accepted 01 Jul 1995, Published online: 30 Mar 2023

REFERENCES

  • Alani, E., R. A. G. Reenan, and R. D. Kolodner. 1994. Interaction between mismatch repair and genetic recombination in Saccharomyces cerevisiae. Genetics 137:19–39.
  • Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403–410.
  • Banuett, F., and I. Herskowitz. 1994. Morphological transitions in the life cycle of Ustilago maydis and their genetic control by the a and b loci. Exp. Mycol. 18:247–266.
  • Beese, L. S., and T. A. Steitz. 1991. Structural basis for the 39359 exonucle-ase activity of Escherichia coli DNA polymerase I: a two metal ion mechanism. EMBO J. 10:25–33.
  • Bernad, A., L. Blanco, J. M. Lazaro, G. Martin, and M. Salas. 1989. A conserved 39359 exonuclease active site in prokaryotic and eukaryotic DNA polymerases. Cell 59:219–228.
  • Blanco, L., A. Bernad, and M. Salas. 1991. Evidence favouring the hypothesis of a conserved 39359 exonuclease active site in DNA-dependent DNA polymerases. Gene 112:139–144.
  • Cooper, D. L., R. S. Lahue, and P. Modrich. 1993. Methyl-directed mismatch repair is bidirectional. J. Biol. Chem. 268:11823–11829.
  • Derbyshire, V., N. D. F. Grindley, and C. M. Joyce. 1991. The 39359 exo-nuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. EMBO J. 10:17–24.
  • Enoch, T., A. M. Carr, and P. Nurse. 1992. Fission yeast genes involved in coupling mitosis to completion of DNA replication. Genes Dev. 6:2035–2046.
  • Feinberg, A. P., and B. Vogelstein. 1983. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132:6–13.
  • Fotheringham, S., and W. K. Holloman. 1989. Cloning and disruption of Ustilago maydis genes. Mol. Cell. Biol. 9:4052–4055.
  • Fotheringham, S., and W. K. Holloman. 1990. Pathways of transformation in Ustilago maydis determined by DNA conformation. Genetics 124:833–843.
  • Goodman, M. F., S. Creighton, L. B. Bloom, and J. Petruska. 1993. Biochemical basis of DNA replication fidelity. Crit. Rev. Biochem. Mol. Biol. 28:83–126.
  • Gurr, S. J., S. E. Unkles, and J. R. Kinghorn. 1987. The structure and organization of nuclear genes of filamentous fungi, p. 93–139. In J. R. Kinghom (ed.), Gene structure in eukaryotic microbes (Soc. Gen. Microbiol. Spec. Publ. 23). IRL Press, Oxford.
  • Holden, D. W., A. Spanos, and G. R. Banks. 1989. Nucleotide sequence of the REC1 gene of Ustilago maydis. Nucleic Acids Res. 17:10489.
  • Holliday, R. 1964. A mechanism for gene conversion in fungi. Genet. Res. 5:282–304.
  • Holliday, R. 1965. Radiation sensitive mutants of Ustilago maydis. Mutat. Res. 2:557–559.
  • Holliday, R. 1967. Altered recombination frequencies in radiation sensitive strains of Ustilago maydis. Mutat. Res. 4:275–288.
  • Holliday, R., R. E. Halliwell, M. W. Evans, and V. Rowell. 1976. Genetic characterization of rec-1, a mutant of Ustilago maydis defective in repair and recombination. Genet. Res. 27:413–453.
  • Holliday, R., S. Y. Taylor, E. B. Kmiec, and W. K. Holloman. 1984. Biochemical characterization of rec1 mutants and the genetic control of recombination in Ustilago maydis. Cold Spring Harbor Symp. Quant. Biol. 49:669–673.
  • Ito, J., and D. K. Braithwaite. 1991. Compilation and alignment of DNA polymerase sequences. Nucleic Acids Res. 19:4045–4057.
  • Jacquier, A., J. R. Rodriguez, and M. Rosbash. 1985. A quantitative analysis of the effects of 59 junction and TACTAAC box mutants and mutant combinations on yeast mRNA splicing. Cell 43:423–430.
  • Joho, K. E., M. K. Darby, E. T. Crawford, and D. D. Brown. 1990. A finger protein structurally similar to TFIIIA that binds exclusively to 5S RNA in Xenopus. Cell 61:293–300.
  • Kmiec, E. B., A. Cole, and W. K. Holloman. 1994. The REC2 gene encodes the homologous pairing protein of Ustilago maydis. Mol. Cell. Biol. 14:7163–7172.
  • Kramer, W., B. Kramer, M. S. Williamson, and S. Fogel. 1989. Cloning and nucleotide sequence of DNA mismatch repair gene PMS1 from Saccharo-myces cerevisiae: homology of PMS1 to prokaryotic MutL and HexB. J. Bacteriol. 171:5339–5346.
