A Uve1p-Mediated Mismatch Repair Pathway in Schizosaccharomyces pombe

REFERENCES

• Alleva, J. L., and J. Doetsch 1998. Characterization of Schizosaccharomyces pombe Rad2 protein, a FEN-1 homolog. Nucleic Acids Res. 26:3645–3650.
   PubMedGoogle Scholar
• Alleva, J. L., and P. W. Doetsch. Unpublished data.
   Google Scholar
• Avery, A. M., B. Kaur, J. S. Taylor, J. A. Mello, J. M. Essigmann, and P. W. Doetsch. Substrate specificity of ultraviolet DNA endonuclease (UVDE/Uve1p) from Schizosaccharomyces pombe. Nucleic Acids Res., in press.
   Google Scholar
• Bowman, K. K., K. Sidik, C. A. Smith, J. S. Taylor, P. W. Doetsch, and J. Freyer 1994. A new ATP-independent DNA endonuclease from Schizosaccharomyces pombe that recognizes cyclobutane pyrimidine dimers and 6-4 photoproducts. Nucleic Acids Res. 22:3026–3032.
   PubMedGoogle Scholar
• Bronner, C. E., S. M. Baker, P. T. Morrison, G. Warren, L. G. Smith, M. K. Lescoe, M. Kane, C. Earabino, J. Lipford, and J. Lindblom 1994. Mutation in the DNA mismatch repair gene homologue hMLH1 is associated with hereditary non-polyposis colon cancer. Nature 368:258–261.
   PubMed Web of Science ®Google Scholar
• Chang, D. Y., and J. Lu 1991. Base mismatch-specific endonuclease activity in extracts from Saccharomyces cerevisiae. Nucleic Acids Res. 19:4761–4766.
   PubMedGoogle Scholar
• Crouse, G. F. 1998. Mismatch repair systems in Saccharomyces cerevisiae, p. 411–448 In J. A. Nickoloff, M. F. Hoekstra (ed.), DNA repair in prokaryotes and lower eukaryotes, vol. 1. DNA damage and repair. Humana Press, Inc., Totowa, N.J.
   Google Scholar
• Davey, S., M. L. Nass, J. V. Ferrer, K. Sidik, A. Eisenberger, D. L. Mitchell, and J. Freyer 1997. The fission yeast UVDR DNA repair pathway is inducible. Nucleic Acids Res. 25:1002–1008.
   PubMedGoogle Scholar
• Davey, S., C. S. Han, S. A. Ramer, J. C. Klassen, A. Jacobsen, A. Eisenberger, K. M. Hopkins, H. B. Lieberman, and J. Freyer 1998. Fission yeast rad12+ regulates cell cycle checkpoint control and is homologous to the Bloom’s syndrome disease gene. Mol. Cell. Biol. 18:2721–2728.
   PubMed Web of Science ®Google Scholar
• Doetsch, P. W. 1994. What’s old is new: an alternative DNA excision repair pathway. Trends Biochem. Sci. 20:384–386.
   Google Scholar
• Fang, W. H., and J. Modrich 1993. Human strand-specific mismatch repair occurs by a bidirectional mechanism similar to that of the bacterial reaction. J. Biol. Chem. 268:11838–11844.
   PubMedGoogle Scholar
• Fantes, P., and J. Creanor 1984. Canavanine resistance and the mechanism of arginine uptake in the fission yeast Schizosaccharomyces pombe. J. Gen. Microbiol. 130:3265–3273.
   PubMedGoogle Scholar
• Fishel, R., M. K. Lescoe, M. R. Rao, N. G. Copeland, N. A. Jenkins, J. Garber, M. Kane, and J. Kolodner 1993. The human mutator gene homolog MSH2 and its association with hereditary nonpolyposis colon cancer. Cell 75:1027–1038.
   PubMed Web of Science ®Google Scholar
• Fleck, O., H. Michael, and J. Heim 1992. The swi4+ gene of Schizosaccharomyces pombe encodes a homologue of mismatch repair enzymes. Nucleic Acids Res. 20:2271–2278.
   PubMedGoogle Scholar
• Fleck, O., P. Schar, and J. Kohli 1994. Identification of two mismatch-binding activities in protein extracts of Schizosaccharomyces pombe. Nucleic Acids Res. 22:5289–5295.
   PubMedGoogle Scholar
• Fleck, O., E. Lehmann, P. Schar, and J. Kohli 1999. Involvement of nucleotide excision repair in msh2 pms1-independent mismatch repair. Nat. Genet. 21:314–317.
   PubMedGoogle Scholar
• Freyer, G. A., S. Davey, J. V. Ferrer, A. M. Martin, D. Beach, and J. Doetsch 1995. An alternative eukaryotic DNA excision repair pathway. Mol. Cell. Biol. 15:4572–4577.
   PubMed Web of Science ®Google Scholar
• Hennecke, F., H. Kolmar, K. Brundl, and J. Fritz 1991. The vsr gene product of E. coli K-12 is a strand- and sequence-specific DNA mismatch endonuclease. Nature 353:776–778.
   PubMedGoogle Scholar
• Jing, Y., J. F. Kao, and J. Taylor 1998. Thermodynamic and base-pairing studies of matched and mismatched DNA dodecamer duplexes containing cis-syn, (6-4) and Dewar photoproducts of TT. Nucleic Acids Res. 26:3845–3853.
   PubMedGoogle Scholar
• Kaur, B., A. M. Avery, and J. Doetsch 1998. Expression, purification, and characterization of ultraviolet endonuclease from Schizosaccharomyces pombe. Biochemistry 37:11599–11604.
   PubMedGoogle Scholar
• Kaur, B., and P. W. Doetsch. Unpublished data.
   Google Scholar
• Kolodner, R. D. 1995. Mismatch repair: mechanisms and relationship to cancer susceptibility. Trends Biochem. Sci. 20:397–401.
   PubMed Web of Science ®Google Scholar
• Lea, D. E., and J. Coulson 1943. The distribution of the numbers of mutants in bacterial populations. J. Genet. 49:264–284.
   Google Scholar
• Leupold, U. 1970. Genetical methods for Schizosaccharomyces pombe. Methods Cell Physiol. 4:169–177.
   Google Scholar
• Lieb, M., E. Allen, and J. Read 1986. Very short patch mismatch repair in phage lambda: repair sites and length of repair tracts. Genetics 114:1041–1060.
   PubMedGoogle Scholar
• Lieb, M. 1987. Bacterial genes mutL, mutS, and dcm participate in repair of mismatches at 5-methylcytosine sites. J. Bacteriol. 169:5241–5246.
   PubMed Web of Science ®Google Scholar
• McCready, S., A. M. Carr, and J. Lehmann 1993. Repair of cyclobutane pyrimidine dimers and 6-4 photoproducts in the fission yeast Schizosaccharomyces pombe. Mol. Microbiol. 10:885–890.
   PubMedGoogle Scholar
• Modrich, P. 1991. Mechanisms and biological effects of mismatch repair. Annu. Rev Genet. 25:229–253.
   PubMed Web of Science ®Google Scholar
• Modrich, P., and J. Lahue 1996. Mismatch repair in replication fidelity, genetic recombination, and cancer biology. Annu. Rev. Biochem. 65:101–133.
   PubMed Web of Science ®Google Scholar
• Modrich, P. 1997. Strand-specific mismatch repair in mammalian cells. J. Biol. Chem. 272:24727–24730.
   PubMed Web of Science ®Google Scholar
• Nicolaides, N. C., N. Papadopoulos, B. Liu, Y. F. Wei, K. C. Carter, S. Ruben, C. A. Rosen, W. A. Haseltine, R. D. Fleischmann, and J. Fraser 1994. Mutations of two PMS homologues in hereditary nonpolyposis colon cancer. Nature 371:75–80.
   PubMed Web of Science ®Google Scholar
• Porello, S. L., A. E. Leyes, and J. David 1998. Single turnover and pre-steady-state kinetics of the reaction of the adenine glycosylase MutY with mismatch containing DNA substrates. Biochemistry 37:14756–14764.