  • Kunkel, T. A. 1992. DNA replication fidelity. J. Biol. Chem. 267:18251–18254.
  • Lea, D. E., and C. A. Coulsen. 1949. The distribution of the numbers of mutants in bacteria populations. J. Genet. 49:264–285.
  • Long, K. E., P. Sunnerhagen, and S. Subramani. 1994. The Schizosaccaro-myces pombe rad1 gene consists of three exons and the cDNA sequence is partially homologous to the Ustilago maydis REC1 cDNA. Gene 148:155–159.
  • Martinez, H. M. 1988. A flexible sequence alignment program. Nucleic Acids Res. 16:1683–1691.
  • Miller, J., A. D. McLaughlan, and A. Klug. 1985. Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes. EMBO J. 4:1609–1614.
  • Modrich, P. 1991. Mechanisms and biological effects of mismatch repair. Annu. Rev. Genet. 25:229–353.
  • Pearson, W. R., and D. J. Lipman. 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85:2444–2448.
  • Prolla, T. A., D. M. Christie, and R. M. Liskay. 1994. Dual requirement in yeast DNA mismatch repair for MLH1 and PMS1, two homologs of the bacterial mutL gene. Mol. Cell. Biol. 14:407–415.
  • Reenan, R. A. G., and R. D. Kolodner. 1992. Characterization of insertion mutations in the Saccharomyces cerevisiae MSH1 and MSH2 genes: evidence for separate mitochondrial and nuclear functions. Genetics 132:975–985.
  • Roberts, B. 1989. Nuclear location signal-mediated protein transport. Bio-chim. Biophys. Acta 1008:263–280.
  • Rowley, R., S. Subramani, and P. G. Young. 1992. Checkpoint controls in Schizosaccharomyces pombe rad1. EMBO J. 11:1335–1342.
  • Rubin, B. R., D. S. Li, and W. K. Holloman. 1994. The LEU1 gene of Ustilago maydis. Gene 140:131–135.
  • Scheuermann, R. H., and H. Echols. 1984. A separate editing exonuclease for DNA replication: the ε subunit of Escherichia coli DNA polymerase III holoenzyme. Proc. Natl. Acad. Sci. USA 81:7747–7751.
  • Studier, F. W., and B. A. Moffatt. 1986. Use of bacteriophage T7 RNA polymerase to direct selective high level expression of cloned genes. J. Mol. Biol. 189:113–130.
  • Studier, F. W., A. H. Rosenberg, J. J. Dunn, and J. W. Dubendorff. 1990. Use of T7 RNA polymerase to direct the expression of cloned genes. Methods Enzymol. 185:60–89.
  • Sunnerhagen, P., B. L. Seaton, A. Nasim, and S. Subramani. 1990. Cloning and analysis of a gene involved in DNA repair and recombination, the rad1 gene of Schizosaccharomyces pombe. Mol. Cell. Biol. 10:3750–3760.
  • Szankasi, P., and G. R. Smith. 1995. A role for exonuclease I from S. pombe in mutation avoidance and mismatch correction. Science 267:1166–1169.
  • Tabor, S., and C. C. Richardson. 1987. DNA sequence analysis with a modified bacteriophage T7 DNA polymerase. Proc. Natl. Acad. Sci. USA 84:4767–4771.
  • Thelen, M., K. Onel, and W. K. Holloman. 1994. The REC1 gene of Ustilago maydis involved in the cellular response to DNA damage encodes an exo-nuclease. J. Biol. Chem. 269:747–754.
  • Toneguzzo, R., S. Glynn, W. Levi, S. Mjolsness, and A. Hayday. 1988. Use of a chemically modified T7 DNA polymerase for manual and automated sequencing of supercoiled DNA. Biotechniques 6:460–469.
  • Tsukuda, T., R. Bauchwitz, and W. K. Holloman. 1989. Isolation of the REC1 gene controlling recombination in Ustilago maydis. Gene 85:335–341.
  • Tsukuda, T., S. Carleton, S. Fotheringham, and W. K. Holloman. 1988. Isolation and characterization of an autonomously replicating sequence from Ustilago maydis. Mol. Cell. Biol. 8:3703–3709.
  • van de Sande, J. H., K. Kleppe, and H. G. Khorana. 1973. Reversal of bacteriophage T4 induced polynucleotide kinase action. Biochemistry 12: 5050–5055.
  • Williamson, M. S., J. C. Game, and S. Fogel. 1985. Meiotic gene conversion mutants in Saccharomyces cerevisiae. I. Isolation and characterization of pms1-1 and pms1-2. Genetics 110:609–646.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.