   PubMedGoogle Scholar
• Radman, M., C. Dohet, M. Jones, M. P. Doutriaux, F. Laengle-Rouault, G. Maenhaut-Michel, and J. Wagner 1985. Processing of mispaired and unpaired bases in heteroduplex DNA in E. coli. Biochimie 67:745–752.
   PubMedGoogle Scholar
• Schar, P., and J. Kohli 1993. Marker effects of G to C transversions on intragenic recombination and mismatch repair in Schizosaccharomyces pombe. Genetics 133:825–835.
   PubMedGoogle Scholar
• Schar, P., P. Munz, and J. Kohli 1993. Meiotic mismatch repair quantified on the basis of segregation patterns in Schizosaccharomyces pombe. Genetics 133:815–824.
   PubMedGoogle Scholar
• Schar, P., M. Baur, C. Schneider, and J. Kohli 1997. Mismatch repair in Schizosaccharomyces pombe requires the mutL homologous gene pms1: molecular cloning and functional analysis. Genetics 146:1275–1286.
   PubMedGoogle Scholar
• Su, S. S., R. S. Lahue, K. G. Au, and J. Modrich 1988. Mispair specificity of methyl-directed DNA mismatch correction in vitro. J. Biol. Chem. 263:6829–6835.
   PubMed Web of Science ®Google Scholar
• Szankasi, P., and J. Smith 1992. A DNA exonuclease induced during meiosis of Schizosaccharomyces pombe. J. Biol. Chem. 267:3014–3023.
   PubMed Web of Science ®Google Scholar
• Szankasi, P., and J. Smith 1992. A single-stranded DNA exonuclease from Schizosaccharomyces pombe. Biochemistry 31:6769–6773.
   PubMedGoogle Scholar
• Szankasi, P., and J. Smith 1995. A role for exonuclease I from S. pombe in mutation avoidance and mismatch correction. Science 267:1166–1169.
   PubMed Web of Science ®Google Scholar
• Takao, M., R. Yonemasu, K. Yamamoto, and J. Yasui 1996. Characterization of a UV endonuclease gene from the fission yeast Schizosaccharomyces pombe and its bacterial homolog. Nucleic Acids Res. 24:1267–1271.
   PubMedGoogle Scholar
• Yajima, H., M. Takao, S. Yasuhira, J. H. Zhao, C. Ishii, H. Inoue, and J. Yasui 1995. A eukaryotic gene encoding an endonuclease that specifically repairs DNA damaged by ultraviolet light. EMBO J. 14:2393–2399.
   PubMedGoogle Scholar
• Yao, M., and J. Kow 1994. Strand-specific cleavage of mismatch-containing DNA by deoxyinosine 3′-endonuclease from Escherichia coli. J. Biol. Chem. 269:31390–31396.
   PubMedGoogle Scholar
• Yao, M., and J. Kow 1997. Further characterization of Escherichia coli endonuclease V. J. Biol. Chem. 272:30774–30779.
   PubMedGoogle Scholar
• Yasui, A., and J. McCready 1998. Alternative repair pathways for UV-induced DNA damage. Bioessays 20:291–297.
   PubMedGoogle Scholar
• Yeh, Y. C., D. Y. Chang, J. Masin, and J. Lu 1991. Two nicking enzyme systems specific for mismatch-containing DNA in nuclear extracts from human cells. J. Biol. Chem. 266:6480–6484.
   PubMedGoogle Scholar
• Yeh, Y. C., H. F. Liu, C. A. Ellis, and J. Lu 1994. Mammalian topoisomerase I has base mismatch nicking activity. J. Biol. Chem. 269:15498–15504.
   PubMedGoogle Scholar
• Yonemasu, R., S. J. McCready, J. M. Murray, F. Osman, M. Takao, K. Yamamoto, A. R. Lehman, and J. Yasui 1997. Characterization of the alternative excision repair pathway of UV-damaged DNA in Schizosaccharomyces pombe. Nucleic Acids Res. 25:1553–1558.
   PubMedGoogle Scholar
• Zell, R., and J. Fritz 1987. DNA mismatch-repair in Escherichia coli counteracting the hydrolytic deamination of 5-methyl-cytosine residues. EMBO J. 6:1809–1815.
   PubMed Web of Science ®Google Scholar